RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PRO0461Q9UI25 63 aa14.91□□□□□ -0.02
SHKBP1-225ENST00000600733 ZNF702PQ9H963 129 aa14.9□□□□□ -0.02
SHKBP1-225ENST00000600733 ZFYVE26Q68DK2 2539 aa14.9□□□□□ -0.02
SHKBP1-225ENST00000600733 APOMO95445 188 aa14.9□□□□□ -0.02
SHKBP1-225ENST00000600733 DEFB136Q30KP8 78 aa14.9□□□□□ -0.02
SHKBP1-225ENST00000600733 LRRK2Q5S007 2527 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 KNCNA6PVL3 124 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 TCTEX1D4Q5JR98 221 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 C18orf65Q6ZTR6 163 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 ELANEP08246 267 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 RHOHQ15669 191 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 UBE2E2Q96LR5 201 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 AMELXQ99217 191 aa14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 BEX4Q9NWD9 120 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-225ENST00000600733 J3QLI3 93 aa14.88□□□□□ -0.03
SHKBP1-225ENST00000600733 TSPAN13O95857 204 aa14.88□□□□□ -0.03
SHKBP1-225ENST00000600733 IGHV3-73A0A0B4J1V6 119 aa14.87□□□□□ -0.03
SHKBP1-225ENST00000600733 J3QQQ9 107 aa14.87□□□□□ -0.03
SHKBP1-225ENST00000600733 PRM2P04554 102 aa14.87□□□□□ -0.03
SHKBP1-225ENST00000600733 C20orf203Q8NBC4 194 aa14.87□□□□□ -0.03
SHKBP1-225ENST00000600733 TEX15Q9BXT5 2789 aa14.87□□□□□ -0.03
SHKBP1-225ENST00000600733 I3L3M4 83 aa14.87□□□□□ -0.03
SHKBP1-225ENST00000600733 SLURP1P55000 103 aa14.87□□□□□ -0.03
SHKBP1-225ENST00000600733 TRGV11A0A075B6L2 103 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 PTPN13Q12923 2485 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 Q6YL49 198 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 NFE4Q86UQ8 179 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 LOC107984156A0A0G2JMH3 177 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 IGHV3-30P01768 117 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 IGHV3-30-5P0DP03 117 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 ARL17AQ8IVW1 177 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 SLC25A29Q8N8R3 303 aa14.86□□□□□ -0.03
SHKBP1-225ENST00000600733 MYO9AB2RTY4 2548 aa14.85□□□□□ -0.03
SHKBP1-225ENST00000600733 IGHV3-64A0A075B6Q5 118 aa14.85□□□□□ -0.03
SHKBP1-225ENST00000600733 PROK1P58294 105 aa14.85□□□□□ -0.03
SHKBP1-225ENST00000600733 DEFB131AP59861 70 aa14.85□□□□□ -0.03
SHKBP1-225ENST00000600733 NDUFA11Q86Y39 141 aa14.85□□□□□ -0.03
SHKBP1-225ENST00000600733 LGALS3P17931 250 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-225ENST00000600733 ZNF462Q96JM2 2506 aa14.84□□□□□ -0.03
SHKBP1-225ENST00000600733 ABCA12Q86UK0 2595 aa14.84□□□□□ -0.03
SHKBP1-225ENST00000600733 SPAG8Q99932 426 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-225ENST00000600733 INSL3P51460 131 aa14.83□□□□□ -0.03
SHKBP1-225ENST00000600733 RNF152Q8N8N0 203 aa14.83□□□□□ -0.03
SHKBP1-225ENST00000600733 TSSC4Q9Y5U2 329 aaPredicted RBP14.83□□□□□ -0.03
SHKBP1-225ENST00000600733 IGLV4-3A0A075B6K6 122 aa14.83□□□□□ -0.04
SHKBP1-225ENST00000600733 TMEM223A0PJW6 202 aa14.83□□□□□ -0.04
SHKBP1-225ENST00000600733 FSHBP01225 129 aa14.83□□□□□ -0.04
SHKBP1-225ENST00000600733 DLX4Q92988 240 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-225ENST00000600733 A0A0J9YXV3 536 aa14.82□□□□□ -0.04
SHKBP1-225ENST00000600733 CFC1BP0CG36 223 aa14.82□□□□□ -0.04
SHKBP1-225ENST00000600733 CFC1P0CG37 223 aa14.82□□□□□ -0.04
SHKBP1-225ENST00000600733 PSMB2P49721 201 aa14.82□□□□□ -0.04
SHKBP1-225ENST00000600733 DUX3Q96PT4 197 aa14.82□□□□□ -0.04
SHKBP1-225ENST00000600733 CR1P17927 2039 aa14.82□□□□□ -0.04
SHKBP1-225ENST00000600733 ZNF22P17026 224 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-225ENST00000600733 RBMY1BA6NDE4 496 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 RBMY1EA6NEQ0 496 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 PRB1P04280 392 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 RBMY1DP0C7P1 496 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 IGHV4-31P0DP07 118 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 VCX2Q9H322 139 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 Q9UF83 564 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 NACAE9PAV3 2078 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 RHODO00212 210 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 SMCPP49901 116 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 UBE2D3P61077 147 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 UBE2D2P62837 147 aa14.81□□□□□ -0.04
SHKBP1-225ENST00000600733 J3QR89 54 aa14.8□□□□□ -0.04
SHKBP1-225ENST00000600733 LEPROTO15243 131 aa14.8□□□□□ -0.04
SHKBP1-225ENST00000600733 CFAP126Q5VTH2 177 aa14.8□□□□□ -0.04
SHKBP1-225ENST00000600733 HIST2H2BDQ6DRA6 164 aa14.8□□□□□ -0.04
SHKBP1-225ENST00000600733 NAV2Q8IVL1 2488 aa14.8□□□□□ -0.04
SHKBP1-225ENST00000600733 H3BMM0 161 aa14.8□□□□□ -0.04
SHKBP1-225ENST00000600733 GTSF1LQ9H1H1 148 aa14.8□□□□□ -0.04
SHKBP1-225ENST00000600733 CEMP1Q6PRD7 247 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-225ENST00000600733 GAGE12HA6NDE8 117 aa14.78□□□□□ -0.04
SHKBP1-225ENST00000600733 TMEM61Q8N0U2 210 aa14.78□□□□□ -0.04
SHKBP1-225ENST00000600733 FAM104AQ969W3 186 aa14.78□□□□□ -0.04
SHKBP1-225ENST00000600733 TMEM238C9JI98 176 aa14.78□□□□□ -0.04
SHKBP1-225ENST00000600733 ZNF418Q8TF45 676 aaPredicted RBP14.77□□□□□ -0.04
SHKBP1-225ENST00000600733 TLN2Q9Y4G6 2542 aa14.77□□□□□ -0.05
SHKBP1-225ENST00000600733 CD28P10747 220 aa14.77□□□□□ -0.05
SHKBP1-225ENST00000600733 KRTAP10-9P60411 292 aa14.77□□□□□ -0.05
SHKBP1-225ENST00000600733 RNASE13Q5GAN3 156 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-225ENST00000600733 C10orf126Q8N4M7 172 aa14.77□□□□□ -0.05
SHKBP1-225ENST00000600733 CUBNO60494 3623 aa14.76□□□□□ -0.05
SHKBP1-225ENST00000600733 AZU1P20160 251 aa14.76□□□□□ -0.05
SHKBP1-225ENST00000600733 Q6ZSN1 163 aa14.76□□□□□ -0.05
SHKBP1-225ENST00000600733 ZNF469Q96JG9 3925 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-225ENST00000600733 USP24Q9UPU5 2620 aa14.76□□□□□ -0.05
SHKBP1-225ENST00000600733 KHDC1LQ5JSQ8 128 aa14.76□□□□□ -0.05
SHKBP1-225ENST00000600733 TRAV2A0A0B4J234 112 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 A4D1N5 150 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 A8MTW9 85 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 TCL1BO95988 128 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 SPXQ9BT56 116 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 EDA2RQ9HAV5 297 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 PRO1854Q9UHT4 67 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 TNFRSF18Q9Y5U5 241 aa14.75□□□□□ -0.05
SHKBP1-225ENST00000600733 M0R2P5 195 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms