RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 CACNA1CQ13936 2221 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 INTS1Q8N201 2190 aaKnown RBP0.76□□□□□ -2.29
TARDBP-214ENST00000613177 TANC2Q9HCD6 1990 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 UQCRHLA0A096LP55 91 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 IGHV1-58A0A0C4DH39 117 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 A0A1B0GV72 72 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 hDV103S1A0JD37 113 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 F8W1H4 67 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 LYNX1G3V0Z9 82 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 M0R129 80 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 HMGN4O00479 90 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 EDF1O60869 148 aaKnown RBP0.76□□□□□ -2.29
TARDBP-214ENST00000613177 CST7O76096 145 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 HMGN2P05204 90 aaKnown RBP0.76□□□□□ -2.29
TARDBP-214ENST00000613177 FABP2P12104 132 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 RPL35P42766 123 aaKnown RBP0.76□□□□□ -2.29
TARDBP-214ENST00000613177 DNAJB13P59910 316 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 TFF3Q07654 80 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 CCDC153Q494R4 210 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 ARPINQ7Z6K5 226 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 LRRC18Q8N456 261 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 MORN4Q8NDC4 146 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 C4orf3Q8WVX3 66 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 SDF2Q99470 211 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 EFCAB11Q9BUY7 163 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 DPY30Q9C005 99 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 FAM107BQ9H098 131 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 NIT2Q9NQR4 276 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 CCDC167Q9P0B6 97 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 ACACAQ13085 2346 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 POLEQ07864 2286 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 AHCTF1Q8WYP5 2266 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 DIDO1Q9BTC0 2240 aaKnown RBP0.76□□□□□ -2.29
TARDBP-214ENST00000613177 LAMA5O15230 3695 aa0.76□□□□□ -2.29
TARDBP-214ENST00000613177 CELSR2Q9HCU4 2923 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 NCOR2Q9Y618 2525 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 CNTRLQ7Z7A1 2325 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 PCNX1Q96RV3 2341 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 MED13LQ71F56 2210 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 ALPK2Q86TB3 2170 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 A0A087WSZ3 146 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 TRAV5A0A0B4J249 113 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 TRAV17A0A0B4J275 112 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 A0A0G2JND7 137 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 CPSF4LA6NMK7 179 aaKnown RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 DEFB108AA8MXU0 73 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 H3BSH0 61 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 FXYD1O00168 92 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 KPNA4O00629 521 aaPredicted RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 TFF1P04155 84 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 S100A11P31949 105 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 S100A3P33764 101 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 RPS27P42677 84 aaKnown RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 POLR2JP52435 117 aaKnown RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 FXYD6P3P58550 94 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 GNGT1P63211 74 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 EMX2Q04743 252 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 PHF5AQ7RTV0 110 aaKnown RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 OR5AS1Q8N127 324 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 C10orf82Q8WW14 230 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 CCDC115Q96NT0 180 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 HEATR1Q9H583 2144 aaKnown RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 NAT8BQ9UHF3 227 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 NUBP2Q9Y5Y2 271 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 PDZD2O15018 2839 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 UTP20O75691 2785 aaKnown RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 ITPR1Q14643 2758 aa0.75□□□□□ -2.29
TARDBP-214ENST00000613177 HRNRQ86YZ3 2850 aaPredicted RBP0.75□□□□□ -2.29
TARDBP-214ENST00000613177 ARFGEF3Q5TH69 2177 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 TENM4Q6N022 2769 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 PIEZO1Q92508 2521 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 IGF2RP11717 2491 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 HIVEP3Q5T1R4 2406 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 DSPPQ9NZW4 1301 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 TRAV27A0A087WT01 109 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 A0A096LPI6 279 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 A0A1B0GWA3 101 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 ATP6V1G2-DDX39BF2Z307 99 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 H0YJX3 145 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 CDC42EP2O14613 210 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 IFNA21P01568 189 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 GYPBP06028 91 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 COX4I1P13073 169 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 COX6B1P14854 86 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 RPL7P18124 248 aaKnown RBP0.74□□□□□ -2.29
TARDBP-214ENST00000613177 B2MP61769 119 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 PRB3Q04118 309 aaPredicted RBP0.74□□□□□ -2.29
TARDBP-214ENST00000613177 LINC00322Q6ZN03 302 aaPredicted RBP0.74□□□□□ -2.29
TARDBP-214ENST00000613177 TEN1Q86WV5 123 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 TEX29Q8N6K0 151 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 FAM216BQ8N7L0 139 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 LINC00526Q96FQ7 95 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 PPP3R2Q96LZ3 170 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 CGREF1Q99674 301 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 TTTY10Q9BZA0 68 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 RERGLQ9H628 205 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 TPT1P8Q9HAU6 139 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 SAR1AQ9NR31 198 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 ATPIF1Q9UII2 106 aa0.74□□□□□ -2.29
TARDBP-214ENST00000613177 TRAPPC2LQ9UL33 140 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms