RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 CCL19Q99731 98 aa11.96□□□□□ -0.5
DKC1-213ENST00000620277 PRO0461Q9UI25 63 aa11.96□□□□□ -0.5
DKC1-213ENST00000620277 A0A0J9YY99 117 aa11.95□□□□□ -0.5
DKC1-213ENST00000620277 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
DKC1-213ENST00000620277 KHDC1LQ5JSQ8 128 aa11.95□□□□□ -0.5
DKC1-213ENST00000620277 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
DKC1-213ENST00000620277 HERVK_113P61574 105 aa11.95□□□□□ -0.5
DKC1-213ENST00000620277 VCYO14598 125 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 MT-ATP8P03928 68 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 CFC1P0CG37 223 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 TAL2Q16559 108 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 Q6ZSV7 163 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 TRAV8-3A0A0A6YYJ7 113 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 IGHV3-16A0A0C4DH30 117 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 J3QQQ9 107 aa11.94□□□□□ -0.5
DKC1-213ENST00000620277 TMEM238LA0A1B0GVL6 79 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 A4D1N5 150 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 IGIPA6NJ69 53 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 A6NJY4 79 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 NDUFA11Q86Y39 141 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 PRSS47A8MTI9 375 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 FOXI1Q12951 378 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 FHL3Q13643 280 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 KIF25-AS1Q9Y6Z4 181 aa11.93□□□□□ -0.5
DKC1-213ENST00000620277 COX6B1P14854 86 aa11.92□□□□□ -0.5
DKC1-213ENST00000620277 PIMREGQ9BSJ6 248 aa11.92□□□□□ -0.5
DKC1-213ENST00000620277 IGHG2P01859 326 aa11.92□□□□□ -0.5
DKC1-213ENST00000620277 NBEAL2Q6ZNJ1 2754 aa11.92□□□□□ -0.5
DKC1-213ENST00000620277 IGHV3OR16-12A0A075B7B8 117 aa11.92□□□□□ -0.5
DKC1-213ENST00000620277 C11orf44Q8N8P7 122 aa11.92□□□□□ -0.5
DKC1-213ENST00000620277 DAND5Q8N907 189 aa11.92□□□□□ -0.5
DKC1-213ENST00000620277 C9JAW5 83 aa11.91□□□□□ -0.5
DKC1-213ENST00000620277 ID1P41134 155 aa11.91□□□□□ -0.5
DKC1-213ENST00000620277 POLR2KP53803 58 aaKnown RBP11.91□□□□□ -0.5
DKC1-213ENST00000620277 SPINK8P0C7L1 97 aa11.91□□□□□ -0.5
DKC1-213ENST00000620277 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
DKC1-213ENST00000620277 DCANP1Q8TF63 244 aa11.91□□□□□ -0.5
DKC1-213ENST00000620277 LENEPQ9Y5L5 61 aa11.91□□□□□ -0.5
DKC1-213ENST00000620277 CKS1BP61024 79 aa11.9□□□□□ -0.5
DKC1-213ENST00000620277 CFAP126Q5VTH2 177 aa11.9□□□□□ -0.5
DKC1-213ENST00000620277 DEFB112Q30KQ8 113 aa11.9□□□□□ -0.5
DKC1-213ENST00000620277 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
DKC1-213ENST00000620277 NOTCH2Q04721 2471 aa11.9□□□□□ -0.5
DKC1-213ENST00000620277 ELANEP08246 267 aa11.9□□□□□ -0.51
DKC1-213ENST00000620277 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.51
DKC1-213ENST00000620277 USMG5Q96IX5 58 aa11.9□□□□□ -0.51
DKC1-213ENST00000620277 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
DKC1-213ENST00000620277 VCX2Q9H322 139 aa11.89□□□□□ -0.51
DKC1-213ENST00000620277 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 A6NDX4 124 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 UBE2D1P51668 147 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 KLLNB2CW77 178 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 MSMBP08118 114 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 XGP55808 180 aa11.88□□□□□ -0.51
DKC1-213ENST00000620277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
DKC1-213ENST00000620277 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
DKC1-213ENST00000620277 M0QY20 66 aa11.87□□□□□ -0.51
DKC1-213ENST00000620277 UCNP55089 124 aa11.87□□□□□ -0.51
DKC1-213ENST00000620277 SNRPD3P62318 126 aaKnown RBP11.87□□□□□ -0.51
DKC1-213ENST00000620277 ANKRD29Q8N6D5 301 aa11.87□□□□□ -0.51
DKC1-213ENST00000620277 CLUHP3Q96NS8 147 aa11.87□□□□□ -0.51
DKC1-213ENST00000620277 CD28P10747 220 aa11.87□□□□□ -0.51
DKC1-213ENST00000620277 PRO1854Q9UHT4 67 aa11.87□□□□□ -0.51
DKC1-213ENST00000620277 DEFB131AP59861 70 aa11.86□□□□□ -0.51
DKC1-213ENST00000620277 FAM19A4Q96LR4 140 aa11.86□□□□□ -0.51
DKC1-213ENST00000620277 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
DKC1-213ENST00000620277 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 IGHV1OR15-1A0A075B7D0 117 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 A0A087WW49 117 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 A8MWV9 139 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 EIF4EBP3O60516 100 aaPredicted RBP11.85□□□□□ -0.51
DKC1-213ENST00000620277 CIDEAO60543 219 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 C10orf105Q8TEF2 133 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 PPP1R17O96001 155 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 RBMY1A1P0DJD3 496 aaKnown RBP11.85□□□□□ -0.51
DKC1-213ENST00000620277 RBMY1CP0DJD4 496 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 SLURP1P55000 103 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 RBMY1FQ15415 496 aaKnown RBP11.85□□□□□ -0.51
DKC1-213ENST00000620277 APRG1Q8IVJ8 170 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 C10orf126Q8N4M7 172 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 CDIP1Q9H305 208 aa11.85□□□□□ -0.51
DKC1-213ENST00000620277 SLC25A29Q8N8R3 303 aa11.84□□□□□ -0.51
DKC1-213ENST00000620277 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
DKC1-213ENST00000620277 A0A0J9YX75 114 aa11.84□□□□□ -0.51
DKC1-213ENST00000620277 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
DKC1-213ENST00000620277 SPATA25Q9BR10 227 aa11.83□□□□□ -0.52
DKC1-213ENST00000620277 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
DKC1-213ENST00000620277 ERG28Q9UKR5 140 aa11.83□□□□□ -0.52
DKC1-213ENST00000620277 Q6ZSN1 163 aa11.83□□□□□ -0.52
DKC1-213ENST00000620277 TRBV27A0A0K0K1C4 114 aa11.82□□□□□ -0.52
DKC1-213ENST00000620277 SLC25A20O43772 301 aa11.82□□□□□ -0.52
DKC1-213ENST00000620277 IGLV1-40P01703 118 aa11.82□□□□□ -0.52
DKC1-213ENST00000620277 NTN5Q8WTR8 489 aaPredicted RBP11.82□□□□□ -0.52
DKC1-213ENST00000620277 GEMIN7Q9H840 131 aaKnown RBP11.82□□□□□ -0.52
DKC1-213ENST00000620277 HIVEP2P31629 2446 aa11.81□□□□□ -0.52
DKC1-213ENST00000620277 A0A1B0GV72 72 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms