RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 DNAJC30Q96LL9 226 aa11.91□□□□□ -0.5
SBDS-205ENST00000617799 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.5
SBDS-205ENST00000617799 PPBPP02775 128 aa11.9□□□□□ -0.5
SBDS-205ENST00000617799 MT-ND6P03923 174 aa11.9□□□□□ -0.5
SBDS-205ENST00000617799 CAMPP49913 170 aa11.9□□□□□ -0.5
SBDS-205ENST00000617799 LINC00315P59091 139 aa11.9□□□□□ -0.5
SBDS-205ENST00000617799 RPL36AP83881 106 aaKnown RBP11.9□□□□□ -0.5
SBDS-205ENST00000617799 Q6ZSN1 163 aa11.9□□□□□ -0.5
SBDS-205ENST00000617799 RPL36ALQ969Q0 106 aaKnown RBP11.9□□□□□ -0.5
SBDS-205ENST00000617799 ESRGQ1W209 222 aa11.89□□□□□ -0.51
SBDS-205ENST00000617799 FAM104BQ5XKR9 115 aa11.89□□□□□ -0.51
SBDS-205ENST00000617799 LINC00588Q9Y4M8 146 aa11.89□□□□□ -0.51
SBDS-205ENST00000617799 URGCP-MRPS24S4R325 110 aa11.89□□□□□ -0.51
SBDS-205ENST00000617799 HLA-DQA1P01909 254 aa11.88□□□□□ -0.51
SBDS-205ENST00000617799 GNB1LQ9BYB4 327 aa11.88□□□□□ -0.51
SBDS-205ENST00000617799 IGLV2-18A0A075B6J9 118 aa11.87□□□□□ -0.51
SBDS-205ENST00000617799 TRBV7-3A0A075B6L6 115 aa11.87□□□□□ -0.51
SBDS-205ENST00000617799 M0QY20 66 aa11.87□□□□□ -0.51
SBDS-205ENST00000617799 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 RAB4AP20338 218 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 TIRAPP58753 221 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 GAGE1Q13065 139 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 GAGE4Q13068 117 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 GAGE5Q13069 117 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 ELOBQ15370 118 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 SUMO4Q6EEV6 95 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 NIT2Q9NQR4 276 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 LAMTOR2Q9Y2Q5 125 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 MRPS16Q9Y3D3 137 aaKnown RBP11.86□□□□□ -0.51
SBDS-205ENST00000617799 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
SBDS-205ENST00000617799 PHOX2AO14813 284 aa11.85□□□□□ -0.51
SBDS-205ENST00000617799 ATP6V1G1O75348 118 aa11.85□□□□□ -0.51
SBDS-205ENST00000617799 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
SBDS-205ENST00000617799 AMN1Q8IY45 258 aa11.85□□□□□ -0.51
SBDS-205ENST00000617799 M0R2N4 97 aa11.84□□□□□ -0.51
SBDS-205ENST00000617799 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
SBDS-205ENST00000617799 DAZ4Q86SG3 579 aaKnown RBP11.84□□□□□ -0.51
SBDS-205ENST00000617799 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
SBDS-205ENST00000617799 DAZ3Q9NR90 486 aaKnown RBP11.84□□□□□ -0.51
SBDS-205ENST00000617799 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.52
SBDS-205ENST00000617799 CKS2P33552 79 aa11.83□□□□□ -0.52
SBDS-205ENST00000617799 ORMDL3Q8N138 153 aa11.83□□□□□ -0.52
SBDS-205ENST00000617799 ATP6V0E2Q8NHE4 81 aa11.83□□□□□ -0.52
SBDS-205ENST00000617799 RNF185Q96GF1 192 aa11.83□□□□□ -0.52
SBDS-205ENST00000617799 LINC00694P0DN24 101 aa11.82□□□□□ -0.52
SBDS-205ENST00000617799 TMEM136Q6ZRR5 245 aa11.82□□□□□ -0.52
SBDS-205ENST00000617799 NEXN-AS1Q8NBZ9 246 aa11.82□□□□□ -0.52
SBDS-205ENST00000617799 UPK3BQ9BT76 320 aa11.82□□□□□ -0.52
SBDS-205ENST00000617799 Q9UF83 564 aa11.82□□□□□ -0.52
SBDS-205ENST00000617799 VPS13DQ5THJ4 4388 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 TCAPO15273 167 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 APCSP02743 223 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 UBE2D3P61077 147 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 UBE2D2P62837 147 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 MRPL51Q4U2R6 128 aaKnown RBP11.81□□□□□ -0.52
SBDS-205ENST00000617799 OR10J3Q5JRS4 329 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 C20orf78Q9BR46 151 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 Q9H8V8 135 aa11.81□□□□□ -0.52
SBDS-205ENST00000617799 YPEL4Q96NS1 127 aa11.8□□□□□ -0.52
SBDS-205ENST00000617799 GTSF1LQ9H1H1 148 aa11.8□□□□□ -0.52
SBDS-205ENST00000617799 ST20Q9HBF5 79 aa11.8□□□□□ -0.52
SBDS-205ENST00000617799 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
SBDS-205ENST00000617799 SIVA1O15304 175 aa11.79□□□□□ -0.52
SBDS-205ENST00000617799 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
SBDS-205ENST00000617799 CBLN2Q8IUK8 224 aa11.79□□□□□ -0.52
SBDS-205ENST00000617799 PKIAP61925 76 aa11.78□□□□□ -0.52
SBDS-205ENST00000617799 TRAV8-6A0A0B4J262 113 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 NBDYA0A0U1RRE5 68 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 D6R8Y8 96 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 NCR2O95944 276 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 SUMO2P61956 95 aaKnown RBP11.77□□□□□ -0.53
SBDS-205ENST00000617799 WFDC10BQ8IUB3 73 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 PRELID3AQ96N28 172 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 TRAPPC1Q9Y5R8 145 aa11.77□□□□□ -0.53
SBDS-205ENST00000617799 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
SBDS-205ENST00000617799 VCYO14598 125 aa11.76□□□□□ -0.53
SBDS-205ENST00000617799 TTC32Q5I0X7 151 aa11.76□□□□□ -0.53
SBDS-205ENST00000617799 LELP1Q5T871 98 aa11.76□□□□□ -0.53
SBDS-205ENST00000617799 MRPL18Q9H0U6 180 aaKnown RBP11.76□□□□□ -0.53
SBDS-205ENST00000617799 TRBV27A0A0K0K1C4 114 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 SDHAF1A6NFY7 115 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 I3L3M4 83 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 K7EP13 123 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 TNFRSF6BO95407 300 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 COTL1Q14019 142 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 NRACQ8N912 160 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
SBDS-205ENST00000617799 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
SBDS-205ENST00000617799 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
SBDS-205ENST00000617799 K7EMI3 77 aa11.74□□□□□ -0.53
SBDS-205ENST00000617799 Q6ZR54 194 aa11.74□□□□□ -0.53
SBDS-205ENST00000617799 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
SBDS-205ENST00000617799 TMEM70Q9BUB7 260 aa11.74□□□□□ -0.53
SBDS-205ENST00000617799 MAP1LC3AQ9H492 121 aa11.74□□□□□ -0.53
SBDS-205ENST00000617799 PMCHP20382 165 aa11.73□□□□□ -0.53
SBDS-205ENST00000617799 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms