RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 FAM74A7A6NL05 159 aa10.58□□□□□ -0.72
USE1-208ENST00000600970 LINC00299Q6ZSB3 139 aa10.58□□□□□ -0.72
USE1-208ENST00000600970 NDUFA13Q9P0J0 144 aa10.58□□□□□ -0.72
USE1-208ENST00000600970 VAX2Q9UIW0 290 aa10.58□□□□□ -0.72
USE1-208ENST00000600970 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.57□□□□□ -0.72
USE1-208ENST00000600970 TRBV6-1A0A0K0K1D8 114 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 REG3AQ06141 175 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 OR10AG1Q8NH19 301 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 C7orf33Q8WU49 177 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 FMC1Q96HJ9 113 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 DERL1Q9BUN8 251 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 NKX6-2Q9C056 277 aaPredicted RBP10.57□□□□□ -0.72
USE1-208ENST00000600970 AP5S1Q9NUS5 200 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 KIF25-AS1Q9Y6Z4 181 aa10.57□□□□□ -0.72
USE1-208ENST00000600970 TRBV25-1A0A075B6N4 114 aa10.56□□□□□ -0.72
USE1-208ENST00000600970 UBE2G1P62253 170 aa10.56□□□□□ -0.72
USE1-208ENST00000600970 AQP10Q96PS8 301 aa10.56□□□□□ -0.72
USE1-208ENST00000600970 CTXND1A0A1B0GTU2 59 aa10.55□□□□□ -0.72
USE1-208ENST00000600970 LTAP01374 205 aa10.55□□□□□ -0.72
USE1-208ENST00000600970 ZNF471Q9BX82 626 aaPredicted RBP10.55□□□□□ -0.72
USE1-208ENST00000600970 F5H697 171 aa10.54□□□□□ -0.72
USE1-208ENST00000600970 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
USE1-208ENST00000600970 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
USE1-208ENST00000600970 TRAV8-4A0A0B4J246 113 aa10.53□□□□□ -0.72
USE1-208ENST00000600970 A0A0J9YXV3 536 aa10.53□□□□□ -0.72
USE1-208ENST00000600970 P01737 135 aa10.53□□□□□ -0.72
USE1-208ENST00000600970 WDR73Q6P4I2 378 aa10.53□□□□□ -0.72
USE1-208ENST00000600970 IGHV1-24A0A0C4DH33 117 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 MUC21A0A0G2JKD1 596 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 MUC21A0A140T8X8 626 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 A6NHS1 94 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 SNAI2O43623 268 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 CXCL1P09341 107 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 RAB5CP51148 216 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 KRTAP10-8P60410 259 aa10.52□□□□□ -0.73
USE1-208ENST00000600970 PRR3P79522 188 aaKnown RBP10.52□□□□□ -0.73
USE1-208ENST00000600970 IGLV4-60A0A075B6I1 120 aa10.51□□□□□ -0.73
USE1-208ENST00000600970 GAS8-AS1O95177 125 aa10.51□□□□□ -0.73
USE1-208ENST00000600970 COX6A2Q02221 97 aa10.51□□□□□ -0.73
USE1-208ENST00000600970 SPANXN1Q5VSR9 72 aa10.51□□□□□ -0.73
USE1-208ENST00000600970 RPL7L1Q6DKI1 246 aaKnown RBP10.51□□□□□ -0.73
USE1-208ENST00000600970 GTSF1Q8WW33 167 aa10.51□□□□□ -0.73
USE1-208ENST00000600970 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
USE1-208ENST00000600970 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
USE1-208ENST00000600970 GZMBP10144 247 aa10.5□□□□□ -0.73
USE1-208ENST00000600970 DEFA3P59666 94 aa10.5□□□□□ -0.73
USE1-208ENST00000600970 SSTP61278 116 aa10.5□□□□□ -0.73
USE1-208ENST00000600970 A0A1B0GUV1 79 aa10.49□□□□□ -0.73
USE1-208ENST00000600970 OR5AL1P0C617 328 aa10.49□□□□□ -0.73
USE1-208ENST00000600970 AKR1C3P42330 323 aa10.49□□□□□ -0.73
USE1-208ENST00000600970 MAJINQ3KP22 176 aa10.49□□□□□ -0.73
USE1-208ENST00000600970 NDUFS6O75380 124 aaKnown RBP10.48□□□□□ -0.73
USE1-208ENST00000600970 SMIM17P0DL12 118 aa10.48□□□□□ -0.73
USE1-208ENST00000600970 C15orf56Q8N910 161 aa10.48□□□□□ -0.73
USE1-208ENST00000600970 PRSS3P2Q8NHM4 247 aa10.48□□□□□ -0.73
USE1-208ENST00000600970 TCEAL7Q9BRU2 100 aa10.48□□□□□ -0.73
USE1-208ENST00000600970 LPAP08519 4548 aa10.47□□□□□ -0.73
USE1-208ENST00000600970 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
USE1-208ENST00000600970 RPS10P46783 165 aaKnown RBP10.47□□□□□ -0.73
USE1-208ENST00000600970 FHITP49789 147 aa10.47□□□□□ -0.73
USE1-208ENST00000600970 Q5BKY6 102 aa10.47□□□□□ -0.73
USE1-208ENST00000600970 CST9LP1Q5W188 147 aa10.47□□□□□ -0.73
USE1-208ENST00000600970 STPG4Q8N801 248 aa10.47□□□□□ -0.73
USE1-208ENST00000600970 LYPD6BQ8NI32 183 aa10.47□□□□□ -0.73
USE1-208ENST00000600970 BORCS7-ASMTA0A0B4J1R7 106 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 MAP1LC3B2A6NCE7 125 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 M0QY20 66 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 AKR1C8PQ5T2L2 129 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 REG3GQ6UW15 175 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 SPINK6Q6UWN8 80 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 STOML3Q8TAV4 291 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 AP1S3Q96PC3 154 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 TMEM243Q9BU79 118 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 MLST8Q9BVC4 326 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 MAP1LC3BQ9GZQ8 125 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 ALG5Q9Y673 324 aa10.46□□□□□ -0.73
USE1-208ENST00000600970 DEFA1P59665 94 aa10.45□□□□□ -0.74
USE1-208ENST00000600970 INO80EQ8NBZ0 244 aaPredicted RBP10.45□□□□□ -0.74
USE1-208ENST00000600970 GAGE12HA6NDE8 117 aa10.44□□□□□ -0.74
USE1-208ENST00000600970 MGPP08493 103 aa10.44□□□□□ -0.74
USE1-208ENST00000600970 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
USE1-208ENST00000600970 CFAP161Q6P656 301 aa10.44□□□□□ -0.74
USE1-208ENST00000600970 SULT1A2P50226 295 aa10.43□□□□□ -0.74
USE1-208ENST00000600970 NKX2-5P52952 324 aaPredicted RBP10.43□□□□□ -0.74
USE1-208ENST00000600970 SUMO4Q6EEV6 95 aa10.43□□□□□ -0.74
USE1-208ENST00000600970 BAGE2Q86Y30 109 aa10.43□□□□□ -0.74
USE1-208ENST00000600970 H7C1H1 209 aa10.42□□□□□ -0.74
USE1-208ENST00000600970 PAGE4O60829 102 aa10.42□□□□□ -0.74
USE1-208ENST00000600970 S100A9P06702 114 aaKnown RBP10.42□□□□□ -0.74
USE1-208ENST00000600970 SRSF9Q13242 221 aaKnown RBP eCLIP10.42□□□□□ -0.74
USE1-208ENST00000600970 A0A096LNI7 61 aa10.41□□□□□ -0.74
USE1-208ENST00000600970 SCO2A0A1W2PP80 73 aa10.41□□□□□ -0.74
USE1-208ENST00000600970 PGLYRP4Q96LB8 373 aa10.41□□□□□ -0.74
USE1-208ENST00000600970 UBE2L6O14933 153 aa10.4□□□□□ -0.74
USE1-208ENST00000600970 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
USE1-208ENST00000600970 RASL11AQ6T310 242 aa10.39□□□□□ -0.75
USE1-208ENST00000600970 MED28Q9H204 178 aa10.39□□□□□ -0.75
USE1-208ENST00000600970 FXYD6-FXYD2A0A087WZ82 144 aa10.38□□□□□ -0.75
USE1-208ENST00000600970 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
USE1-208ENST00000600970 AMTP48728 403 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms