RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 BPIFA4PQ86YQ2 179 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 LRRC20Q8TCA0 184 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 PTH2Q96A98 100 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 SAMD10Q9BYL1 202 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 OR51M1Q9H341 326 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 SCN3BQ9NY72 215 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 COPZ2Q9P299 210 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 SSR3Q9UNL2 185 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 TRAV26-2A0A0B4J265 109 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 H0Y8G0 127 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 ATP5HO75947 161 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 TCRBP04435 133 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 SEC11BP0C7V7 166 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 TLX1NBP0CAT3 122 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 MGST1P10620 155 aaKnown RBP2.43□□□□□ -2.02
VRK3-222ENST00000601324 IAPPP10997 89 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 GUK1Q16774 197 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 TMEM75Q8N9X5 138 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 RNASE11Q8TAA1 199 aaKnown RBP2.43□□□□□ -2.02
VRK3-222ENST00000601324 ZFAND1Q8TCF1 268 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 S100A16Q96FQ6 103 aaKnown RBP2.43□□□□□ -2.02
VRK3-222ENST00000601324 SRRQ9GZT4 340 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 ARL6Q9H0F7 186 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 RPP21Q9H633 154 aaKnown RBP2.43□□□□□ -2.02
VRK3-222ENST00000601324 TPRKBQ9Y3C4 175 aa2.43□□□□□ -2.02
VRK3-222ENST00000601324 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
VRK3-222ENST00000601324 IGLV1-50A0A075B6I6 118 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 IGHV3-73A0A0B4J1V6 119 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 FNDC10F2Z333 226 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 TYMSP04818 313 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 SLC25A6P12236 298 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 ZNF138P52744 262 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 COX6A2Q02221 97 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 AKR1C1Q04828 323 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 MXD1Q05195 221 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 SLC38A11Q08AI6 406 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 ELOBQ15370 118 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 SURF2Q15527 256 aaPredicted RBP2.42□□□□□ -2.02
VRK3-222ENST00000601324 TPRXLQ17RH7 258 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 MPV17L2Q567V2 206 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 RNASE10Q5GAN6 216 aaKnown RBP2.42□□□□□ -2.02
VRK3-222ENST00000601324 UBE2NLQ5JXB2 153 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 IZUMO2Q6UXV1 221 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 EXOC3-AS1Q8N2X6 119 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 C15orf56Q8N910 161 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 LYPD6BQ8NI32 183 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 SUN5Q8TC36 379 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 SH3BGRL3Q9H299 93 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 TMEM14CQ9P0S9 112 aa2.42□□□□□ -2.02
VRK3-222ENST00000601324 CSDC2Q9Y534 153 aaKnown RBP2.42□□□□□ -2.02
VRK3-222ENST00000601324 A0A096LNI7 61 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 SMIM31A0A1B0GVY4 71 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 PPP1R2P9O14990 202 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 NDUFS6O75380 124 aaKnown RBP2.41□□□□□ -2.02
VRK3-222ENST00000601324 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 TGFBR1P36897 503 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 CACNG7P62955 275 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 PDE6HQ13956 83 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 MIAQ16674 131 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 RNASEKQ6P5S7 137 aaKnown RBP2.41□□□□□ -2.02
VRK3-222ENST00000601324 TMEM14EPQ6UXP3 125 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 TEX43Q6ZNM6 134 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 INO80EQ8NBZ0 244 aaPredicted RBP2.41□□□□□ -2.02
VRK3-222ENST00000601324 YIPF6Q96EC8 236 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 TVP23CQ96ET8 276 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 MGST2Q99735 147 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 MTFP1Q9UDX5 166 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 LENEPQ9Y5L5 61 aa2.41□□□□□ -2.02
VRK3-222ENST00000601324 IGLV10-54A0A075B6I4 117 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 LOC105371267A0A1B0GV96 52 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 A0A1B0GVX0 72 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 RBAKDNA6NC62 111 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 H3BP45 60 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 SYNGR2O43760 224 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 RAB3DO95716 219 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 HIST1H1EP10412 219 aaKnown RBP2.4□□□□□ -2.03
VRK3-222ENST00000601324 RNASE3P12724 160 aaKnown RBP2.4□□□□□ -2.03
VRK3-222ENST00000601324 AKR1C4P17516 323 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 RAB31Q13636 194 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 LINC00483Q53H64 154 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 SPANXN5Q5MJ07 72 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 TMEM78Q5T7P6 136 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 S100A7AQ86SG5 101 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 SNX29P2Q8IUI4 249 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 TMEM229BQ8NBD8 167 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 RAB2BQ8WUD1 216 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 DPH3Q96FX2 82 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 FAM167A-AS1Q96KT0 104 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 CIB3Q96Q77 187 aaPredicted RBP2.4□□□□□ -2.03
VRK3-222ENST00000601324 NDFIP1Q9BT67 221 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 NPVFQ9HCQ7 196 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 PSG8Q9UQ74 426 aa2.4□□□□□ -2.03
VRK3-222ENST00000601324 A0A087WX48 190 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 TRBV6-8A0A0A6YYG3 113 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 IGKV2-24A0A0C4DH68 120 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 DUXBA0A1W2PPF3 345 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 PGPA6NDG6 321 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms