RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 LINC01546A6NGU7 62 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 IGHV4-59P01825 116 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 ELANEP08246 267 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 FAM74A4Q5TZK3 123 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 ATP6V0E2Q8NHE4 81 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 GLMPQ8WWB7 406 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 GCN1Q92616 2671 aaKnown RBP5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 ITPR2Q14571 2701 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 UNC79Q9P2D8 2635 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 TRBV7-3A0A075B6L6 115 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 TRAV8-2A0A0B4J237 113 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 SNCGO76070 127 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 C5orf56Q8N8D9 126 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 RPL39LQ96EH5 51 aaKnown RBP5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 DUX5Q96PT3 197 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 TP53TG1Q9Y2A0 90 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 LENEPQ9Y5L5 61 aa5.3□□□□□ -1.56
SRGAP3-213ENST00000618999 SRD5A1P18405 259 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 BLCAPP62952 87 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 C9orf47Q6ZRZ4 202 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 BAALCQ8WXS3 180 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 F8WDY8 70 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 LINC01619G3V211 115 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 INSL3P51460 131 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 PMVKQ15126 192 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 ZFAND6Q6FIF0 208 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 DEFB104AQ8WTQ1 72 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 C11orf21Q9P2W6 132 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 ITPR3Q14573 2671 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 IGLV2-18A0A075B6J9 118 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 ZNF56Q15929 161 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 TEN1Q86WV5 123 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 NEXN-AS1Q8NBZ9 246 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 KLHL30-AS1Q8NEE0 82 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 ZNF256Q9Y2P7 627 aaPredicted RBP5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 CELSR1Q9NYQ6 3014 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 TRAV41A0A0B4J266 112 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 IGHV7-4-1A0A0J9YVY3 117 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 ERG28Q9UKR5 140 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 MYO9AB2RTY4 2548 aa5.29□□□□□ -1.56
SRGAP3-213ENST00000618999 FLNAP21333 2647 aaKnown RBP5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 TRAV2A0A0B4J234 112 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 SEC61GP60059 68 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 TTC32Q5I0X7 151 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 PRO1854Q9UHT4 67 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 FLNBO75369 2602 aaKnown RBP5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 A6NDX4 124 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 C9JAW5 83 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 TSPAN13O95857 204 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 IGHG4P01861 327 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 PRSS2P07478 247 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 ZNF688P0C7X2 276 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 MTORP42345 2549 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 WIPF1O43516 503 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 DUSP14O95147 198 aaKnown RBP5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 COX6CP09669 75 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 CFAP126Q5VTH2 177 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 KRTAP1-3Q8IUG1 177 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 RASL10AQ92737 203 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
SRGAP3-213ENST00000618999 IGHV4-4A0A075B6R2 117 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 TRBV7-9A0A0J9YWB2 115 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 CD7P09564 240 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 PTH2Q96A98 100 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 HIVEP2P31629 2446 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 GAGE2BQ13066 116 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 GAGE2EQ4V326 116 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 ZFP2Q6ZN57 461 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 PLEKHB2Q96CS7 222 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 GAGE2DQ9UEU5 116 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 FAM223BA6NKX1 122 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 IGHV3-11P01762 117 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 MORN3Q6PF18 240 aaPredicted RBP5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 Q6ZUT4 128 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 FAM223AQ8IWN6 122 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 C10orf126Q8N4M7 172 aa5.27□□□□□ -1.57
SRGAP3-213ENST00000618999 VPS13CQ709C8 3753 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 IGHV3-64A0A075B6Q5 118 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 C11orf86A6NJI1 115 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 J3QQQ9 107 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 SLC25A20O43772 301 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 MT-ATP8P03928 68 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 NDUFA11Q86Y39 141 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 SDHAF1A6NFY7 115 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 GNRH2O43555 120 aa5.26□□□□□ -1.57
SRGAP3-213ENST00000618999 CSMD1Q96PZ7 3565 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 TCL1BO95988 128 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 IGHG2P01859 326 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 ATXN8Q156A1 80 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 ANKRD29Q8N6D5 301 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 VPREB3Q9UKI3 123 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 MED14OSP0DP75 135 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 RPL13AP40429 203 aaKnown RBP5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 PRO0461Q9UI25 63 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 SETD2Q9BYW2 2564 aaPredicted RBP5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 TRAV8-4A0A0B4J246 113 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 IGKV3-20P01619 116 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 Q6ZQT7 251 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms