RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
CTCFL-218ENST00000608440 NACAE9PAV3 2078 aa9.44□□□□□ -0.9
CTCFL-218ENST00000608440 ATRXP46100 2492 aa9.43□□□□□ -0.9
CTCFL-218ENST00000608440 ADAMTSL4-AS1Q5T5F5 129 aa9.43□□□□□ -0.9
CTCFL-218ENST00000608440 SERP2Q8N6R1 65 aa9.43□□□□□ -0.9
CTCFL-218ENST00000608440 IGHV1-18A0A0C4DH31 117 aa9.43□□□□□ -0.9
CTCFL-218ENST00000608440 CCL8P80075 99 aa9.43□□□□□ -0.9
CTCFL-218ENST00000608440 TMEM200BQ69YZ2 307 aa9.43□□□□□ -0.9
CTCFL-218ENST00000608440 FAM215AQ9Y5M1 114 aa9.43□□□□□ -0.9
CTCFL-218ENST00000608440 IGHV3-66A0A0C4DH42 116 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 SYNJ2BPP57105 145 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 ZNF415Q09FC8 603 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-218ENST00000608440 FAM27E3Q08E93 113 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 ZNF876PQ49A33 203 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 CACNA1AO00555 2505 aa9.42□□□□□ -0.9
CTCFL-218ENST00000608440 PCNX1Q96RV3 2341 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 M0R1W7 72 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 LOXP28300 417 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-218ENST00000608440 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 WNK2Q9Y3S1 2297 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 S100A4P26447 101 aaKnown RBP9.41□□□□□ -0.9
CTCFL-218ENST00000608440 TIRAPP58753 221 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 FHL2Q14192 279 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 TACC2O95359 2948 aa9.41□□□□□ -0.9
CTCFL-218ENST00000608440 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
CTCFL-218ENST00000608440 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.9
CTCFL-218ENST00000608440 TMEM86BQ8N661 226 aa9.4□□□□□ -0.9
CTCFL-218ENST00000608440 NBASA2RRP1 2371 aa9.4□□□□□ -0.9
CTCFL-218ENST00000608440 TPRP12270 2363 aaKnown RBP9.4□□□□□ -0.9
CTCFL-218ENST00000608440 IGHV4-4A0A075B6R2 117 aa9.4□□□□□ -0.91
CTCFL-218ENST00000608440 FAM223AQ8IWN6 122 aa9.4□□□□□ -0.91
CTCFL-218ENST00000608440 DAND5Q8N907 189 aa9.4□□□□□ -0.91
CTCFL-218ENST00000608440 ROS1P08922 2347 aa9.39□□□□□ -0.91
CTCFL-218ENST00000608440 IGHV1-69DA0A0B4J2H0 117 aa9.39□□□□□ -0.91
CTCFL-218ENST00000608440 A0A0J9YXV3 536 aa9.39□□□□□ -0.91
CTCFL-218ENST00000608440 GPHB5Q86YW7 130 aa9.39□□□□□ -0.91
CTCFL-218ENST00000608440 LITAFQ99732 161 aa9.39□□□□□ -0.91
CTCFL-218ENST00000608440 PHLDA3Q9Y5J5 127 aa9.39□□□□□ -0.91
CTCFL-218ENST00000608440 V9GYY9 64 aa9.39□□□□□ -0.91
CTCFL-218ENST00000608440 NXPH4O95158 308 aa9.38□□□□□ -0.91
CTCFL-218ENST00000608440 MALRD1Q5VYJ5 2156 aa9.38□□□□□ -0.91
CTCFL-218ENST00000608440 IGF1P05019 195 aa9.38□□□□□ -0.91
CTCFL-218ENST00000608440 NDPQ00604 133 aa9.38□□□□□ -0.91
CTCFL-218ENST00000608440 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
CTCFL-218ENST00000608440 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
CTCFL-218ENST00000608440 PRR9Q5T870 116 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 A8MZ25 164 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 M0R1B8 84 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 BAALC-AS2P0C853 105 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 TMEM61Q8N0U2 210 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 C9orf85Q96MD7 179 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 DYNLRB1Q9NP97 96 aa9.37□□□□□ -0.91
CTCFL-218ENST00000608440 USP17L23D6RBM5 183 aa9.36□□□□□ -0.91
CTCFL-218ENST00000608440 LY6LH3BQJ8 138 aa9.36□□□□□ -0.91
CTCFL-218ENST00000608440 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
CTCFL-218ENST00000608440 TIMM17AQ99595 171 aa9.36□□□□□ -0.91
CTCFL-218ENST00000608440 ITPR1Q14643 2758 aa9.35□□□□□ -0.91
CTCFL-218ENST00000608440 IGHV3OR16-10A0A075B7F0 116 aa9.35□□□□□ -0.91
CTCFL-218ENST00000608440 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
CTCFL-218ENST00000608440 IGHV1-46P01743 117 aa9.35□□□□□ -0.91
CTCFL-218ENST00000608440 C9orf139Q6ZV77 190 aa9.35□□□□□ -0.91
CTCFL-218ENST00000608440 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
CTCFL-218ENST00000608440 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
CTCFL-218ENST00000608440 F5H697 171 aa9.34□□□□□ -0.91
CTCFL-218ENST00000608440 F8W735 103 aaPredicted RBP9.34□□□□□ -0.91
CTCFL-218ENST00000608440 IGLV1-44P01699 117 aa9.34□□□□□ -0.91
CTCFL-218ENST00000608440 TMEM243Q9BU79 118 aa9.34□□□□□ -0.91
CTCFL-218ENST00000608440 PRORYQ9H606 182 aa9.34□□□□□ -0.91
CTCFL-218ENST00000608440 MIAQ16674 131 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 LYPD2Q6UXB3 125 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 IGHV1-3A0A0C4DH29 117 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 AVPP01185 164 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 C16orf92Q96LL3 132 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 NDUFA12Q9UI09 145 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 A0A0J9YX75 114 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 BRK1Q8WUW1 75 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 Q9HAA7 133 aa9.33□□□□□ -0.92
CTCFL-218ENST00000608440 ACACBO00763 2458 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 A0A087WWL8 130 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 A0A0U1RRA0 63 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 GNRH2O43555 120 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 VCYO14598 125 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 SLC25A15Q9Y619 301 aa9.32□□□□□ -0.92
CTCFL-218ENST00000608440 COL6A6A6NMZ7 2263 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
CTCFL-218ENST00000608440 C20orf197Q8N268 126 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms