RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 IGKV1-17P01599 117 aa6□□□□□ -1.45
VPS11-209ENST00000622309 WT1P19544 449 aaPredicted RBP6□□□□□ -1.45
VPS11-209ENST00000622309 RPL18AQ02543 176 aaKnown RBP6□□□□□ -1.45
VPS11-209ENST00000622309 DYNLRB1Q9NP97 96 aa6□□□□□ -1.45
VPS11-209ENST00000622309 APC2O95996 2303 aa6□□□□□ -1.45
VPS11-209ENST00000622309 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
VPS11-209ENST00000622309 FAM201AQ5SY85 155 aa6□□□□□ -1.45
VPS11-209ENST00000622309 DPH3P1Q9H4G8 78 aa6□□□□□ -1.45
VPS11-209ENST00000622309 TRGV5A0A0B4J1U4 118 aa6□□□□□ -1.45
VPS11-209ENST00000622309 SYNJ2BPP57105 145 aa6□□□□□ -1.45
VPS11-209ENST00000622309 PVRIGQ6DKI7 326 aa6□□□□□ -1.45
VPS11-209ENST00000622309 IGFL2Q6UWQ7 119 aa6□□□□□ -1.45
VPS11-209ENST00000622309 ZNF491Q8N8L2 437 aa6□□□□□ -1.45
VPS11-209ENST00000622309 SPRR3Q9UBC9 169 aa6□□□□□ -1.45
VPS11-209ENST00000622309 TRBV7-1A0A0A6YYK4 115 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 IGLV2-23P01705 113 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 IGFL4Q6B9Z1 124 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 ZNF575Q86XF7 245 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 FDCSPQ8NFU4 85 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 TMEM200BQ69YZ2 307 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 RELNP78509 3460 aa5.99□□□□□ -1.45
VPS11-209ENST00000622309 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 TRAV12-3A0A0B4J271 114 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 IGKV3D-20A0A0C4DH25 116 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 LEPROTO15243 131 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 MGPP08493 103 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 RPL39LQ96EH5 51 aaKnown RBP5.98□□□□□ -1.45
VPS11-209ENST00000622309 AMELXQ99217 191 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 CCL13Q99616 98 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 TP53TG1Q9Y2A0 90 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 IGHV3-72A0A0B4J1Y9 119 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 IGHV1-2P23083 117 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 NPC2P61916 151 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 DEFB109BQ30KR1 87 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 TIMM21Q9BVV7 248 aa5.98□□□□□ -1.45
VPS11-209ENST00000622309 I3L3M4 83 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 K7ENP7 123 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 HIST1H4AP62805 103 aaKnown RBP5.97□□□□□ -1.45
VPS11-209ENST00000622309 MED13LQ71F56 2210 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 IGHV1-69DA0A0B4J2H0 117 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 I3L2K1 104 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 SDIM1Q6ZPB5 146 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 NAV2Q8IVL1 2488 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 M0R381 172 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 DCANP1Q8TF63 244 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 ZNF462Q96JM2 2506 aa5.97□□□□□ -1.45
VPS11-209ENST00000622309 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
VPS11-209ENST00000622309 C9orf85Q96MD7 179 aa5.96□□□□□ -1.46
VPS11-209ENST00000622309 Q9UF83 564 aa5.96□□□□□ -1.46
VPS11-209ENST00000622309 SERTAD4-AS1Q5TG53 156 aa5.96□□□□□ -1.46
VPS11-209ENST00000622309 C9orf139Q6ZV77 190 aa5.96□□□□□ -1.46
VPS11-209ENST00000622309 DYNAPQ8N1N2 210 aa5.96□□□□□ -1.46
VPS11-209ENST00000622309 DEFB104AQ8WTQ1 72 aa5.96□□□□□ -1.46
VPS11-209ENST00000622309 MYO18BQ8IUG5 2567 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 IGHV7-4-1A0A0J9YVY3 117 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 SDHAF1A6NFY7 115 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 PPP1R17O96001 155 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 UPK3BQ9BT76 320 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 LINC00574Q9H8X3 128 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 WNK2Q9Y3S1 2297 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 A0A0J9YXY3 114 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 TSHBP01222 138 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 CCL3L1P16619 93 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 DAZ2Q13117 558 aaKnown RBP5.95□□□□□ -1.46
VPS11-209ENST00000622309 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 DAZ4Q86SG3 579 aaKnown RBP5.95□□□□□ -1.46
VPS11-209ENST00000622309 DAZ1Q9NQZ3 744 aaKnown RBP5.95□□□□□ -1.46
VPS11-209ENST00000622309 DAZ3Q9NR90 486 aaKnown RBP5.95□□□□□ -1.46
VPS11-209ENST00000622309 S4R3C0 116 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 KALRNO60229 2985 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 AVPP01185 164 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 S100A4P26447 101 aaKnown RBP5.95□□□□□ -1.46
VPS11-209ENST00000622309 LINC00311Q8N616 119 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 PSMG3-AS1Q96PY0 264 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 C11orf21Q9P2W6 132 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 RNF7Q9UBF6 113 aa5.95□□□□□ -1.46
VPS11-209ENST00000622309 TENM4Q6N022 2769 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 ABCA4P78363 2273 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 IGIPA6NJ69 53 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 NDUFC2O95298 119 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 ZNF876PQ49A33 203 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 Q6ZSV7 163 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 MRPL55Q7Z7F7 128 aaKnown RBP5.94□□□□□ -1.46
VPS11-209ENST00000622309 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 DAND5Q8N907 189 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 GAFA1Q96PS6 74 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 SPTBN1Q01082 2364 aaKnown RBP5.94□□□□□ -1.46
VPS11-209ENST00000622309 IGHV4-4A0A075B6R2 117 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 M0R1B8 84 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 IGF1P05019 195 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 RPL39P62891 51 aaKnown RBP5.94□□□□□ -1.46
VPS11-209ENST00000622309 MRGPRG-AS1Q2M3A8 158 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 TMEM243Q9BU79 118 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 BSNQ9UPA5 3926 aa5.94□□□□□ -1.46
VPS11-209ENST00000622309 USP17L23D6RBM5 183 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms