RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 ANK3Q12955 4377 aaKnown RBP11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 U3KQK5 164 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 TRAV12-2A0A075B6T6 113 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 GAGE2BQ13066 116 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 GAGE2EQ4V326 116 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 Q8N2B8 174 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 KLHL30-AS1Q8NEE0 82 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 SMR3AQ99954 134 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 GAGE2DQ9UEU5 116 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 LENEPQ9Y5L5 61 aa11.64□□□□□ -0.55
SEMA3B-212ENST00000616701 FAM19A4Q96LR4 140 aa11.63□□□□□ -0.55
SEMA3B-212ENST00000616701 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
SEMA3B-212ENST00000616701 RNF152Q8N8N0 203 aa11.62□□□□□ -0.55
SEMA3B-212ENST00000616701 LINC00694P0DN24 101 aa11.62□□□□□ -0.55
SEMA3B-212ENST00000616701 ZNF747Q9BV97 191 aa11.62□□□□□ -0.55
SEMA3B-212ENST00000616701 K7EQG2 157 aa11.61□□□□□ -0.55
SEMA3B-212ENST00000616701 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
SEMA3B-212ENST00000616701 IGLL5B9A064 214 aa11.61□□□□□ -0.55
SEMA3B-212ENST00000616701 LINC01619G3V211 115 aa11.61□□□□□ -0.55
SEMA3B-212ENST00000616701 LGALS9O00182 355 aa11.61□□□□□ -0.55
SEMA3B-212ENST00000616701 A0A096LNJ9 63 aa11.6□□□□□ -0.55
SEMA3B-212ENST00000616701 ASIPP42127 132 aa11.6□□□□□ -0.55
SEMA3B-212ENST00000616701 DLX4Q92988 240 aaPredicted RBP11.6□□□□□ -0.55
SEMA3B-212ENST00000616701 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
SEMA3B-212ENST00000616701 IFITM1P13164 125 aa11.6□□□□□ -0.55
SEMA3B-212ENST00000616701 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
SEMA3B-212ENST00000616701 PHLDA3Q9Y5J5 127 aa11.6□□□□□ -0.55
SEMA3B-212ENST00000616701 FCER1GP30273 86 aa11.59□□□□□ -0.55
SEMA3B-212ENST00000616701 MAP1LC3AQ9H492 121 aa11.59□□□□□ -0.55
SEMA3B-212ENST00000616701 PRO0461Q9UI25 63 aa11.59□□□□□ -0.55
SEMA3B-212ENST00000616701 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
SEMA3B-212ENST00000616701 A0A0J9YX75 114 aa11.58□□□□□ -0.55
SEMA3B-212ENST00000616701 KNCNA6PVL3 124 aa11.58□□□□□ -0.55
SEMA3B-212ENST00000616701 C14orf178Q8N769 122 aaPredicted RBP11.58□□□□□ -0.55
SEMA3B-212ENST00000616701 OR9G4Q8NGQ1 327 aa11.58□□□□□ -0.55
SEMA3B-212ENST00000616701 E9PLD3 99 aa11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 MUC4Q99102 2169 aa11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 KLLNB2CW77 178 aa11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 CD28P10747 220 aa11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 C4orf3Q8WVX3 66 aa11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 FOXC2Q99958 501 aa11.58□□□□□ -0.56
SEMA3B-212ENST00000616701 RHODO00212 210 aa11.57□□□□□ -0.56
SEMA3B-212ENST00000616701 TMEM86BQ8N661 226 aa11.57□□□□□ -0.56
SEMA3B-212ENST00000616701 CRLF1O75462 422 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 SNCGO76070 127 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 MGPP08493 103 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 CD7P09564 240 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 DEFB131AP59861 70 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 FAM19A5Q7Z5A7 132 aaPredicted RBP11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 APRG1Q8IVJ8 170 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 TMEM61Q8N0U2 210 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 CACNG7P62955 275 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 JPT2Q9H910 190 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 HIVEP2P31629 2446 aa11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 NIPBLQ6KC79 2804 aaeCLIP11.56□□□□□ -0.56
SEMA3B-212ENST00000616701 F5H768 121 aa11.55□□□□□ -0.56
SEMA3B-212ENST00000616701 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
SEMA3B-212ENST00000616701 HTN1P15515 57 aa11.55□□□□□ -0.56
SEMA3B-212ENST00000616701 SMCPP49901 116 aaPredicted RBP11.55□□□□□ -0.56
SEMA3B-212ENST00000616701 DYNLRB2Q8TF09 96 aa11.55□□□□□ -0.56
SEMA3B-212ENST00000616701 DEFB104AQ8WTQ1 72 aa11.55□□□□□ -0.56
SEMA3B-212ENST00000616701 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
SEMA3B-212ENST00000616701 EDA2RQ9HAV5 297 aa11.54□□□□□ -0.56
SEMA3B-212ENST00000616701 IGHV4-4A0A075B6R2 117 aa11.54□□□□□ -0.56
SEMA3B-212ENST00000616701 LEPP41159 167 aa11.54□□□□□ -0.56
SEMA3B-212ENST00000616701 NRACQ8N912 160 aa11.54□□□□□ -0.56
SEMA3B-212ENST00000616701 HBDP02042 147 aa11.53□□□□□ -0.56
SEMA3B-212ENST00000616701 RPL39LQ96EH5 51 aaKnown RBP11.53□□□□□ -0.56
SEMA3B-212ENST00000616701 MDFICQ9P1T7 246 aa11.53□□□□□ -0.56
SEMA3B-212ENST00000616701 PRM2P04554 102 aa11.53□□□□□ -0.56
SEMA3B-212ENST00000616701 CHAC1Q9BUX1 264 aa11.53□□□□□ -0.56
SEMA3B-212ENST00000616701 PEMTQ9UBM1 199 aa11.53□□□□□ -0.56
SEMA3B-212ENST00000616701 PSMB2P49721 201 aa11.52□□□□□ -0.57
SEMA3B-212ENST00000616701 A0A087WWL8 130 aa11.52□□□□□ -0.57
SEMA3B-212ENST00000616701 EMP1P54849 157 aa11.52□□□□□ -0.57
SEMA3B-212ENST00000616701 LINC01006Q8NI28 216 aa11.52□□□□□ -0.57
SEMA3B-212ENST00000616701 LOC107984156A0A0G2JMH3 177 aa11.51□□□□□ -0.57
SEMA3B-212ENST00000616701 WIPF1O43516 503 aa11.51□□□□□ -0.57
SEMA3B-212ENST00000616701 LGALS9BQ3B8N2 356 aa11.51□□□□□ -0.57
SEMA3B-212ENST00000616701 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
SEMA3B-212ENST00000616701 ARL17AQ8IVW1 177 aa11.51□□□□□ -0.57
SEMA3B-212ENST00000616701 Q8N1Y9 231 aa11.51□□□□□ -0.57
SEMA3B-212ENST00000616701 SETXQ7Z333 2677 aaKnown RBP11.51□□□□□ -0.57
SEMA3B-212ENST00000616701 TMEM158Q8WZ71 300 aa11.5□□□□□ -0.57
SEMA3B-212ENST00000616701 CHCHD5Q9BSY4 110 aa11.5□□□□□ -0.57
SEMA3B-212ENST00000616701 DPH3P1Q9H4G8 78 aa11.5□□□□□ -0.57
SEMA3B-212ENST00000616701 DNAJC30Q96LL9 226 aa11.5□□□□□ -0.57
SEMA3B-212ENST00000616701 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
SEMA3B-212ENST00000616701 RBMY1A1P0DJD3 496 aaKnown RBP11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 RBMY1CP0DJD4 496 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 RBMY1FQ15415 496 aaKnown RBP11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 C12orf74Q32Q52 190 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 PPDPFLQ8WWR9 84 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 RASL10AQ92737 203 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 NXT2Q9NPJ8 142 aaKnown RBP11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 KLK5Q9Y337 293 aaPredicted RBP11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 IGLV2-18A0A075B6J9 118 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 RBMY1BA6NDE4 496 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms