RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PSMB3P49720 205 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 TMEM258P61165 79 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 CD164Q04900 197 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 RRN3P1Q2M238 152 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 TMEM136Q6ZRR5 245 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 LINC00479Q96M42 142 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 METTL26Q96S19 204 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 C11orf1Q9H5F2 150 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 JPT2Q9H910 190 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 FAT2Q9NYQ8 4349 aa6.23□□□□□ -1.41
GPC6-202ENST00000617456 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 IGHV3OR16-8A0A075B7F1 116 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 A0A087X0K7 114 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 GRIFINA4D1Z8 144 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 APCSP02743 223 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 FGF6P10767 208 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 SP6Q3SY56 376 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 EBLN2Q6P2I7 272 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 Q6ZRM9 215 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 SH2D6Q7Z4S9 175 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 LRTM2Q8N967 370 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 TMEM230Q96A57 120 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 C11orf68Q9H3H3 251 aaKnown RBP6.22□□□□□ -1.41
GPC6-202ENST00000617456 HEYLQ9NQ87 328 aaPredicted RBP6.22□□□□□ -1.41
GPC6-202ENST00000617456 APLNQ9ULZ1 77 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 U3KQE9 123 aa6.22□□□□□ -1.41
GPC6-202ENST00000617456 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
GPC6-202ENST00000617456 A0A1B0GVY2 172 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 EPM2AB3EWF7 344 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 IGKV1-17P01599 117 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 SUPT4H1P63272 117 aaKnown RBP6.21□□□□□ -1.42
GPC6-202ENST00000617456 SLC38A11Q08AI6 406 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 TMEM187Q14656 261 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 IZUMO4Q1ZYL8 232 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 TEN1Q86WV5 123 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 RAB37Q96AX2 223 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 DPH3Q96FX2 82 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 PRR13Q9NZ81 148 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 LY96Q9Y6Y9 160 aa6.21□□□□□ -1.42
GPC6-202ENST00000617456 DNAH11Q96DT5 4516 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 IGKV3-7A0A075B6H7 116 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 A0A0G2JRQ6 117 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 TRBV7-7A0A0K0K1E9 115 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 CEBPZOSA8MTT3 80 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 K7EQG2 157 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 ZNF90Q03938 601 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 CFAP126Q5VTH2 177 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 TMEM14EPQ6UXP3 125 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 DCANP1Q8TF63 244 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 TXNDC17Q9BRA2 123 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 KRTAP4-5Q9BYR2 181 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 RNASE7Q9H1E1 156 aaKnown RBP6.2□□□□□ -1.42
GPC6-202ENST00000617456 SLC39A9Q9NUM3 307 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 IL36BQ9NZH7 164 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 CACNG5Q9UF02 275 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 KLF12Q9Y4X4 402 aa6.2□□□□□ -1.42
GPC6-202ENST00000617456 TRBV20-1A0A075B6N2 111 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 A0A1B0GV50 99 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 A0A1B0GWB2 263 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 M0R2N4 97 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 DPM2O94777 84 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 IGHV3-48P01763 117 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 HLA-DQA1P01909 254 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 APOHP02749 345 aaPredicted RBP6.19□□□□□ -1.42
GPC6-202ENST00000617456 P0DMU3 169 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 FAM231AP0DMU4 169 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 FAM231CP0DMU5 169 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 RPL11P62913 178 aaKnown RBP6.19□□□□□ -1.42
GPC6-202ENST00000617456 SERF2P84101 59 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 SPINK9Q5DT21 86 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 HRCT1Q6UXD1 115 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 GNG13Q9P2W3 67 aa6.19□□□□□ -1.42
GPC6-202ENST00000617456 IGHV3-49A0A0A0MS15 119 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 C11orf94C9JXX5 98 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 BUB3O43684 328 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 MIFP14174 115 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 LEPP41159 167 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 DEFB131AP59861 70 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 SNRPD3P62318 126 aaKnown RBP6.18□□□□□ -1.42
GPC6-202ENST00000617456 C9orf153Q5TBE3 101 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 LINC01545Q5VT33 79 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 CD164L2Q6UWJ8 174 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 FAM231DQ6ZW35 169 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 ZC2HC1AQ96GY0 325 aa6.18□□□□□ -1.42
GPC6-202ENST00000617456 MRPL36Q9P0J6 103 aaKnown RBP6.18□□□□□ -1.42
GPC6-202ENST00000617456 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 IGHV3OR16-13A0A075B7E8 117 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 IGHV3-74A0A0B4J1X5 117 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 F2Z2F3 143 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 RTL8CO15255 209 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 MLANAQ16655 118 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 ANXA2RQ3ZCQ2 193 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 LYZL2Q7Z4W2 148 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 NPIPB3Q92617 1050 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 CHCHD1Q96BP2 118 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms