RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 ODF3Q96PU9 254 aa10.11□□□□□ -0.79
PCDHA11-202ENST00000616325 CCDC168Q8NDH2 2452 aa10.11□□□□□ -0.79
PCDHA11-202ENST00000616325 IGLV4-69A0A075B6H9 119 aa10.1□□□□□ -0.79
PCDHA11-202ENST00000616325 TSHBP01222 138 aa10.1□□□□□ -0.79
PCDHA11-202ENST00000616325 RNASE13Q5GAN3 156 aaKnown RBP10.1□□□□□ -0.79
PCDHA11-202ENST00000616325 PRRC2AP48634 2157 aaKnown RBP10.1□□□□□ -0.79
PCDHA11-202ENST00000616325 EDN2P20800 178 aa10.1□□□□□ -0.79
PCDHA11-202ENST00000616325 FLNCQ14315 2725 aa10.09□□□□□ -0.79
PCDHA11-202ENST00000616325 SRSF2Q01130 221 aaKnown RBP10.09□□□□□ -0.79
PCDHA11-202ENST00000616325 LY6DQ14210 128 aa10.09□□□□□ -0.79
PCDHA11-202ENST00000616325 FAM110DQ8TAY7 271 aaPredicted RBP10.09□□□□□ -0.79
PCDHA11-202ENST00000616325 ABCA12Q86UK0 2595 aa10.09□□□□□ -0.79
PCDHA11-202ENST00000616325 SDHAF1A6NFY7 115 aa10.09□□□□□ -0.79
PCDHA11-202ENST00000616325 TRIAP1O43715 76 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 ADORA2A-AS1P86434 159 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 PAPPA-AS1Q5QFB9 102 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 TRAV21A0A0B4J279 112 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 BRI3O95415 125 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 TRAV12-2A0A075B6T6 113 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 SBSPONQ8IVN8 264 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 TMEM190Q8WZ59 177 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 ITPR1Q14643 2758 aa10.08□□□□□ -0.8
PCDHA11-202ENST00000616325 TRAV41A0A0B4J266 112 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 FAM236AA0A1B0GUQ0 79 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 FAM236BA0A1B0GV22 79 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 IGF2-ASQ6U949 168 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 DAND5Q8N907 189 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 TRGV11A0A075B6L2 103 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 RS1O15537 224 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 EIF4EBP3O60516 100 aaPredicted RBP10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 COX6CP09669 75 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 UBE2E1P51965 193 aa10.07□□□□□ -0.8
PCDHA11-202ENST00000616325 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
PCDHA11-202ENST00000616325 TMEM263Q8WUH6 116 aaKnown RBP10.06□□□□□ -0.8
PCDHA11-202ENST00000616325 DUX5Q96PT3 197 aa10.06□□□□□ -0.8
PCDHA11-202ENST00000616325 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
PCDHA11-202ENST00000616325 LRRK2Q5S007 2527 aa10.06□□□□□ -0.8
PCDHA11-202ENST00000616325 K7ENP7 123 aa10.06□□□□□ -0.8
PCDHA11-202ENST00000616325 IGHV3-73A0A0B4J1V6 119 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 TRBV10-2A0A0K0K1G8 114 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 A8MZ25 164 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 M0QXV9 152 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 MUC4Q99102 2169 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 VCYO14598 125 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 NPFFO15130 113 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 Q8N6K4 173 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 LGALS9O00182 355 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 BLCAPP62952 87 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 C9orf153Q5TBE3 101 aa10.05□□□□□ -0.8
PCDHA11-202ENST00000616325 CENPVL3A0A0U1RRI6 287 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 MINOS1Q5TGZ0 78 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 GPHB5Q86YW7 130 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 MINOS1-NBL1R4GNA1 71 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 IGIPA6NJ69 53 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 OOSP1A8MZH6 123 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 C9orf47Q6ZRZ4 202 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 SIRPDQ9H106 197 aa10.04□□□□□ -0.8
PCDHA11-202ENST00000616325 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 M0R2P5 195 aa10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 H3BUX3 64 aa10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 H7C423 109 aa10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 LINC00694P0DN24 101 aa10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 CEMP1Q6PRD7 247 aaPredicted RBP10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 RHPN1-AS1Q9BWJ2 59 aa10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 KLK9Q9UKQ9 250 aa10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 VPREB3Q9UKI3 123 aa10.03□□□□□ -0.8
PCDHA11-202ENST00000616325 NAV2Q8IVL1 2488 aa10.02□□□□□ -0.81
PCDHA11-202ENST00000616325 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
PCDHA11-202ENST00000616325 IGHV4-4A0A075B6R2 117 aa10.02□□□□□ -0.81
PCDHA11-202ENST00000616325 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
PCDHA11-202ENST00000616325 RNF223E7ERA6 249 aa10.02□□□□□ -0.81
PCDHA11-202ENST00000616325 ICOSQ9Y6W8 199 aa10.02□□□□□ -0.81
PCDHA11-202ENST00000616325 PPP1R17O96001 155 aa10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 ABCA2Q9BZC7 2435 aa10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 C5orf56Q8N8D9 126 aa10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 EPG5Q9HCE0 2579 aa10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 ATP5J2P56134 94 aa10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 C9orf139Q6ZV77 190 aa10.01□□□□□ -0.81
PCDHA11-202ENST00000616325 A0A0J9YXY3 114 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 HIST2H2BDQ6DRA6 164 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 TMEM141Q96I45 108 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 PKD1L2Q7Z442 2459 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 TMEM101Q96IK0 257 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 LEPROTO15243 131 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 PRM2P04554 102 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 EDA2RQ9HAV5 297 aa10□□□□□ -0.81
PCDHA11-202ENST00000616325 C11orf71Q6IPW1 123 aa9.99□□□□□ -0.81
PCDHA11-202ENST00000616325 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms