RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 TMEM262E9PQX1 116 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 GNRH2O43555 120 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 IGHV4-59P01825 116 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 IGHG2P01859 326 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 TSPEAR-AS2P59090 65 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 APRG1Q8IVJ8 170 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 ANKRD29Q8N6D5 301 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 LINC00527Q9UJ94 153 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 CCDC168Q8NDH2 2452 aa14.27□□□□□ -0.12
SEMA3B-210ENST00000611067 SOCS3O14543 225 aa14.27□□□□□ -0.13
SEMA3B-210ENST00000611067 NXPH4O95158 308 aa14.27□□□□□ -0.13
SEMA3B-210ENST00000611067 POLR2KP53803 58 aaKnown RBP14.27□□□□□ -0.13
SEMA3B-210ENST00000611067 TIMM17AQ99595 171 aa14.27□□□□□ -0.13
SEMA3B-210ENST00000611067 KIF25-AS1Q9Y6Z4 181 aa14.27□□□□□ -0.13
SEMA3B-210ENST00000611067 SCGB1C2P0DMR2 95 aa14.26□□□□□ -0.13
SEMA3B-210ENST00000611067 LINC00315P59091 139 aa14.26□□□□□ -0.13
SEMA3B-210ENST00000611067 RNASE4P34096 147 aaKnown RBP14.26□□□□□ -0.13
SEMA3B-210ENST00000611067 BLCAPP62952 87 aa14.26□□□□□ -0.13
SEMA3B-210ENST00000611067 TMEM170BQ5T4T1 132 aa14.25□□□□□ -0.13
SEMA3B-210ENST00000611067 AMELXQ99217 191 aa14.25□□□□□ -0.13
SEMA3B-210ENST00000611067 GCN1Q92616 2671 aaKnown RBP14.25□□□□□ -0.13
SEMA3B-210ENST00000611067 M0QXV9 152 aa14.25□□□□□ -0.13
SEMA3B-210ENST00000611067 C19orf54Q5BKX5 351 aa14.25□□□□□ -0.13
SEMA3B-210ENST00000611067 ITPR3Q14573 2671 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 RPL39P62891 51 aaKnown RBP14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 ZNF876PQ49A33 203 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 ZNRF2Q8NHG8 242 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 RNF183Q96D59 192 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 KIR2DL4Q99706 377 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 TRBV7-9A0A0J9YWB2 115 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 FAM223BA6NKX1 122 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 VCYO14598 125 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 DEFB1P60022 68 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 FAM223AQ8IWN6 122 aa14.24□□□□□ -0.13
SEMA3B-210ENST00000611067 MUC4Q99102 2169 aa14.23□□□□□ -0.13
SEMA3B-210ENST00000611067 J3QQQ9 107 aa14.23□□□□□ -0.13
SEMA3B-210ENST00000611067 SLC25A20O43772 301 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 ARL3P36405 182 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 UNC79Q9P2D8 2635 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 LGALS3P17931 250 aaKnown RBP14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 ZFAND6Q6FIF0 208 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 UNQ9165/PRO28630Q6UXU0 137 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 Q6YL49 198 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 TEX29Q8N6K0 151 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 VPREB3Q9UKI3 123 aa14.22□□□□□ -0.13
SEMA3B-210ENST00000611067 SUMO4Q6EEV6 95 aa14.21□□□□□ -0.13
SEMA3B-210ENST00000611067 TEX15Q9BXT5 2789 aa14.21□□□□□ -0.13
SEMA3B-210ENST00000611067 ANAPC13Q9BS18 74 aa14.21□□□□□ -0.14
SEMA3B-210ENST00000611067 H3BUA1 57 aa14.2□□□□□ -0.14
SEMA3B-210ENST00000611067 NDUFA4O00483 81 aa14.2□□□□□ -0.14
SEMA3B-210ENST00000611067 A4D1N5 150 aa14.2□□□□□ -0.14
SEMA3B-210ENST00000611067 F6UB75 175 aa14.2□□□□□ -0.14
SEMA3B-210ENST00000611067 IGHV3-33P01772 117 aa14.2□□□□□ -0.14
SEMA3B-210ENST00000611067 TRBV27A0A0K0K1C4 114 aa14.19□□□□□ -0.14
SEMA3B-210ENST00000611067 SDHAF1A6NFY7 115 aa14.19□□□□□ -0.14
SEMA3B-210ENST00000611067 C9JAW5 83 aa14.19□□□□□ -0.14
SEMA3B-210ENST00000611067 DEFB104AQ8WTQ1 72 aa14.19□□□□□ -0.14
SEMA3B-210ENST00000611067 CITED1Q99966 193 aa14.19□□□□□ -0.14
SEMA3B-210ENST00000611067 PDZD2O15018 2839 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 ITPR2Q14571 2701 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 A0A0B4J2C4 111 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 P0DMU3 169 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 FAM231AP0DMU4 169 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 FAM231CP0DMU5 169 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 TMEM263Q8WUH6 116 aaKnown RBP14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 RAX2Q96IS3 184 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 JPT2Q9H910 190 aa14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 FLNAP21333 2647 aaKnown RBP14.18□□□□□ -0.14
SEMA3B-210ENST00000611067 TRBV6-5A0A0K0K1A5 114 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 LEPROTO15243 131 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 EIF4EBP3O60516 100 aaPredicted RBP14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 BRI3O95415 125 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 PF4V1P10720 104 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 TLN2Q9Y4G6 2542 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 TRBV12-3P01733 135 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 SRD5A1P18405 259 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 ZNF580Q9UK33 172 aa14.17□□□□□ -0.14
SEMA3B-210ENST00000611067 KLLNB2CW77 178 aa14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 RPL11P62913 178 aaKnown RBP14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 FAM159AQ6UWV7 190 aa14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 TRPT1Q86TN4 253 aaKnown RBP14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 USMG5Q96IX5 58 aa14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 ZNF469Q96JG9 3925 aaPredicted RBP14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 TMEM223A0PJW6 202 aa14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 F5H697 171 aa14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 LGALS9O00182 355 aa14.16□□□□□ -0.14
SEMA3B-210ENST00000611067 A0A087WWL8 130 aa14.15□□□□□ -0.14
SEMA3B-210ENST00000611067 TMEM95Q3KNT9 176 aa14.15□□□□□ -0.14
SEMA3B-210ENST00000611067 FASNP49327 2511 aaKnown RBP14.15□□□□□ -0.14
SEMA3B-210ENST00000611067 IGLV1-40P01703 118 aa14.14□□□□□ -0.15
SEMA3B-210ENST00000611067 GAGE5Q13069 117 aa14.14□□□□□ -0.15
SEMA3B-210ENST00000611067 GAGE6Q13070 117 aa14.14□□□□□ -0.15
SEMA3B-210ENST00000611067 TRAV2A0A0B4J234 112 aa14.13□□□□□ -0.15
SEMA3B-210ENST00000611067 CFHR3Q02985 330 aa14.13□□□□□ -0.15
SEMA3B-210ENST00000611067 MUSTN1Q8IVN3 82 aa14.13□□□□□ -0.15
SEMA3B-210ENST00000611067 LINC01600Q96MT4 127 aa14.13□□□□□ -0.15
SEMA3B-210ENST00000611067 HECTD1Q9ULT8 2610 aa14.13□□□□□ -0.15
SEMA3B-210ENST00000611067 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.13□□□□□ -0.15
SEMA3B-210ENST00000611067 RHODO00212 210 aa14.13□□□□□ -0.15
SEMA3B-210ENST00000611067 NSUN5P1Q3KNT7 163 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms