RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CDC34P49427 236 aaPredicted RBP7.31□□□□□ -1.24
PDLIM1P1-201ENST00000604187 PRR27Q6MZM9 219 aa7.31□□□□□ -1.24
PDLIM1P1-201ENST00000604187 Q86TA4 180 aa7.31□□□□□ -1.24
PDLIM1P1-201ENST00000604187 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 SH2D1AO60880 128 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 NDUFS6O75380 124 aaKnown RBP7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 CRIP1P50238 77 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 RAB4BP61018 213 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 SRSF9Q13242 221 aaKnown RBP eCLIP7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 XP32Q5T750 250 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 PRSS3P2Q8NHM4 247 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 SUN5Q8TC36 379 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 DERL1Q9BUN8 251 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 WFDC1Q9HC57 220 aa7.3□□□□□ -1.24
PDLIM1P1-201ENST00000604187 TRBV25-1A0A075B6N4 114 aa7.29□□□□□ -1.24
PDLIM1P1-201ENST00000604187 TRAV8-4A0A0B4J246 113 aa7.29□□□□□ -1.24
PDLIM1P1-201ENST00000604187 P01737 135 aa7.29□□□□□ -1.24
PDLIM1P1-201ENST00000604187 TMEM97Q5BJF2 176 aa7.29□□□□□ -1.24
PDLIM1P1-201ENST00000604187 RAB24Q969Q5 203 aa7.29□□□□□ -1.24
PDLIM1P1-201ENST00000604187 TRBV6-1A0A0K0K1D8 114 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 H7C1H1 209 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 RPL12P30050 165 aaKnown RBP7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 RPS10P46783 165 aaKnown RBP7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 FAM162BQ5T6X4 162 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 C15orf56Q8N910 161 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 C20orf203Q8NBC4 194 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 PPP1R1CQ8WVI7 109 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 GFRA4Q9GZZ7 299 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 TMEM167BQ9NRX6 74 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 VAX2Q9UIW0 290 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 FSIP2Q5CZC0 6907 aa7.28□□□□□ -1.24
PDLIM1P1-201ENST00000604187 A0A096LNI7 61 aa7.27□□□□□ -1.25
PDLIM1P1-201ENST00000604187 F5H697 171 aa7.27□□□□□ -1.25
PDLIM1P1-201ENST00000604187 IFNA7P01567 189 aa7.27□□□□□ -1.25
PDLIM1P1-201ENST00000604187 CYCSP99999 105 aaKnown RBP7.27□□□□□ -1.25
PDLIM1P1-201ENST00000604187 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
PDLIM1P1-201ENST00000604187 HIGD2BQ4VC39 106 aa7.27□□□□□ -1.25
PDLIM1P1-201ENST00000604187 Q6ZRP5 223 aa7.27□□□□□ -1.25
PDLIM1P1-201ENST00000604187 IGHV1-24A0A0C4DH33 117 aa7.26□□□□□ -1.25
PDLIM1P1-201ENST00000604187 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
PDLIM1P1-201ENST00000604187 FAM231BA6NCW3 169 aa7.26□□□□□ -1.25
PDLIM1P1-201ENST00000604187 PEX7O00628 323 aa7.26□□□□□ -1.25
PDLIM1P1-201ENST00000604187 GZMBP10144 247 aa7.26□□□□□ -1.25
PDLIM1P1-201ENST00000604187 H2BFSP57053 126 aa7.26□□□□□ -1.25
PDLIM1P1-201ENST00000604187 OR10AG1Q8NH19 301 aa7.26□□□□□ -1.25
PDLIM1P1-201ENST00000604187 IGLV4-60A0A075B6I1 120 aa7.25□□□□□ -1.25
PDLIM1P1-201ENST00000604187 GAGE12HA6NDE8 117 aa7.25□□□□□ -1.25
PDLIM1P1-201ENST00000604187 MPC2O95563 127 aa7.25□□□□□ -1.25
PDLIM1P1-201ENST00000604187 CXorf1O96002 111 aa7.25□□□□□ -1.25
PDLIM1P1-201ENST00000604187 PET100P0DJ07 73 aa7.25□□□□□ -1.25
PDLIM1P1-201ENST00000604187 CFAP161Q6P656 301 aa7.25□□□□□ -1.25
PDLIM1P1-201ENST00000604187 MUC21A0A140T8X8 626 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 A0A1W2PRE2 83 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 SULT1A2P50226 295 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 DEFA3P59666 94 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 UBE2G2P60604 165 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 COX8CQ7Z4L0 72 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 AQP10Q96PS8 301 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 LINC00474Q9P2X8 69 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
PDLIM1P1-201ENST00000604187 ZNF674Q2M3X9 581 aa7.23□□□□□ -1.25
PDLIM1P1-201ENST00000604187 INO80EQ8NBZ0 244 aaPredicted RBP7.23□□□□□ -1.25
PDLIM1P1-201ENST00000604187 ZNF471Q9BX82 626 aaPredicted RBP7.23□□□□□ -1.25
PDLIM1P1-201ENST00000604187 TRAV26-2A0A0B4J265 109 aa7.22□□□□□ -1.25
PDLIM1P1-201ENST00000604187 A0A1B0GUV1 79 aa7.22□□□□□ -1.25
PDLIM1P1-201ENST00000604187 ZNF664Q8N3J9 261 aa7.22□□□□□ -1.25
PDLIM1P1-201ENST00000604187 HIST1H2BAQ96A08 127 aa7.22□□□□□ -1.25
PDLIM1P1-201ENST00000604187 TMEM243Q9BU79 118 aa7.22□□□□□ -1.25
PDLIM1P1-201ENST00000604187 ACTR3CQ9C0K3 210 aaPredicted RBP7.22□□□□□ -1.25
PDLIM1P1-201ENST00000604187 GVQW2A0A096LPI5 108 aaPredicted RBP7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 IGKV3OR2-268A0A0C4DH90 116 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 MBP02144 154 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 SSTP61278 116 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 UBE2G1P62253 170 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 CACNG7P62955 275 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 SPANXN1Q5VSR9 72 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 MZT2BQ6NZ67 158 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 PSORS1C2Q9UIG4 136 aa7.21□□□□□ -1.26
PDLIM1P1-201ENST00000604187 SMIM17P0DL12 118 aa7.2□□□□□ -1.26
PDLIM1P1-201ENST00000604187 ATP6V0CP27449 155 aa7.2□□□□□ -1.26
PDLIM1P1-201ENST00000604187 PRR4Q16378 134 aa7.2□□□□□ -1.26
PDLIM1P1-201ENST00000604187 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
PDLIM1P1-201ENST00000604187 FMC1Q96HJ9 113 aa7.2□□□□□ -1.26
PDLIM1P1-201ENST00000604187 PSMG3Q9BT73 122 aaPredicted RBP7.2□□□□□ -1.26
PDLIM1P1-201ENST00000604187 FAM74A7A6NL05 159 aa7.19□□□□□ -1.26
PDLIM1P1-201ENST00000604187 UBE2L6O14933 153 aa7.19□□□□□ -1.26
PDLIM1P1-201ENST00000604187 LTAP01374 205 aa7.19□□□□□ -1.26
PDLIM1P1-201ENST00000604187 AP1S3Q96PC3 154 aa7.19□□□□□ -1.26
PDLIM1P1-201ENST00000604187 CCDC32Q9BV29 185 aa7.19□□□□□ -1.26
PDLIM1P1-201ENST00000604187 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
PDLIM1P1-201ENST00000604187 M0QY20 66 aa7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 SNAI2O43623 268 aa7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 MGPP08493 103 aa7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 NKX2-5P52952 324 aaPredicted RBP7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 SERF2P84101 59 aa7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 ZNF726P1Q15940 193 aa7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 ENKURQ8TC29 256 aa7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
PDLIM1P1-201ENST00000604187 SSNA1O43805 119 aa7.17□□□□□ -1.26
PDLIM1P1-201ENST00000604187 CXCL1P09341 107 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms