RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 TMEM70Q9BUB7 260 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 CRXO43186 299 aaPredicted RBP9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 C12orf57Q99622 126 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 TEX48A0A1B0GUV7 120 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 BATFQ16520 125 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 Q6ZWC4 215 aa9.1□□□□□ -0.95
SCAMP1-207ENST00000621999 TMEM170BQ5T4T1 132 aa9.09□□□□□ -0.95
SCAMP1-207ENST00000621999 PAM16Q9Y3D7 125 aa9.09□□□□□ -0.95
SCAMP1-207ENST00000621999 K7EQD1 137 aa9.09□□□□□ -0.95
SCAMP1-207ENST00000621999 SNAI2O43623 268 aa9.09□□□□□ -0.95
SCAMP1-207ENST00000621999 IFI27L1Q96BM0 104 aa9.09□□□□□ -0.95
SCAMP1-207ENST00000621999 GAGE6Q13070 117 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 Q8N8P6 123 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 TRBV25-1A0A075B6N4 114 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 SVEP1Q4LDE5 3571 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 C2orf88Q9BSF0 95 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 TRAV26-1A0A087WT03 109 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 A0A1B0GXF2 115 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 LYRM9A8MSI8 78 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 HERVK_113P61574 105 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 C2orf66Q6UXQ4 117 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 GATD1Q8NB37 220 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
SCAMP1-207ENST00000621999 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 IGLL5B9A064 214 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 RBMY1A1P0DJD3 496 aaKnown RBP9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 RBMY1CP0DJD4 496 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 RBMY1FQ15415 496 aaKnown RBP9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 PRO0255Q9UI72 69 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 Q0VG73 95 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 A0A0J9YWU9 116 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 NMUP48645 174 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 LGALS9BQ3B8N2 356 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 ATP6V0E2Q8NHE4 81 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
SCAMP1-207ENST00000621999 CRPP02741 224 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 CFAP126Q5VTH2 177 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 HIST1H2BLQ99880 126 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 TRAV8-6A0A0B4J262 113 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 PRO1933Q9H354 126 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 HIST3H2BBQ8N257 126 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
SCAMP1-207ENST00000621999 TRBV7-3A0A075B6L6 115 aa9.05□□□□□ -0.96
SCAMP1-207ENST00000621999 DEFB131BA0A096LNP1 70 aa9.05□□□□□ -0.96
SCAMP1-207ENST00000621999 C9orf85Q96MD7 179 aa9.05□□□□□ -0.96
SCAMP1-207ENST00000621999 TOMM7Q9P0U1 55 aa9.05□□□□□ -0.96
SCAMP1-207ENST00000621999 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
SCAMP1-207ENST00000621999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 COX8CQ7Z4L0 72 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 RNF183Q96D59 192 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 C5orf52A6NGY3 159 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 SCGB1D4Q6XE38 83 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 NBEAL2Q6ZNJ1 2754 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 IFITM10A6NMD0 228 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 SLC25A29Q8N8R3 303 aa9.04□□□□□ -0.96
SCAMP1-207ENST00000621999 NANOS2P60321 138 aaKnown RBP9.03□□□□□ -0.96
SCAMP1-207ENST00000621999 TEX43Q6ZNM6 134 aa9.03□□□□□ -0.96
SCAMP1-207ENST00000621999 RNASE8Q8TDE3 154 aaKnown RBP9.03□□□□□ -0.96
SCAMP1-207ENST00000621999 DAZ2Q13117 558 aaKnown RBP9.03□□□□□ -0.96
SCAMP1-207ENST00000621999 CLPSL2Q6UWE3 100 aa9.03□□□□□ -0.96
SCAMP1-207ENST00000621999 MUC4Q99102 2169 aa9.02□□□□□ -0.97
SCAMP1-207ENST00000621999 CRYGDP07320 174 aa9.02□□□□□ -0.97
SCAMP1-207ENST00000621999 IGHV1-24A0A0C4DH33 117 aa9.02□□□□□ -0.97
SCAMP1-207ENST00000621999 RASL10AQ92737 203 aa9.02□□□□□ -0.97
SCAMP1-207ENST00000621999 CLUHP3Q96NS8 147 aa9.02□□□□□ -0.97
SCAMP1-207ENST00000621999 ANGP03950 147 aaKnown RBP9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 DNAJC30Q96LL9 226 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 FAM19A4Q96LR4 140 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 SBSPONQ8IVN8 264 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 IGHV3-64A0A075B6Q5 118 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 RS1O15537 224 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 GAS8-AS1O95177 125 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 LINC00469Q8N7U9 141 aa9.01□□□□□ -0.97
SCAMP1-207ENST00000621999 NUPR1O60356 82 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 LOC100131303A0A0U1RQF7 123 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 LINC01549A6NIU2 74 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 CIDEAO60543 219 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 MALP21145 153 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 CCL18P55774 89 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 TMEM97Q5BJF2 176 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 DAZ4Q86SG3 579 aaKnown RBP9□□□□□ -0.97
SCAMP1-207ENST00000621999 DAZ3Q9NR90 486 aaKnown RBP9□□□□□ -0.97
SCAMP1-207ENST00000621999 DKK2Q9UBU2 259 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 RPL39P62891 51 aaKnown RBP9□□□□□ -0.97
SCAMP1-207ENST00000621999 RNF185Q96GF1 192 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 ZFHX3Q15911 3703 aa9□□□□□ -0.97
SCAMP1-207ENST00000621999 TRBV10-1A0A0K0K1A3 114 aa8.99□□□□□ -0.97
SCAMP1-207ENST00000621999 M0QY20 66 aa8.99□□□□□ -0.97
SCAMP1-207ENST00000621999 ZFP2Q6ZN57 461 aa8.99□□□□□ -0.97
SCAMP1-207ENST00000621999 SPATA45Q537H7 98 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms