RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 LINC00311Q8N616 119 aa7.62□□□□□ -1.19
COL4A6-210ENST00000621266 NOTCH4Q99466 2003 aa7.62□□□□□ -1.19
COL4A6-210ENST00000621266 PATE2Q6UY27 113 aa7.62□□□□□ -1.19
COL4A6-210ENST00000621266 CEMP1Q6PRD7 247 aaPredicted RBP7.62□□□□□ -1.19
COL4A6-210ENST00000621266 WFDC10BQ8IUB3 73 aa7.62□□□□□ -1.19
COL4A6-210ENST00000621266 K7ERS5 55 aa7.61□□□□□ -1.19
COL4A6-210ENST00000621266 PRAC2D3DTV9 90 aa7.61□□□□□ -1.19
COL4A6-210ENST00000621266 MRPS12O15235 138 aaKnown RBP7.61□□□□□ -1.19
COL4A6-210ENST00000621266 ZFHX2Q9C0A1 2572 aaPredicted RBP7.61□□□□□ -1.19
COL4A6-210ENST00000621266 WNK2Q9Y3S1 2297 aa7.61□□□□□ -1.19
COL4A6-210ENST00000621266 RSPO1Q2MKA7 263 aaPredicted RBP7.61□□□□□ -1.19
COL4A6-210ENST00000621266 IGF2-ASQ6U949 168 aa7.61□□□□□ -1.19
COL4A6-210ENST00000621266 COX7BP24311 80 aa7.61□□□□□ -1.19
COL4A6-210ENST00000621266 DEFB136Q30KP8 78 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 A0A0J9YXY3 114 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 RITA1Q96K30 269 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 DENND4AQ7Z401 1863 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 ZFP36P26651 326 aaKnown RBP7.6□□□□□ -1.19
COL4A6-210ENST00000621266 PCNX1Q96RV3 2341 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 ABCA1O95477 2261 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 NDUFA1O15239 70 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 CREBBPQ92793 2442 aa7.6□□□□□ -1.19
COL4A6-210ENST00000621266 DOCK7Q96N67 2140 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 PDE6GP18545 87 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 IGFL2Q6UWQ7 119 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 LRRC75A-AS1Q8N1F1 130 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 SERP2Q8N6R1 65 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 TMEM263Q8WUH6 116 aaKnown RBP7.59□□□□□ -1.19
COL4A6-210ENST00000621266 TM2D2Q9BX73 214 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 CADP27708 2225 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 PRR15LQ9BU68 103 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 EML6Q6ZMW3 1958 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 IGHV4-38-2P0DP08 117 aa7.59□□□□□ -1.19
COL4A6-210ENST00000621266 HOXB4P17483 251 aaPredicted RBP7.59□□□□□ -1.19
COL4A6-210ENST00000621266 LRCOL1A6NCL2 159 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 MUC6Q6W4X9 2439 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 IGHV4-61A0A0C4DH41 118 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 KAAG1Q9UBP8 84 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 FAM167A-AS1Q96KT0 104 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 SMIM9A6NGZ8 99 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 I3L2K1 104 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 TRIAP1O43715 76 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 DYSFO75923 2080 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 TRBV7-3A0A075B6L6 115 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 ATP5EP56381 51 aaPredicted RBP7.58□□□□□ -1.2
COL4A6-210ENST00000621266 DEFB1P60022 68 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 SPAG11BQ08648 103 aa7.58□□□□□ -1.2
COL4A6-210ENST00000621266 TRBV27A0A0K0K1C4 114 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 CENPVL3A0A0U1RRI6 287 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 INAFM1C9JVW0 142 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 IGLV3-1P01715 115 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 CTRLP40313 264 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 BLCAPP62952 87 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 C16orf74Q96GX8 76 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 PCNX2A6NKB5 2137 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 COX7CP15954 63 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 XGP55808 180 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 BDP1A6H8Y1 2624 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 SLURP1P55000 103 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.57□□□□□ -1.22e-8■■■■■ 31.6
COL4A6-210ENST00000621266 ZFAND3Q9H8U3 227 aa7.57□□□□□ -1.2
COL4A6-210ENST00000621266 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
COL4A6-210ENST00000621266 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
COL4A6-210ENST00000621266 RNF138Q8WVD3 245 aa7.56□□□□□ -1.2
COL4A6-210ENST00000621266 CCL24O00175 119 aa7.56□□□□□ -1.2
COL4A6-210ENST00000621266 ATP5EP2Q5VTU8 51 aa7.56□□□□□ -1.2
COL4A6-210ENST00000621266 GDF5OSQ5U4N7 250 aa7.56□□□□□ -1.2
COL4A6-210ENST00000621266 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
COL4A6-210ENST00000621266 K7EIM0 57 aa7.56□□□□□ -1.2
COL4A6-210ENST00000621266 A0A096LNI7 61 aa7.55□□□□□ -1.2
COL4A6-210ENST00000621266 INSL3P51460 131 aa7.55□□□□□ -1.2
COL4A6-210ENST00000621266 NDUFC1O43677 76 aa7.55□□□□□ -1.2
COL4A6-210ENST00000621266 ARHGAP21Q5T5U3 1957 aa7.55□□□□□ -1.2
COL4A6-210ENST00000621266 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
COL4A6-210ENST00000621266 C19orf84I3L1E1 186 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 SPRNQ5BIV9 151 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 P0DMU3 169 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 FAM231AP0DMU4 169 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 FAM231CP0DMU5 169 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 VPREB3Q9UKI3 123 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 IGKV1-17P01599 117 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 C3orf84H3BNL1 204 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 C20orf203Q8NBC4 194 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 MDFICQ9P1T7 246 aa7.54□□□□□ -1.2
COL4A6-210ENST00000621266 PLA2G2AP14555 144 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 AJUBAQ96IF1 538 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 FAM30AQ9NZY2 134 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 C19orf71A6NCJ1 209 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 LTBP2Q14767 1821 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 H3BUA1 57 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 CTSGP08311 255 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 KLK12Q9UKR0 248 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 FAM208BQ5VWN6 2430 aa7.53□□□□□ -1.2
COL4A6-210ENST00000621266 NOTCH3Q9UM47 2321 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms