RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 COMMD7Q86VX2 200 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 WFDC10BQ8IUB3 73 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
SNRPA-208ENST00000600456 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
SNRPA-208ENST00000600456 IGHV3-38A0A0C4DH36 116 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 LINC00862A6NCI5 91 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 RIGQ13278 110 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 C1orf134Q5TEV5 83 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 RASL11AQ6T310 242 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
SNRPA-208ENST00000600456 FRZBQ92765 325 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
SNRPA-208ENST00000600456 TNFRSF18Q9Y5U5 241 aa9.42□□□□□ -0.9
SNRPA-208ENST00000600456 MT-ND4LP03901 98 aa9.41□□□□□ -0.9
SNRPA-208ENST00000600456 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
SNRPA-208ENST00000600456 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
SNRPA-208ENST00000600456 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
SNRPA-208ENST00000600456 KRTAP1-5Q9BYS1 174 aa9.41□□□□□ -0.9
SNRPA-208ENST00000600456 TMEM191AQ9H0A3 160 aa9.41□□□□□ -0.9
SNRPA-208ENST00000600456 DNAH10Q8IVF4 4471 aa9.41□□□□□ -0.9
SNRPA-208ENST00000600456 A0A1B0GW15 77 aa9.4□□□□□ -0.9
SNRPA-208ENST00000600456 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.9
SNRPA-208ENST00000600456 ANAPC16Q96DE5 110 aa9.4□□□□□ -0.9
SNRPA-208ENST00000600456 NIT2Q9NQR4 276 aa9.4□□□□□ -0.9
SNRPA-208ENST00000600456 F8W036 122 aa9.39□□□□□ -0.91
SNRPA-208ENST00000600456 RTL8CO15255 209 aa9.39□□□□□ -0.91
SNRPA-208ENST00000600456 ADCYAP1P18509 176 aa9.39□□□□□ -0.91
SNRPA-208ENST00000600456 SEC11CQ9BY50 192 aa9.39□□□□□ -0.91
SNRPA-208ENST00000600456 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
SNRPA-208ENST00000600456 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
SNRPA-208ENST00000600456 S100A8P05109 93 aa9.38□□□□□ -0.91
SNRPA-208ENST00000600456 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
SNRPA-208ENST00000600456 MRAP2Q96G30 205 aa9.37□□□□□ -0.91
SNRPA-208ENST00000600456 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
SNRPA-208ENST00000600456 PKIAP61925 76 aa9.36□□□□□ -0.91
SNRPA-208ENST00000600456 KCNIP4Q6PIL6 250 aa9.36□□□□□ -0.91
SNRPA-208ENST00000600456 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
SNRPA-208ENST00000600456 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
SNRPA-208ENST00000600456 TRBV6-5A0A0K0K1A5 114 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 PRSS29PA6NIE9 313 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 RAB4AP20338 218 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 HBBP68871 147 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 C10orf91Q5T1B1 145 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 NIT1Q86X76 327 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 RNF185Q96GF1 192 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 URGCP-MRPS24S4R325 110 aa9.35□□□□□ -0.91
SNRPA-208ENST00000600456 TRBV25-1A0A075B6N4 114 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 A0A1B0GXF2 115 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 IBA57-AS1B1ANH7 110 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 CAMPP49913 170 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 LAGE3Q14657 143 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 IQCJQ1A5X6 159 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 CTDSP1Q9GZU7 261 aa9.34□□□□□ -0.91
SNRPA-208ENST00000600456 DNAH17Q9UFH2 4485 aa9.33□□□□□ -0.92
SNRPA-208ENST00000600456 A0A087WX48 190 aa9.33□□□□□ -0.92
SNRPA-208ENST00000600456 IGHV1-24A0A0C4DH33 117 aa9.33□□□□□ -0.92
SNRPA-208ENST00000600456 PPP1R17O96001 155 aa9.33□□□□□ -0.92
SNRPA-208ENST00000600456 FAM104BQ5XKR9 115 aa9.33□□□□□ -0.92
SNRPA-208ENST00000600456 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
SNRPA-208ENST00000600456 NTM-AS1Q6ZSK4 140 aa9.33□□□□□ -0.92
SNRPA-208ENST00000600456 RPL39LQ96EH5 51 aaKnown RBP9.33□□□□□ -0.92
SNRPA-208ENST00000600456 CARHSP1Q9Y2V2 147 aaKnown RBP9.33□□□□□ -0.92
SNRPA-208ENST00000600456 COTL1Q14019 142 aa9.32□□□□□ -0.92
SNRPA-208ENST00000600456 ELOBQ15370 118 aa9.32□□□□□ -0.92
SNRPA-208ENST00000600456 BTF3L4Q96K17 158 aa9.32□□□□□ -0.92
SNRPA-208ENST00000600456 CHCHD5Q9BSY4 110 aa9.32□□□□□ -0.92
SNRPA-208ENST00000600456 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
SNRPA-208ENST00000600456 NCR2O95944 276 aa9.31□□□□□ -0.92
SNRPA-208ENST00000600456 Q6ZRN7 208 aaPredicted RBP9.31□□□□□ -0.92
SNRPA-208ENST00000600456 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
SNRPA-208ENST00000600456 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
SNRPA-208ENST00000600456 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
SNRPA-208ENST00000600456 RHEBQ15382 184 aa9.3□□□□□ -0.92
SNRPA-208ENST00000600456 Q8N3U1 123 aa9.3□□□□□ -0.92
SNRPA-208ENST00000600456 TMEM243Q9BU79 118 aa9.3□□□□□ -0.92
SNRPA-208ENST00000600456 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
SNRPA-208ENST00000600456 FAT2Q9NYQ8 4349 aa9.3□□□□□ -0.92
SNRPA-208ENST00000600456 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
SNRPA-208ENST00000600456 TRAV9-1A0A075B6T8 112 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 TRAV8-3A0A0A6YYJ7 113 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 A0A1B0GVY2 172 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 I3L3M4 83 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 GAS8-AS1O95177 125 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 PPBPP02775 128 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 RPS10P46783 165 aaKnown RBP9.29□□□□□ -0.92
SNRPA-208ENST00000600456 AMTP48728 403 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 TNP2Q05952 138 aa9.29□□□□□ -0.92
SNRPA-208ENST00000600456 MRPL51Q4U2R6 128 aaKnown RBP9.29□□□□□ -0.92
SNRPA-208ENST00000600456 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
SNRPA-208ENST00000600456 TMEM70Q9BUB7 260 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms