RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 TMEM97Q5BJF2 176 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 STHQ8IWL8 128 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 C11orf72Q8NBR9 251 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 ORAOV1Q8WV07 137 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 LINC01587Q99440 93 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 UNC79Q9P2D8 2635 aa11.48□□□□□ -0.57
NR1H3-235ENST00000616973 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 IGIPA6NJ69 53 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 ADARB2-AS1A8MUL3 147 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 TCTAP57738 103 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 UFSP1Q6NVU6 142 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 GTSCR1Q86UQ5 136 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 TMEM141Q96I45 108 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 TIMM17AQ99595 171 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 COX11Q9Y6N1 276 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 ANK3Q12955 4377 aaKnown RBP11.47□□□□□ -0.57
NR1H3-235ENST00000616973 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 HIGD1BQ9P298 99 aa11.47□□□□□ -0.57
NR1H3-235ENST00000616973 SEC11AP67812 179 aa11.46□□□□□ -0.58
NR1H3-235ENST00000616973 HSD52Q0P140 79 aa11.46□□□□□ -0.58
NR1H3-235ENST00000616973 FAM110AQ9BQ89 295 aa11.46□□□□□ -0.58
NR1H3-235ENST00000616973 PRSS29PA6NIE9 313 aa11.45□□□□□ -0.58
NR1H3-235ENST00000616973 PCP4P48539 62 aa11.45□□□□□ -0.58
NR1H3-235ENST00000616973 BEAN1Q3B7T3 259 aa11.45□□□□□ -0.58
NR1H3-235ENST00000616973 SMR3AQ99954 134 aa11.45□□□□□ -0.58
NR1H3-235ENST00000616973 I3L3M4 83 aa11.45□□□□□ -0.58
NR1H3-235ENST00000616973 LY6G6DO95868 133 aa11.45□□□□□ -0.58
NR1H3-235ENST00000616973 TSHBP01222 138 aa11.45□□□□□ -0.58
NR1H3-235ENST00000616973 IGLV1-51P01701 117 aa11.44□□□□□ -0.58
NR1H3-235ENST00000616973 RHODO00212 210 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 TAX1BP3O14907 124 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 SAP30O75446 220 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 PRM2P04554 102 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
NR1H3-235ENST00000616973 PMVKQ15126 192 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 XCL2Q9UBD3 114 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 NPSP0C0P6 89 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 CFAP126Q5VTH2 177 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 C1orf158Q8N1D5 194 aa11.43□□□□□ -0.58
NR1H3-235ENST00000616973 ACANP16112 2415 aa11.42□□□□□ -0.58
NR1H3-235ENST00000616973 WNK1Q9H4A3 2382 aa11.42□□□□□ -0.58
NR1H3-235ENST00000616973 RS1O15537 224 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 P0DMU3 169 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 FAM231AP0DMU4 169 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 FAM231CP0DMU5 169 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 C20orf203Q8NBC4 194 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 IL17DQ8TAD2 202 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 CST9LQ9H4G1 147 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 TRBV25-1A0A075B6N4 114 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 Q6ZVH6 145 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 TTTY13Q9BZ97 58 aa11.41□□□□□ -0.58
NR1H3-235ENST00000616973 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 A6NDN8 102 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 E9PLD3 99 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 DEFB104AQ8WTQ1 72 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 C19orf73Q9NVV2 129 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 IGHV3-73A0A0B4J1V6 119 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 IGHV3-53P01767 116 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 AZU1P20160 251 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 MAPKAPK5-AS1Q8N8E1 139 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 DNAJC30Q96LL9 226 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 MRPL16Q9NX20 251 aaKnown RBP11.39□□□□□ -0.59
NR1H3-235ENST00000616973 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
NR1H3-235ENST00000616973 TRAV8-6A0A0B4J262 113 aa11.38□□□□□ -0.59
NR1H3-235ENST00000616973 OR11H2Q8NH07 326 aa11.38□□□□□ -0.59
NR1H3-235ENST00000616973 NOTCH2Q04721 2471 aa11.38□□□□□ -0.59
NR1H3-235ENST00000616973 KRTAP10-3P60369 221 aa11.37□□□□□ -0.59
NR1H3-235ENST00000616973 RNASE8Q8TDE3 154 aaKnown RBP11.37□□□□□ -0.59
NR1H3-235ENST00000616973 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
NR1H3-235ENST00000616973 TAL2Q16559 108 aa11.37□□□□□ -0.59
NR1H3-235ENST00000616973 Q6ZSN1 163 aa11.37□□□□□ -0.59
NR1H3-235ENST00000616973 TMEM263Q8WUH6 116 aaKnown RBP11.37□□□□□ -0.59
NR1H3-235ENST00000616973 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
NR1H3-235ENST00000616973 H3BRM9 83 aa11.36□□□□□ -0.59
NR1H3-235ENST00000616973 GIG44P09565 113 aaPredicted RBP11.35□□□□□ -0.59
NR1H3-235ENST00000616973 UBE2V1Q13404 147 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 C21orf62-AS1Q17RA5 79 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 MYMXA0A1B0GTQ4 84 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 HERVK_113P61574 105 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 COTL1Q14019 142 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 NFE4Q86UQ8 179 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 PRADC1Q9BSG0 188 aa11.35□□□□□ -0.59
NR1H3-235ENST00000616973 HIVEP2P31629 2446 aa11.34□□□□□ -0.59
NR1H3-235ENST00000616973 CRYBA4P53673 196 aa11.34□□□□□ -0.59
NR1H3-235ENST00000616973 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
NR1H3-235ENST00000616973 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
NR1H3-235ENST00000616973 IGLV4-3A0A075B6K6 122 aa11.33□□□□□ -0.6
NR1H3-235ENST00000616973 LINC00482Q8N8I6 264 aa11.33□□□□□ -0.6
NR1H3-235ENST00000616973 NF1P21359 2839 aa11.33□□□□□ -0.6
NR1H3-235ENST00000616973 CEND1Q8N111 149 aa11.33□□□□□ -0.6
NR1H3-235ENST00000616973 PF4P02776 101 aa11.32□□□□□ -0.6
NR1H3-235ENST00000616973 PTTG1IPP53801 180 aa11.32□□□□□ -0.6
NR1H3-235ENST00000616973 DAZ2Q13117 558 aaKnown RBP11.32□□□□□ -0.6
NR1H3-235ENST00000616973 VAMP3Q15836 100 aa11.32□□□□□ -0.6
NR1H3-235ENST00000616973 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms