RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 LGALS3P17931 250 aaKnown RBP12.64□□□□□ -0.39
EWSR1-221ENST00000610553 ZNF580Q9UK33 172 aa12.64□□□□□ -0.39
EWSR1-221ENST00000610553 PRB1P04280 392 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 PSMB8P28062 276 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 FHL3Q13643 280 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 TMEM95Q3KNT9 176 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 SBSPONQ8IVN8 264 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 PTH2Q96A98 100 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 OPRPNQ99935 248 aaPredicted RBP12.63□□□□□ -0.39
EWSR1-221ENST00000610553 TMEM223A0PJW6 202 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 P0DMU3 169 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 FAM231AP0DMU4 169 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 FAM231CP0DMU5 169 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 TRPT1Q86TN4 253 aaKnown RBP12.63□□□□□ -0.39
EWSR1-221ENST00000610553 TEN1Q86WV5 123 aa12.63□□□□□ -0.39
EWSR1-221ENST00000610553 PRO1854Q9UHT4 67 aa12.62□□□□□ -0.39
EWSR1-221ENST00000610553 A0A1B0GV72 72 aa12.62□□□□□ -0.39
EWSR1-221ENST00000610553 LEPROTO15243 131 aa12.62□□□□□ -0.39
EWSR1-221ENST00000610553 TCTEX1D4Q5JR98 221 aa12.62□□□□□ -0.39
EWSR1-221ENST00000610553 MSMBP08118 114 aa12.61□□□□□ -0.39
EWSR1-221ENST00000610553 C20orf203Q8NBC4 194 aa12.61□□□□□ -0.39
EWSR1-221ENST00000610553 PPDPFLQ8WWR9 84 aa12.61□□□□□ -0.39
EWSR1-221ENST00000610553 CARD19Q96LW7 228 aa12.61□□□□□ -0.39
EWSR1-221ENST00000610553 IGHV1OR15-1A0A075B7D0 117 aa12.61□□□□□ -0.39
EWSR1-221ENST00000610553 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
EWSR1-221ENST00000610553 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
EWSR1-221ENST00000610553 CCL19Q99731 98 aa12.61□□□□□ -0.39
EWSR1-221ENST00000610553 IGHV4-30-2A0A087WSY4 118 aa12.6□□□□□ -0.39
EWSR1-221ENST00000610553 EIF4EBP3O60516 100 aaPredicted RBP12.6□□□□□ -0.39
EWSR1-221ENST00000610553 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
EWSR1-221ENST00000610553 K7EQG2 157 aa12.6□□□□□ -0.39
EWSR1-221ENST00000610553 UBR5O95071 2799 aaPredicted RBP12.59□□□□□ -0.39
EWSR1-221ENST00000610553 A4D1N5 150 aa12.59□□□□□ -0.39
EWSR1-221ENST00000610553 RHODO00212 210 aa12.59□□□□□ -0.39
EWSR1-221ENST00000610553 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
EWSR1-221ENST00000610553 BBC3Q96PG8 261 aaPredicted RBP12.59□□□□□ -0.39
EWSR1-221ENST00000610553 POLQO75417 2590 aa12.59□□□□□ -0.39
EWSR1-221ENST00000610553 I3L3M4 83 aa12.59□□□□□ -0.39
EWSR1-221ENST00000610553 AVPP01185 164 aa12.59□□□□□ -0.39
EWSR1-221ENST00000610553 NBPF19A0A087WUL8 3843 aa12.58□□□□□ -0.39
EWSR1-221ENST00000610553 IGLV4-3A0A075B6K6 122 aa12.58□□□□□ -0.4
EWSR1-221ENST00000610553 A8MWV9 139 aa12.58□□□□□ -0.4
EWSR1-221ENST00000610553 C10orf99Q6UWK7 81 aa12.58□□□□□ -0.4
EWSR1-221ENST00000610553 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.57□□□□□ -0.49e-14■■■■■ 43.8
EWSR1-221ENST00000610553 FBN2P35556 2912 aa12.57□□□□□ -0.4
EWSR1-221ENST00000610553 A0A0B4J2C4 111 aa12.57□□□□□ -0.4
EWSR1-221ENST00000610553 TGFAP01135 160 aa12.57□□□□□ -0.4
EWSR1-221ENST00000610553 IGHV3-33P01772 117 aa12.57□□□□□ -0.4
EWSR1-221ENST00000610553 CRYBA4P53673 196 aa12.57□□□□□ -0.4
EWSR1-221ENST00000610553 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
EWSR1-221ENST00000610553 SCGB1C2P0DMR2 95 aa12.56□□□□□ -0.4
EWSR1-221ENST00000610553 IGHV3-64A0A075B6Q5 118 aa12.56□□□□□ -0.4
EWSR1-221ENST00000610553 A0A0J9YXV3 536 aa12.56□□□□□ -0.4
EWSR1-221ENST00000610553 ATP5J2P56134 94 aa12.56□□□□□ -0.4
EWSR1-221ENST00000610553 Q6ZUT4 128 aa12.56□□□□□ -0.4
EWSR1-221ENST00000610553 ANKRD29Q8N6D5 301 aa12.56□□□□□ -0.4
EWSR1-221ENST00000610553 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 MT-ATP8P03928 68 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 XGP55808 180 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 RNF152Q8N8N0 203 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 TRAV2A0A0B4J234 112 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 CKS1BP61024 79 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 RAX2Q96IS3 184 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 VCX2Q9H322 139 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
EWSR1-221ENST00000610553 SPINK8P0C7L1 97 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 CSPG4Q6UVK1 2322 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 TMEM89A2RUT3 159 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 M0QXV9 152 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 M0R2P5 195 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 FAM104AQ969W3 186 aa12.54□□□□□ -0.4
EWSR1-221ENST00000610553 PYGO1Q9Y3Y4 419 aa12.53□□□□□ -0.4
EWSR1-221ENST00000610553 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
EWSR1-221ENST00000610553 SLC25A20O43772 301 aa12.53□□□□□ -0.4
EWSR1-221ENST00000610553 ERG28Q9UKR5 140 aa12.53□□□□□ -0.4
EWSR1-221ENST00000610553 PTPN13Q12923 2485 aa12.52□□□□□ -0.41
EWSR1-221ENST00000610553 ABCA12Q86UK0 2595 aa12.52□□□□□ -0.41
EWSR1-221ENST00000610553 A0A0J9YXY3 114 aa12.52□□□□□ -0.41
EWSR1-221ENST00000610553 B4DSR2 109 aa12.52□□□□□ -0.41
EWSR1-221ENST00000610553 RBMY1A1P0DJD3 496 aaKnown RBP12.52□□□□□ -0.41
EWSR1-221ENST00000610553 RBMY1CP0DJD4 496 aa12.52□□□□□ -0.41
EWSR1-221ENST00000610553 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
EWSR1-221ENST00000610553 RBMY1FQ15415 496 aaKnown RBP12.52□□□□□ -0.41
EWSR1-221ENST00000610553 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.51□□□□□ -0.41
EWSR1-221ENST00000610553 IGHV3-30-3P0DP02 117 aa12.51□□□□□ -0.41
EWSR1-221ENST00000610553 MRPS36P82909 103 aaKnown RBP12.51□□□□□ -0.41
EWSR1-221ENST00000610553 SORL1Q92673 2214 aa12.51□□□□□ -0.41
EWSR1-221ENST00000610553 USP9YO00507 2555 aaPredicted RBP12.51□□□□□ -0.41
EWSR1-221ENST00000610553 LITAFQ99732 161 aa12.51□□□□□ -0.41
EWSR1-221ENST00000610553 C9JAW5 83 aa12.5□□□□□ -0.41
EWSR1-221ENST00000610553 CD28P10747 220 aa12.5□□□□□ -0.41
EWSR1-221ENST00000610553 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
EWSR1-221ENST00000610553 ZANQ9Y493 2812 aa12.49□□□□□ -0.41
EWSR1-221ENST00000610553 TIMM21Q9BVV7 248 aa12.49□□□□□ -0.41
EWSR1-221ENST00000610553 ANKRD17O75179 2603 aaKnown RBP12.49□□□□□ -0.41
EWSR1-221ENST00000610553 H7C2G1 150 aa12.49□□□□□ -0.41
EWSR1-221ENST00000610553 ELANEP08246 267 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms