RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 SLC25A20O43772 301 aa11.21□□□□□ -0.62
PCDHGB1-202ENST00000611598 IGHV4-39P01824 125 aa11.21□□□□□ -0.62
PCDHGB1-202ENST00000611598 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.62
PCDHGB1-202ENST00000611598 MUSTN1Q8IVN3 82 aa11.21□□□□□ -0.62
PCDHGB1-202ENST00000611598 Q8N1Y9 231 aa11.21□□□□□ -0.62
PCDHGB1-202ENST00000611598 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
PCDHGB1-202ENST00000611598 LEPROTO15243 131 aa11.2□□□□□ -0.62
PCDHGB1-202ENST00000611598 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
PCDHGB1-202ENST00000611598 SORL1Q92673 2214 aa11.2□□□□□ -0.62
PCDHGB1-202ENST00000611598 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
PCDHGB1-202ENST00000611598 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
PCDHGB1-202ENST00000611598 H3BUA1 57 aa11.19□□□□□ -0.62
PCDHGB1-202ENST00000611598 IGHV4-61A0A0C4DH41 118 aa11.19□□□□□ -0.62
PCDHGB1-202ENST00000611598 RHODO00212 210 aa11.19□□□□□ -0.62
PCDHGB1-202ENST00000611598 ID1P41134 155 aa11.19□□□□□ -0.62
PCDHGB1-202ENST00000611598 SVIPQ8NHG7 77 aa11.19□□□□□ -0.62
PCDHGB1-202ENST00000611598 A6NDX4 124 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 BRI3O95415 125 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 IGLV1-40P01703 118 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 RNF183Q96D59 192 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 ERG28Q9UKR5 140 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 CELSR2Q9HCU4 2923 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 IGLV4-3A0A075B6K6 122 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 RHOHQ15669 191 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 SPINK13Q1W4C9 94 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 C20orf203Q8NBC4 194 aa11.18□□□□□ -0.62
PCDHGB1-202ENST00000611598 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.17□□□□□ -0.62
PCDHGB1-202ENST00000611598 GATA3P23771 443 aa11.17□□□□□ -0.62
PCDHGB1-202ENST00000611598 VCX2Q9H322 139 aa11.17□□□□□ -0.62
PCDHGB1-202ENST00000611598 A0A0B4J2C4 111 aa11.16□□□□□ -0.62
PCDHGB1-202ENST00000611598 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
PCDHGB1-202ENST00000611598 Q1RN00 199 aa11.16□□□□□ -0.62
PCDHGB1-202ENST00000611598 BEX4Q9NWD9 120 aaPredicted RBP11.16□□□□□ -0.62
PCDHGB1-202ENST00000611598 A0A0J9YX75 114 aa11.15□□□□□ -0.62
PCDHGB1-202ENST00000611598 A0A0J9YXY3 114 aa11.15□□□□□ -0.62
PCDHGB1-202ENST00000611598 SPXQ9BT56 116 aa11.15□□□□□ -0.62
PCDHGB1-202ENST00000611598 M0R2P5 195 aa11.15□□□□□ -0.63
PCDHGB1-202ENST00000611598 CEMP1Q6PRD7 247 aaPredicted RBP11.15□□□□□ -0.63
PCDHGB1-202ENST00000611598 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.63
PCDHGB1-202ENST00000611598 IGHV1OR15-1A0A075B7D0 117 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 I3L3M4 83 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 K7EMT4 169 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 CFHR3Q02985 330 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 DOPEY2Q9Y3R5 2298 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 IGHV3-73A0A0B4J1V6 119 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 FAM104AQ969W3 186 aa11.14□□□□□ -0.63
PCDHGB1-202ENST00000611598 SPG11Q96JI7 2443 aa11.13□□□□□ -0.63
PCDHGB1-202ENST00000611598 CSPG4Q6UVK1 2322 aa11.13□□□□□ -0.63
PCDHGB1-202ENST00000611598 PROK1P58294 105 aa11.13□□□□□ -0.63
PCDHGB1-202ENST00000611598 LITAFQ99732 161 aa11.13□□□□□ -0.63
PCDHGB1-202ENST00000611598 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
PCDHGB1-202ENST00000611598 TRIAP1O43715 76 aa11.12□□□□□ -0.63
PCDHGB1-202ENST00000611598 LINC01620Q4KN68 170 aa11.12□□□□□ -0.63
PCDHGB1-202ENST00000611598 CITED1Q99966 193 aa11.12□□□□□ -0.63
PCDHGB1-202ENST00000611598 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
PCDHGB1-202ENST00000611598 ANAPC13Q9BS18 74 aa11.12□□□□□ -0.63
PCDHGB1-202ENST00000611598 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 ACACBO00763 2458 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 CRLF1O75462 422 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 CD28P10747 220 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 Q6ZSV7 163 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 Q9UF83 564 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 PRRC2AP48634 2157 aaKnown RBP11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 A8MZ25 164 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 M0QXV9 152 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 PRSS2P07478 247 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 HTN1P15515 57 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 UCNP55089 124 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 SNRPD3P62318 126 aaKnown RBP11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 LY6DQ14210 128 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 TIMM21Q9BVV7 248 aa11.11□□□□□ -0.63
PCDHGB1-202ENST00000611598 K7EQG2 157 aa11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 PRM2P04554 102 aa11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 NPC2P61916 151 aa11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 TEX29Q8N6K0 151 aa11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 AVPP01185 164 aa11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
PCDHGB1-202ENST00000611598 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
PCDHGB1-202ENST00000611598 PSMB8P28062 276 aa11.09□□□□□ -0.63
PCDHGB1-202ENST00000611598 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
PCDHGB1-202ENST00000611598 CREBBPQ92793 2442 aa11.09□□□□□ -0.63
PCDHGB1-202ENST00000611598 ITPR1Q14643 2758 aa11.09□□□□□ -0.63
PCDHGB1-202ENST00000611598 CSMD2Q7Z408 3487 aa11.08□□□□□ -0.64
PCDHGB1-202ENST00000611598 IGHV4-30-2A0A087WSY4 118 aa11.08□□□□□ -0.64
PCDHGB1-202ENST00000611598 TRBV30A0A0K0K1B3 111 aa11.08□□□□□ -0.64
PCDHGB1-202ENST00000611598 NHLRC4P0CG21 123 aaPredicted RBP11.08□□□□□ -0.64
PCDHGB1-202ENST00000611598 SYNJ2BPP57105 145 aa11.08□□□□□ -0.64
PCDHGB1-202ENST00000611598 MRPS36P82909 103 aaKnown RBP11.08□□□□□ -0.64
PCDHGB1-202ENST00000611598 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms