RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 M0R2P5 195 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 RHODO00212 210 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 RBMY1DP0C7P1 496 aaKnown RBP7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 SLURP1P55000 103 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 DEFB131AP59861 70 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 ZNF415Q09FC8 603 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 NDUFA11Q86Y39 141 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 ATP6V0E2Q8NHE4 81 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 CLUHP3Q96NS8 147 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 MRPL16Q9NX20 251 aaKnown RBP7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 PEMTQ9UBM1 199 aa7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 SPTAN1Q13813 2472 aaKnown RBP7.04□□□□□ -1.28
IGHV3-54-201ENST00000622166 MAPK1IP1LQ8NDC0 245 aa7.03□□□□□ -1.28
IGHV3-54-201ENST00000622166 C4orf3Q8WVX3 66 aa7.03□□□□□ -1.28
IGHV3-54-201ENST00000622166 FAM104AQ969W3 186 aa7.03□□□□□ -1.28
IGHV3-54-201ENST00000622166 DNAJC30Q96LL9 226 aa7.03□□□□□ -1.28
IGHV3-54-201ENST00000622166 SPXQ9BT56 116 aa7.03□□□□□ -1.28
IGHV3-54-201ENST00000622166 VCX2Q9H322 139 aa7.03□□□□□ -1.28
IGHV3-54-201ENST00000622166 PRRC2AP48634 2157 aaKnown RBP7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 A0A0J9YXV3 536 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 CFC1BP0CG36 223 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 CFC1P0CG37 223 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 CFAP126Q5VTH2 177 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 C18orf65Q6ZTR6 163 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 TMEM86BQ8N661 226 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 DUX3Q96PT4 197 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 SPTBN4Q9H254 2564 aa7.02□□□□□ -1.29
IGHV3-54-201ENST00000622166 TRBV20-1A0A075B6N2 111 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 RS1O15537 224 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 APOMO95445 188 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 SCGB1A1P11684 91 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 MRPS36P82909 103 aaKnown RBP7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 DEFB113Q30KQ7 82 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 ETDBQ3ZM63 59 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 SH2D6Q7Z4S9 175 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 SBSPONQ8IVN8 264 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 TMEM61Q8N0U2 210 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 C10orf126Q8N4M7 172 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 SPATA25Q9BR10 227 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 SPANXA1Q9NS26 97 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 TNFRSF18Q9Y5U5 241 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 DOPEY1Q5JWR5 2465 aa7.01□□□□□ -1.29
IGHV3-54-201ENST00000622166 TRAV25A0A0B4J276 109 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 A0A0B4J2C4 111 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 IGHV3-53P01767 116 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 CD28P10747 220 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 PROK1P58294 105 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 DEFB136Q30KP8 78 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 DEFB114Q30KQ6 69 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 RAX2Q96IS3 184 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 CHCHD7Q9BUK0 85 aa7□□□□□ -1.29
IGHV3-54-201ENST00000622166 NACAE9PAV3 2078 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 LOC107984156A0A0G2JMH3 177 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 A0A0J9YXY3 114 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 TMEM238C9JI98 176 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 IGHV3-33P01772 117 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 PSMB2P49721 201 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 Q6ZSN1 163 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 ARL17AQ8IVW1 177 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 DYNLRB2Q8TF09 96 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 TMEM263Q8WUH6 116 aaKnown RBP6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 SIGMAR1Q99720 223 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 C1QTNF4Q9BXJ3 329 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 TSSC4Q9Y5U2 329 aaPredicted RBP6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 NCOR2Q9Y618 2525 aa6.99□□□□□ -1.29
IGHV3-54-201ENST00000622166 DOPEY2Q9Y3R5 2298 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 A4D1N5 150 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 M0QXV9 152 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 TCL1BO95988 128 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 INSP01308 110 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 IGHV3-30-3P0DP02 117 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 KRTAP10-9P60411 292 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 TEX29Q8N6K0 151 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 LINC01587Q99440 93 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 TIMM21Q9BVV7 248 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
IGHV3-54-201ENST00000622166 ITPR1Q14643 2758 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 IGHV3-73A0A0B4J1V6 119 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 FOXI1Q12951 378 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 PKD1L2Q7Z442 2459 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 KRTAP1-3Q8IUG1 177 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 MUSTN1Q8IVN3 82 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 LITAFQ99732 161 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 SPANXDQ9BXN6 97 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 SPANXCQ9NY87 97 aa6.97□□□□□ -1.29
IGHV3-54-201ENST00000622166 CSPG4Q6UVK1 2322 aa6.96□□□□□ -1.29
IGHV3-54-201ENST00000622166 PRB1P04280 392 aa6.96□□□□□ -1.3
IGHV3-54-201ENST00000622166 HTN1P15515 57 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms