RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 RAB19A4D1S5 217 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 RHODO00212 210 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 SIVA1O15304 175 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 SRIP30626 198 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 RPL35P42766 123 aaKnown RBP5.03□□□□□ -1.6
CBWD1-228ENST00000619157 RAB5CP51148 216 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 LINC00315P59091 139 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 NEGR1Q7Z3B1 354 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 BAGE2Q86Y30 109 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 C14orf178Q8N769 122 aaPredicted RBP5.03□□□□□ -1.6
CBWD1-228ENST00000619157 MANBALQ9NQG1 85 aa5.03□□□□□ -1.6
CBWD1-228ENST00000619157 A0A1W2PPQ1 181 aa5.02□□□□□ -1.61
CBWD1-228ENST00000619157 CRYGDP07320 174 aa5.02□□□□□ -1.61
CBWD1-228ENST00000619157 S100A4P26447 101 aaKnown RBP5.02□□□□□ -1.61
CBWD1-228ENST00000619157 OR10AG1Q8NH19 301 aa5.02□□□□□ -1.61
CBWD1-228ENST00000619157 MUC21A0A0G2JKD1 596 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 MUC21A0A140T8X8 626 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 C19orf71A6NCJ1 209 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 A8MWV9 139 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 DNAH10OSP0CZ25 163 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 BCL2P10415 239 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 MEF2BQ02080 365 aaPredicted RBP5.01□□□□□ -1.61
CBWD1-228ENST00000619157 RHOHQ15669 191 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 CENPWQ5EE01 88 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 TTC32Q5I0X7 151 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 PRR27Q6MZM9 219 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 ALKAL2Q6UX46 152 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 ZFP2Q6ZN57 461 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 SFRP2Q96HF1 295 aa5.01□□□□□ -1.61
CBWD1-228ENST00000619157 GAGE12JA6NER3 117 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 M0R381 172 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 SNAI2O43623 268 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 CIDEAO60543 219 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 S100A9P06702 114 aaKnown RBP5□□□□□ -1.61
CBWD1-228ENST00000619157 CXCL1P09341 107 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 GZMBP10144 247 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 MGST1P10620 155 aaKnown RBP5□□□□□ -1.61
CBWD1-228ENST00000619157 BTF3P20290 206 aaKnown RBP5□□□□□ -1.61
CBWD1-228ENST00000619157 FUSP35637 526 aaKnown RBP eCLIP5□□□□□ -1.61
CBWD1-228ENST00000619157 GAGE1Q13065 139 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 GAGE4Q13068 117 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 GAGE5Q13069 117 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 SOHLH1Q5JUK2 328 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 EIF5AL1Q6IS14 154 aaKnown RBP5□□□□□ -1.61
CBWD1-228ENST00000619157 LYPD6BQ8NI32 183 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 PCNPQ8WW12 178 aaKnown RBP5□□□□□ -1.61
CBWD1-228ENST00000619157 TXNDC17Q9BRA2 123 aa5□□□□□ -1.61
CBWD1-228ENST00000619157 RBFOX3A6NFN3 312 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 K7EN84 100 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 IGLC6P0CF74 106 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 FAM74A4Q5TZK3 123 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 PRADC1Q9BSG0 188 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 PHLDA3Q9Y5J5 127 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 LY96Q9Y6Y9 160 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 KIF25-AS1Q9Y6Z4 181 aa4.99□□□□□ -1.61
CBWD1-228ENST00000619157 PDE6DO43924 150 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 OR5AL1P0C617 328 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 LINC01556Q5JQF7 62 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 LELP1Q5T871 98 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 ZFP82Q8N141 532 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 ATP6V0E2Q8NHE4 81 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 GTSF1LQ9H1H1 148 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 MED9Q9NWA0 146 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 VAX2Q9UIW0 290 aa4.98□□□□□ -1.61
CBWD1-228ENST00000619157 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 IGHV3-38A0A0C4DH36 116 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 PRSS2P07478 247 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 GNG4P50150 75 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 SSTP61278 116 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 SH2D6Q7Z4S9 175 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 SPATA12Q7Z6I5 190 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 DNAJC30Q96LL9 226 aa4.97□□□□□ -1.61
CBWD1-228ENST00000619157 VPS13BQ7Z7G8 4022 aa4.96□□□□□ -1.61
CBWD1-228ENST00000619157 IBA57-AS1B1ANH7 110 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 TEX46H3BTG2 121 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 IFNA1P01562 189 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 IGHV3-30P01768 117 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 IGHV3-33P01772 117 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 IGHV3-30-3P0DP02 117 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 UBE2D3P61077 147 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 UBE2D2P62837 147 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 OR10J3Q5JRS4 329 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 NEXN-AS1Q8NBZ9 246 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 OR2D3Q8NGH3 330 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 OCC1Q8TAD7 63 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 SMIM12Q96EX1 92 aa4.96□□□□□ -1.62
CBWD1-228ENST00000619157 RNASE7Q9H1E1 156 aaKnown RBP4.96□□□□□ -1.62
CBWD1-228ENST00000619157 A0A087WTM6 91 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 LRCOL1A6NCL2 159 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 EVI2AP22794 236 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 WFDC2Q14508 124 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 DAZ4Q86SG3 579 aaKnown RBP4.95□□□□□ -1.62
CBWD1-228ENST00000619157 FER1L6-AS1Q8NA97 138 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 OR10G8Q8NGN5 311 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 GTSF1Q8WW33 167 aa4.95□□□□□ -1.62
CBWD1-228ENST00000619157 DAZ3Q9NR90 486 aaKnown RBP4.95□□□□□ -1.62
CBWD1-228ENST00000619157 TRBV10-1A0A0K0K1A3 114 aa4.94□□□□□ -1.62
CBWD1-228ENST00000619157 C9JQL5 133 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms