RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 DKK2Q9UBU2 259 aa12.33□□□□□ -0.44
TRAPPC3-209ENST00000616395 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
TRAPPC3-209ENST00000616395 MUC21A0A0G2JKD1 596 aa12.32□□□□□ -0.44
TRAPPC3-209ENST00000616395 MUC21A0A140T8X8 626 aa12.32□□□□□ -0.44
TRAPPC3-209ENST00000616395 PPP1R17O96001 155 aa12.32□□□□□ -0.44
TRAPPC3-209ENST00000616395 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
TRAPPC3-209ENST00000616395 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
TRAPPC3-209ENST00000616395 SPXQ9BT56 116 aa12.32□□□□□ -0.44
TRAPPC3-209ENST00000616395 ZNF705AQ6ZN79 300 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC3-209ENST00000616395 MRAP2Q96G30 205 aa12.31□□□□□ -0.44
TRAPPC3-209ENST00000616395 PRELID3AQ96N28 172 aa12.31□□□□□ -0.44
TRAPPC3-209ENST00000616395 SAMD10Q9BYL1 202 aa12.31□□□□□ -0.44
TRAPPC3-209ENST00000616395 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC3-209ENST00000616395 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
TRAPPC3-209ENST00000616395 HTN1P15515 57 aa12.3□□□□□ -0.44
TRAPPC3-209ENST00000616395 AMN1Q8IY45 258 aa12.3□□□□□ -0.44
TRAPPC3-209ENST00000616395 HIST3H2BBQ8N257 126 aa12.3□□□□□ -0.44
TRAPPC3-209ENST00000616395 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
TRAPPC3-209ENST00000616395 HSBP1O75506 76 aa12.29□□□□□ -0.44
TRAPPC3-209ENST00000616395 NXPH4O95158 308 aa12.29□□□□□ -0.44
TRAPPC3-209ENST00000616395 PMCHP20382 165 aa12.29□□□□□ -0.44
TRAPPC3-209ENST00000616395 PIK3CD-AS1Q5SR53 167 aa12.29□□□□□ -0.44
TRAPPC3-209ENST00000616395 Q6ZQT7 251 aa12.29□□□□□ -0.44
TRAPPC3-209ENST00000616395 C18orf32Q8TCD1 76 aa12.29□□□□□ -0.44
TRAPPC3-209ENST00000616395 CHCHD1Q96BP2 118 aaKnown RBP12.29□□□□□ -0.44
TRAPPC3-209ENST00000616395 FAT1Q14517 4588 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 TEX48A0A1B0GUV7 120 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 RAB4AP20338 218 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 MRPL51Q4U2R6 128 aaKnown RBP12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 Q5VSD8 79 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 PTH2Q96A98 100 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 C18orf15Q96N68 181 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 TP53TG3Q9ULZ0 132 aa12.28□□□□□ -0.44
TRAPPC3-209ENST00000616395 SMIM9A6NGZ8 99 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 D6R8Y8 96 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 ESDP10768 282 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 EVI2AP22794 236 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 FA2HQ7L5A8 372 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 C15orf53Q8NAA6 179 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 PACRGQ96M98 296 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.45
TRAPPC3-209ENST00000616395 M0R2P5 195 aa12.26□□□□□ -0.45
TRAPPC3-209ENST00000616395 SERF1AO75920 110 aa12.26□□□□□ -0.45
TRAPPC3-209ENST00000616395 PRM2P04554 102 aa12.26□□□□□ -0.45
TRAPPC3-209ENST00000616395 FABP4P15090 132 aa12.26□□□□□ -0.45
TRAPPC3-209ENST00000616395 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
TRAPPC3-209ENST00000616395 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
TRAPPC3-209ENST00000616395 A8MWV9 139 aa12.25□□□□□ -0.45
TRAPPC3-209ENST00000616395 MGPP08493 103 aa12.25□□□□□ -0.45
TRAPPC3-209ENST00000616395 ZNF876PQ49A33 203 aa12.25□□□□□ -0.45
TRAPPC3-209ENST00000616395 SRRM2Q9UQ35 2752 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-209ENST00000616395 LINC00614P0C842 121 aa12.24□□□□□ -0.45
TRAPPC3-209ENST00000616395 NIT1Q86X76 327 aa12.24□□□□□ -0.45
TRAPPC3-209ENST00000616395 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC3-209ENST00000616395 NXT2Q9NPJ8 142 aaKnown RBP12.24□□□□□ -0.45
TRAPPC3-209ENST00000616395 GSN-AS1Q9NRJ2 163 aa12.24□□□□□ -0.45
TRAPPC3-209ENST00000616395 MDFICQ9P1T7 246 aa12.24□□□□□ -0.45
TRAPPC3-209ENST00000616395 H7C1H1 209 aa12.23□□□□□ -0.45
TRAPPC3-209ENST00000616395 XGP55808 180 aa12.23□□□□□ -0.45
TRAPPC3-209ENST00000616395 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
TRAPPC3-209ENST00000616395 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-209ENST00000616395 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
TRAPPC3-209ENST00000616395 F5H697 171 aa12.22□□□□□ -0.45
TRAPPC3-209ENST00000616395 RHODO00212 210 aa12.22□□□□□ -0.45
TRAPPC3-209ENST00000616395 AMTP48728 403 aa12.22□□□□□ -0.45
TRAPPC3-209ENST00000616395 DAD1P61803 113 aa12.22□□□□□ -0.45
TRAPPC3-209ENST00000616395 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
TRAPPC3-209ENST00000616395 RNF185Q96GF1 192 aa12.22□□□□□ -0.45
TRAPPC3-209ENST00000616395 HIST1H2BLQ99880 126 aa12.22□□□□□ -0.45
TRAPPC3-209ENST00000616395 TNFRSF6BO95407 300 aa12.21□□□□□ -0.45
TRAPPC3-209ENST00000616395 OR10D4PQ8NGN7 298 aa12.21□□□□□ -0.45
TRAPPC3-209ENST00000616395 AP5S1Q9NUS5 200 aa12.21□□□□□ -0.45
TRAPPC3-209ENST00000616395 LINC00588Q9Y4M8 146 aa12.21□□□□□ -0.45
TRAPPC3-209ENST00000616395 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC3-209ENST00000616395 NUDT3O95989 172 aa12.2□□□□□ -0.46
TRAPPC3-209ENST00000616395 SMIM6P0DI80 62 aa12.2□□□□□ -0.46
TRAPPC3-209ENST00000616395 BTF3P20290 206 aaKnown RBP12.2□□□□□ -0.46
TRAPPC3-209ENST00000616395 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
TRAPPC3-209ENST00000616395 KRTAP1-5Q9BYS1 174 aa12.2□□□□□ -0.46
TRAPPC3-209ENST00000616395 CIDEAO60543 219 aa12.19□□□□□ -0.46
TRAPPC3-209ENST00000616395 G0S2P27469 103 aa12.19□□□□□ -0.46
TRAPPC3-209ENST00000616395 CCL18P55774 89 aa12.19□□□□□ -0.46
TRAPPC3-209ENST00000616395 ZNF56Q15929 161 aa12.19□□□□□ -0.46
TRAPPC3-209ENST00000616395 VPS13BQ7Z7G8 4022 aa12.19□□□□□ -0.46
TRAPPC3-209ENST00000616395 LOC389332A0A1B0GUA5 103 aa12.18□□□□□ -0.46
TRAPPC3-209ENST00000616395 J3QL48 77 aa12.18□□□□□ -0.46
TRAPPC3-209ENST00000616395 K7EMI3 77 aa12.18□□□□□ -0.46
TRAPPC3-209ENST00000616395 NCR2O95944 276 aa12.18□□□□□ -0.46
TRAPPC3-209ENST00000616395 FAM74A4Q5TZK3 123 aa12.18□□□□□ -0.46
TRAPPC3-209ENST00000616395 NPYP01303 97 aa12.17□□□□□ -0.46
TRAPPC3-209ENST00000616395 AZU1P20160 251 aa12.17□□□□□ -0.46
TRAPPC3-209ENST00000616395 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.463e-8■□□□□ 8.2
TRAPPC3-209ENST00000616395 PRSS47A8MTI9 375 aa12.16□□□□□ -0.46
TRAPPC3-209ENST00000616395 SMKR1H3BMG3 65 aa12.16□□□□□ -0.46
TRAPPC3-209ENST00000616395 TCAPO15273 167 aa12.16□□□□□ -0.46
TRAPPC3-209ENST00000616395 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-209ENST00000616395 Q8N8P6 123 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms