RNA–Protein interactions for RNA: ENST00000600962.5

SOX2-OT-235, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 472 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-235ENST00000600962 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
SOX2-OT-235ENST00000600962 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
SOX2-OT-235ENST00000600962 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
SOX2-OT-235ENST00000600962 Q8N3U1 123 aa9.19□□□□□ -0.94
SOX2-OT-235ENST00000600962 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
SOX2-OT-235ENST00000600962 DNAH17Q9UFH2 4485 aa9.19□□□□□ -0.94
SOX2-OT-235ENST00000600962 HECTD4Q9Y4D8 3996 aa9.19□□□□□ -0.94
SOX2-OT-235ENST00000600962 TRAV9-2A0A087WT02 112 aa9.18□□□□□ -0.94
SOX2-OT-235ENST00000600962 BTF3P20290 206 aaKnown RBP9.18□□□□□ -0.94
SOX2-OT-235ENST00000600962 TNP2Q05952 138 aa9.18□□□□□ -0.94
SOX2-OT-235ENST00000600962 TRAV26-2A0A0B4J265 109 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 H7C1H1 209 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 K7EP13 123 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 Q6ZRN7 208 aaPredicted RBP9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 NUP35Q8NFH5 326 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 BORCS7Q96B45 105 aa9.17□□□□□ -0.94
SOX2-OT-235ENST00000600962 SMIM15Q7Z3B0 74 aa9.16□□□□□ -0.94
SOX2-OT-235ENST00000600962 C10orf126Q8N4M7 172 aa9.16□□□□□ -0.94
SOX2-OT-235ENST00000600962 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
SOX2-OT-235ENST00000600962 DNAJC30Q96LL9 226 aa9.16□□□□□ -0.94
SOX2-OT-235ENST00000600962 TRBV6-8A0A0A6YYG3 113 aa9.15□□□□□ -0.94
SOX2-OT-235ENST00000600962 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
SOX2-OT-235ENST00000600962 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
SOX2-OT-235ENST00000600962 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-235ENST00000600962 NIT1Q86X76 327 aa9.15□□□□□ -0.94
SOX2-OT-235ENST00000600962 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.94
SOX2-OT-235ENST00000600962 NAT8BQ9UHF3 227 aa9.15□□□□□ -0.94
SOX2-OT-235ENST00000600962 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
SOX2-OT-235ENST00000600962 NIT2Q9NQR4 276 aa9.14□□□□□ -0.95
SOX2-OT-235ENST00000600962 ADCYAP1P18509 176 aa9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 NFE4Q86UQ8 179 aa9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 RNF185Q96GF1 192 aa9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 TMEM191AQ9H0A3 160 aa9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 BIRC6Q9NR09 4857 aa9.13□□□□□ -0.95
SOX2-OT-235ENST00000600962 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
SOX2-OT-235ENST00000600962 PNRC1Q12796 327 aaPredicted RBP9.12□□□□□ -0.95
SOX2-OT-235ENST00000600962 RIGQ13278 110 aa9.12□□□□□ -0.95
SOX2-OT-235ENST00000600962 FRZBQ92765 325 aa9.12□□□□□ -0.95
SOX2-OT-235ENST00000600962 PKD1P98161 4303 aa9.11□□□□□ -0.95
SOX2-OT-235ENST00000600962 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
SOX2-OT-235ENST00000600962 LAGE3Q14657 143 aa9.11□□□□□ -0.95
SOX2-OT-235ENST00000600962 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
SOX2-OT-235ENST00000600962 COMMD7Q86VX2 200 aa9.11□□□□□ -0.95
SOX2-OT-235ENST00000600962 AMN1Q8IY45 258 aa9.11□□□□□ -0.95
SOX2-OT-235ENST00000600962 Q9HAA7 133 aa9.11□□□□□ -0.95
SOX2-OT-235ENST00000600962 PPP1R2P9O14990 202 aa9.1□□□□□ -0.95
SOX2-OT-235ENST00000600962 RAB4AP20338 218 aa9.1□□□□□ -0.95
SOX2-OT-235ENST00000600962 IQCJQ1A5X6 159 aa9.1□□□□□ -0.95
SOX2-OT-235ENST00000600962 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
SOX2-OT-235ENST00000600962 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
SOX2-OT-235ENST00000600962 CHCHD7Q9BUK0 85 aa9.1□□□□□ -0.95
SOX2-OT-235ENST00000600962 URGCP-MRPS24S4R325 110 aa9.1□□□□□ -0.95
SOX2-OT-235ENST00000600962 TRBV25-1A0A075B6N4 114 aa9.09□□□□□ -0.95
SOX2-OT-235ENST00000600962 A0A087WX48 190 aa9.09□□□□□ -0.95
SOX2-OT-235ENST00000600962 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
SOX2-OT-235ENST00000600962 MPV17L2Q567V2 206 aa9.09□□□□□ -0.95
SOX2-OT-235ENST00000600962 MRPL54Q6P161 138 aaKnown RBP9.09□□□□□ -0.95
SOX2-OT-235ENST00000600962 IGHV1-24A0A0C4DH33 117 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 A0A1B0GXF2 115 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 TMEM262E9PQX1 116 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 F8W036 122 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 MT-ND4LP03901 98 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 RPS10P46783 165 aaKnown RBP9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 CAMPP49913 170 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 KCNIP4Q6PIL6 250 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 MRAP2Q96G30 205 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
SOX2-OT-235ENST00000600962 TRBV6-5A0A0K0K1A5 114 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 A0A1B0GW15 77 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 SDHAF1A6NFY7 115 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 SMKR1H3BMG3 65 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 NCR2O95944 276 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 HBBP68871 147 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 GAGE6Q13070 117 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 COTL1Q14019 142 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 Q8N976 141 aa9.07□□□□□ -0.96
SOX2-OT-235ENST00000600962 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
SOX2-OT-235ENST00000600962 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
SOX2-OT-235ENST00000600962 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
SOX2-OT-235ENST00000600962 MRPL51Q4U2R6 128 aaKnown RBP9.06□□□□□ -0.96
SOX2-OT-235ENST00000600962 ATRAIDQ6UW56 229 aa9.06□□□□□ -0.96
SOX2-OT-235ENST00000600962 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
SOX2-OT-235ENST00000600962 SEC11CQ9BY50 192 aa9.06□□□□□ -0.96
SOX2-OT-235ENST00000600962 A0A087WTM6 91 aa9.05□□□□□ -0.96
SOX2-OT-235ENST00000600962 AMTP48728 403 aa9.05□□□□□ -0.96
SOX2-OT-235ENST00000600962 PKIAP61925 76 aa9.05□□□□□ -0.96
SOX2-OT-235ENST00000600962 RBX1P62877 108 aa9.05□□□□□ -0.96
SOX2-OT-235ENST00000600962 ELOBQ15370 118 aa9.05□□□□□ -0.96
SOX2-OT-235ENST00000600962 SPATA12Q7Z6I5 190 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms