RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 NEXN-AS1Q8NBZ9 246 aa7.46□□□□□ -1.22
CPNE3-210ENST00000621245 NKX6-2Q9C056 277 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-210ENST00000621245 TRIAP1O43715 76 aa7.45□□□□□ -1.22
CPNE3-210ENST00000621245 SSTP61278 116 aa7.45□□□□□ -1.22
CPNE3-210ENST00000621245 ATRAIDQ6UW56 229 aa7.45□□□□□ -1.22
CPNE3-210ENST00000621245 ENHOQ6UWT2 76 aa7.45□□□□□ -1.22
CPNE3-210ENST00000621245 FAM213BQ8TBF2 198 aa7.45□□□□□ -1.22
CPNE3-210ENST00000621245 MLST8Q9BVC4 326 aa7.45□□□□□ -1.22
CPNE3-210ENST00000621245 URGCP-MRPS24S4R325 110 aa7.45□□□□□ -1.22
CPNE3-210ENST00000621245 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 RBFOX3A6NFN3 312 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 ZNF56Q15929 161 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 PRR27Q6MZM9 219 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 KCNRGQ8N5I3 272 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 OR10G8Q8NGN5 311 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 STOML3Q8TAV4 291 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 SFT2D1Q8WV19 159 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 DERL1Q9BUN8 251 aa7.44□□□□□ -1.22
CPNE3-210ENST00000621245 A0A087WX48 190 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 TRBV10-1A0A0K0K1A3 114 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 SNAI2O43623 268 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 RPL36AP83881 106 aaKnown RBP7.43□□□□□ -1.22
CPNE3-210ENST00000621245 DGAT2L7PQ6IED9 249 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 C15orf54Q8N8G6 183 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 Q8N976 141 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 CIRBP-AS1Q8TBR5 109 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 MBD3L1Q8WWY6 194 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 RPL36ALQ969Q0 106 aaKnown RBP7.43□□□□□ -1.22
CPNE3-210ENST00000621245 KIF25-AS1Q9Y6Z4 181 aa7.43□□□□□ -1.22
CPNE3-210ENST00000621245 GZMBP10144 247 aa7.42□□□□□ -1.22
CPNE3-210ENST00000621245 RAB4BP61018 213 aa7.42□□□□□ -1.22
CPNE3-210ENST00000621245 CCL20P78556 96 aa7.42□□□□□ -1.22
CPNE3-210ENST00000621245 RGS21Q2M5E4 152 aa7.42□□□□□ -1.22
CPNE3-210ENST00000621245 TCEAL7Q9BRU2 100 aa7.42□□□□□ -1.22
CPNE3-210ENST00000621245 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
CPNE3-210ENST00000621245 TMEM262E9PQX1 116 aa7.41□□□□□ -1.22
CPNE3-210ENST00000621245 ZNF345Q14585 488 aa7.41□□□□□ -1.22
CPNE3-210ENST00000621245 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
CPNE3-210ENST00000621245 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
CPNE3-210ENST00000621245 RMI2Q96E14 147 aa7.41□□□□□ -1.22
CPNE3-210ENST00000621245 CHCHD7Q9BUK0 85 aa7.41□□□□□ -1.22
CPNE3-210ENST00000621245 ZNF471Q9BX82 626 aaPredicted RBP7.41□□□□□ -1.22
CPNE3-210ENST00000621245 KRTAP29-1A8MX34 341 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-210ENST00000621245 USP17L23D6RBM5 183 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 PANO1I0J062 215 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 BCL2L11O43521 198 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 HLA-DQA1P01909 254 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 CXCL1P09341 107 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 SEC11BP0C7V7 166 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 RPL35P42766 123 aaKnown RBP7.4□□□□□ -1.22
CPNE3-210ENST00000621245 HNRNPA3P51991 378 aaKnown RBP7.4□□□□□ -1.22
CPNE3-210ENST00000621245 DEFB104AQ8WTQ1 72 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 COX11Q9Y6N1 276 aa7.4□□□□□ -1.22
CPNE3-210ENST00000621245 ANGP03950 147 aaKnown RBP7.39□□□□□ -1.23
CPNE3-210ENST00000621245 PRSS1P07477 247 aa7.39□□□□□ -1.23
CPNE3-210ENST00000621245 OR5AL1P0C617 328 aa7.39□□□□□ -1.23
CPNE3-210ENST00000621245 GAGE6Q13070 117 aa7.39□□□□□ -1.23
CPNE3-210ENST00000621245 CHCHD5Q9BSY4 110 aa7.39□□□□□ -1.23
CPNE3-210ENST00000621245 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 PFDN1O60925 122 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 CRPP02741 224 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 IGLC6P0CF74 106 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 RBX1P62877 108 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 ELOBQ15370 118 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 CENPWQ5EE01 88 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 SPANXN1Q5VSR9 72 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 TMUB2Q71RG4 321 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 GFRA4Q9GZZ7 299 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 GNG13Q9P2W3 67 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 VAX2Q9UIW0 290 aa7.38□□□□□ -1.23
CPNE3-210ENST00000621245 RAB19A4D1S5 217 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 HMSDA8MTL9 139 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 UMAD1C9J7I0 102 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 S100A9P06702 114 aaKnown RBP7.37□□□□□ -1.23
CPNE3-210ENST00000621245 MGPP08493 103 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 Q0VG73 95 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 KCNIP4Q6PIL6 250 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 LINC00269Q8N2A0 174 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 C11orf52Q96A22 123 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 TPPP3Q9BW30 176 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 PRR34Q9NV39 138 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 LRP2P98164 4655 aa7.37□□□□□ -1.23
CPNE3-210ENST00000621245 TRBV20OR9-2A0A075B6H5 130 aa7.36□□□□□ -1.23
CPNE3-210ENST00000621245 IGLV10-54A0A075B6I4 117 aa7.36□□□□□ -1.23
CPNE3-210ENST00000621245 KANTRA0A1W2PQU2 76 aa7.36□□□□□ -1.23
CPNE3-210ENST00000621245 C19orf71A6NCJ1 209 aa7.36□□□□□ -1.23
CPNE3-210ENST00000621245 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
CPNE3-210ENST00000621245 M0QY20 66 aa7.36□□□□□ -1.23
CPNE3-210ENST00000621245 AP1S3Q96PC3 154 aa7.36□□□□□ -1.23
CPNE3-210ENST00000621245 A0A0D9SG52 128 aa7.35□□□□□ -1.23
CPNE3-210ENST00000621245 C20orf203Q8NBC4 194 aa7.35□□□□□ -1.23
CPNE3-210ENST00000621245 DAZAP1Q96EP5 407 aaKnown RBP7.35□□□□□ -1.23
CPNE3-210ENST00000621245 IGLV4-60A0A075B6I1 120 aa7.34□□□□□ -1.23
CPNE3-210ENST00000621245 NKX2-5P52952 324 aaPredicted RBP7.34□□□□□ -1.23
CPNE3-210ENST00000621245 MIAQ16674 131 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms