RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZNF491Q8N8L2 437 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 TCF20Q9UGU0 1960 aaKnown RBP3.86□□□□□ -1.79
VPS13D-214ENST00000620676 IGLV10-54A0A075B6I4 117 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 IGKV1D-37A0A075B6S9 117 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 ELANEP08246 267 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 K7EM74 188 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 STHQ8IWL8 128 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 PIP4P2Q8N4L2 257 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 MED12LQ86YW9 2145 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 SND1-IT1Q9HBX3 110 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 C5orf67F2Z3F1 127 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 PDE6HQ13956 83 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 NEXN-AS1Q8NBZ9 246 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 BUB3O43684 328 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 NDUFS5O43920 106 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 COX7CP15954 63 aa3.86□□□□□ -1.79
VPS13D-214ENST00000620676 MRPL14Q6P1L8 145 aaKnown RBP3.86□□□□□ -1.79
VPS13D-214ENST00000620676 MBD3L4A6NDZ8 208 aaPredicted RBP3.85□□□□□ -1.79
VPS13D-214ENST00000620676 MBD3L3A6NE82 208 aaPredicted RBP3.85□□□□□ -1.79
VPS13D-214ENST00000620676 MBD3L5A6NJ08 208 aaPredicted RBP3.85□□□□□ -1.79
VPS13D-214ENST00000620676 MRPL53Q96EL3 112 aaKnown RBP3.85□□□□□ -1.79
VPS13D-214ENST00000620676 Q6Q795 121 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 TRBV7-3A0A075B6L6 115 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 IGLV2-23P01705 113 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 IGHV3-33P01772 117 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 A0A0J9YY99 117 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 PRM2P04554 102 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 NCKAP5O14513 1909 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 TRBV7-1A0A0A6YYK4 115 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 RPL18AQ02543 176 aaKnown RBP3.85□□□□□ -1.79
VPS13D-214ENST00000620676 SMCPP49901 116 aaPredicted RBP3.85□□□□□ -1.79
VPS13D-214ENST00000620676 CRIPAKQ8N1N5 446 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 PLXNB3Q9ULL4 1909 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 C20orf173Q96LM9 149 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 A0A087WZ39 114 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 CEP192Q8TEP8 1941 aa3.85□□□□□ -1.79
VPS13D-214ENST00000620676 HILS1P60008 231 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 USP9YO00507 2555 aaPredicted RBP3.84□□□□□ -1.79
VPS13D-214ENST00000620676 ANKRD11Q6UB99 2663 aaPredicted RBP3.84□□□□□ -1.79
VPS13D-214ENST00000620676 F8WEM9 126 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 TICRRQ7Z2Z1 1910 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 P0C879 139 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 CMC4P56277 68 aaPredicted RBP3.84□□□□□ -1.79
VPS13D-214ENST00000620676 ODF3Q96PU9 254 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 ZNF580Q9UK33 172 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 ATP6V0E1O15342 81 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 I3L2K1 104 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 HHLA3Q9XRX5 114 aa3.84□□□□□ -1.79
VPS13D-214ENST00000620676 PRR3P79522 188 aaKnown RBP3.84□□□□□ -1.79
VPS13D-214ENST00000620676 CHKB-CPT1BH3BT56 60 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 PMAIP1Q13794 54 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 ALPK3Q96L96 1907 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 FAM240AA0A1B0GVK7 77 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 KRTAP27-1Q3LI81 207 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 PRR19A6NJB7 356 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 VWA8A3KMH1 1905 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 WISP2O76076 250 aa3.84□□□□□ -1.8
VPS13D-214ENST00000620676 IGLV3-12A0A075B6K2 115 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 HIST2H2BCQ6DN03 193 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 HIST2H2BDQ6DRA6 164 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 KIAA1549LQ6ZVL6 1849 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 IGLV3-19P01714 112 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 TSPEAR-AS2P59090 65 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 PROK1P58294 105 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 K7EIM0 57 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 LINC00526Q96FQ7 95 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 DEFB131AP59861 70 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 OBSL1O75147 1896 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 ADAMTSL4-AS1Q5T5F5 129 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 SIRPDQ9H106 197 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 NRXN2Q9P2S2 1712 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 TEX22C9J3V5 150 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 ZFAND3Q9H8U3 227 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 MIAQ16674 131 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 FHL3Q13643 280 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 IL17DQ8TAD2 202 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 DCANP1Q8TF63 244 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 IGLV3-9A0A075B6K5 115 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 SS18Q15532 418 aa3.83□□□□□ -1.8
VPS13D-214ENST00000620676 H3BT86 120 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 FAM30AQ9NZY2 134 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 C7orf69Q9H7B7 122 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 FAM19A1Q7Z5A9 133 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 MAPK1IP1LQ8NDC0 245 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 PLXNA4Q9HCM2 1894 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 ESM1Q9NQ30 184 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 COX7A2LO14548 114 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 FASNP49327 2511 aaKnown RBP3.82□□□□□ -1.8
VPS13D-214ENST00000620676 CTSGP08311 255 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 NREPQ16612 68 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 DEFB136Q30KP8 78 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 FAM19A4Q96LR4 140 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 CDK2AP2O75956 126 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV4-30-2A0A087WSY4 118 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 SAA4P35542 130 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 NRACQ8N912 160 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 PRR14LQ5THK1 2151 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 APRG1Q8IVJ8 170 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms