RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 USP17L23D6RBM5 183 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 OXTP01178 125 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 GAGE6Q13070 117 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 PRR27Q6MZM9 219 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 CLPSL2Q6UWE3 100 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 SFT2D1Q8WV19 159 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 TCEAL7Q9BRU2 100 aa6.04□□□□□ -1.44
TARDBP-227ENST00000622057 SCO2A0A1W2PP80 73 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 G3V3Q6 166 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 SMLR1H3BR10 107 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 SNAI2O43623 268 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 PFDN1O60925 122 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 S100A9P06702 114 aaKnown RBP6.03□□□□□ -1.44
TARDBP-227ENST00000622057 PRSS1P07477 247 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 SMIM17P0DL12 118 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 RPL37AP61513 92 aaKnown RBP6.03□□□□□ -1.44
TARDBP-227ENST00000622057 PKIAP61925 76 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 MIAQ16674 131 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 NTM-AS1Q6ZSK4 140 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 FAM213BQ8TBF2 198 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 DERL1Q9BUN8 251 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 MLST8Q9BVC4 326 aa6.03□□□□□ -1.44
TARDBP-227ENST00000622057 SSBP4Q9BWG4 385 aaPredicted RBP6.03□□□□□ -1.44
TARDBP-227ENST00000622057 CXCL1P09341 107 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 RBX1P62877 108 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 TMEM97Q5BJF2 176 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 TMUB2Q71RG4 321 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 LINC00269Q8N2A0 174 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 MBD3L1Q8WWY6 194 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 HMCN2Q8NDA2 5059 aa6.02□□□□□ -1.45
TARDBP-227ENST00000622057 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
TARDBP-227ENST00000622057 MGPP08493 103 aa6.01□□□□□ -1.45
TARDBP-227ENST00000622057 OR5AL1P0C617 328 aa6.01□□□□□ -1.45
TARDBP-227ENST00000622057 KCNRGQ8N5I3 272 aa6.01□□□□□ -1.45
TARDBP-227ENST00000622057 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
TARDBP-227ENST00000622057 DPH3Q96FX2 82 aa6.01□□□□□ -1.45
TARDBP-227ENST00000622057 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
TARDBP-227ENST00000622057 IGLV10-54A0A075B6I4 117 aa6□□□□□ -1.45
TARDBP-227ENST00000622057 H2AFB1P0C5Y9 115 aa6□□□□□ -1.45
TARDBP-227ENST00000622057 GZMBP10144 247 aa6□□□□□ -1.45
TARDBP-227ENST00000622057 DAZAP1Q96EP5 407 aaKnown RBP6□□□□□ -1.45
TARDBP-227ENST00000622057 PRR34Q9NV39 138 aa6□□□□□ -1.45
TARDBP-227ENST00000622057 VAX2Q9UIW0 290 aa6□□□□□ -1.45
TARDBP-227ENST00000622057 PLA2G2DQ9UNK4 145 aa6□□□□□ -1.45
TARDBP-227ENST00000622057 KIF25-AS1Q9Y6Z4 181 aa6□□□□□ -1.45
TARDBP-227ENST00000622057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6□□□□□ -1.45
TARDBP-227ENST00000622057 IGHV1-24A0A0C4DH33 117 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 UMAD1C9J7I0 102 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 PANO1I0J062 215 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 RPL35P42766 123 aaKnown RBP5.99□□□□□ -1.45
TARDBP-227ENST00000622057 RAB5CP51148 216 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 HNRNPA3P51991 378 aaKnown RBP5.99□□□□□ -1.45
TARDBP-227ENST00000622057 REG3AQ06141 175 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 KRTAP26-1Q6PEX3 210 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 AP1S3Q96PC3 154 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 UBR4Q5T4S7 5183 aa5.99□□□□□ -1.45
TARDBP-227ENST00000622057 KANTRA0A1W2PQU2 76 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 hDV102S1A0JD36 115 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 M0QY20 66 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 NKX2-5P52952 324 aaPredicted RBP5.98□□□□□ -1.45
TARDBP-227ENST00000622057 IQCJQ1A5X6 159 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 RGS21Q2M5E4 152 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 SUMO4Q6EEV6 95 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 CLRN3Q8NCR9 226 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
TARDBP-227ENST00000622057 IGLV4-60A0A075B6I1 120 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 A0A0D9SG52 128 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 H7C1H1 209 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 CCL20P78556 96 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 ZNF345Q14585 488 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 FER1L6-AS1Q8NA97 138 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 C20orf203Q8NBC4 194 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 OR2D3Q8NGH3 330 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 AP5S1Q9NUS5 200 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 GNG13Q9P2W3 67 aa5.97□□□□□ -1.45
TARDBP-227ENST00000622057 TRAV8-4A0A0B4J246 113 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 RAB19A4D1S5 217 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 HMSDA8MTL9 139 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 BCL2L11O43521 198 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 P01737 135 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 IGLC6P0CF74 106 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 RPS20P60866 119 aaKnown RBP5.96□□□□□ -1.46
TARDBP-227ENST00000622057 CACNG7P62955 275 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 EIF5AP63241 154 aaKnown RBP5.96□□□□□ -1.46
TARDBP-227ENST00000622057 RASL11AQ6T310 242 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 TMEM243Q9BU79 118 aa5.96□□□□□ -1.46
TARDBP-227ENST00000622057 IGHV3-64A0A075B6Q5 118 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 A0A1B0GUV1 79 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 UBE2L6O14933 153 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 SLPIP03973 132 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 CENPWQ5EE01 88 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 LYZL1Q6UWQ5 148 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 GFRA4Q9GZZ7 299 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 MANBALQ9NQG1 85 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 NIT2Q9NQR4 276 aa5.95□□□□□ -1.46
TARDBP-227ENST00000622057 A0A087WYN8 130 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms