RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
VRK3-219ENST00000600137 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
VRK3-219ENST00000600137 CARHSP1Q9Y2V2 147 aaKnown RBP9.37□□□□□ -0.91
VRK3-219ENST00000600137 NBDYA0A0U1RRE5 68 aa9.36□□□□□ -0.91
VRK3-219ENST00000600137 A0A1B0GXF2 115 aa9.36□□□□□ -0.91
VRK3-219ENST00000600137 GAS8-AS1O95177 125 aa9.36□□□□□ -0.91
VRK3-219ENST00000600137 MT-ND4LP03901 98 aa9.36□□□□□ -0.91
VRK3-219ENST00000600137 RPL36AP83881 106 aaKnown RBP9.36□□□□□ -0.91
VRK3-219ENST00000600137 WFDC10BQ8IUB3 73 aa9.36□□□□□ -0.91
VRK3-219ENST00000600137 RPL36ALQ969Q0 106 aaKnown RBP9.36□□□□□ -0.91
VRK3-219ENST00000600137 DNAH11Q96DT5 4516 aa9.35□□□□□ -0.91
VRK3-219ENST00000600137 TRAV26-2A0A0B4J265 109 aa9.35□□□□□ -0.91
VRK3-219ENST00000600137 RAB4AP20338 218 aa9.35□□□□□ -0.91
VRK3-219ENST00000600137 RIGQ13278 110 aa9.35□□□□□ -0.91
VRK3-219ENST00000600137 LELP1Q5T871 98 aa9.35□□□□□ -0.91
VRK3-219ENST00000600137 RASL11AQ6T310 242 aa9.35□□□□□ -0.91
VRK3-219ENST00000600137 SIVA1O15304 175 aa9.34□□□□□ -0.91
VRK3-219ENST00000600137 NTM-AS1Q6ZSK4 140 aa9.34□□□□□ -0.91
VRK3-219ENST00000600137 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
VRK3-219ENST00000600137 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
VRK3-219ENST00000600137 NIT2Q9NQR4 276 aa9.34□□□□□ -0.91
VRK3-219ENST00000600137 EPPK1P58107 5090 aaKnown RBP9.33□□□□□ -0.92
VRK3-219ENST00000600137 DNAH10OSP0CZ25 163 aa9.33□□□□□ -0.92
VRK3-219ENST00000600137 AMN1Q8IY45 258 aa9.33□□□□□ -0.92
VRK3-219ENST00000600137 FRZBQ92765 325 aa9.33□□□□□ -0.92
VRK3-219ENST00000600137 RPL39LQ96EH5 51 aaKnown RBP9.33□□□□□ -0.92
VRK3-219ENST00000600137 PKD1P98161 4303 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 IGHV3-38A0A0C4DH36 116 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 H7C1H1 209 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 RTL8CO15255 209 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 FAM104BQ5XKR9 115 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 MRPL54Q6P161 138 aaKnown RBP9.32□□□□□ -0.92
VRK3-219ENST00000600137 SMIM15Q7Z3B0 74 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 CLRN3Q8NCR9 226 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
VRK3-219ENST00000600137 A0A1B0GW15 77 aa9.31□□□□□ -0.92
VRK3-219ENST00000600137 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
VRK3-219ENST00000600137 CAMPP49913 170 aa9.31□□□□□ -0.92
VRK3-219ENST00000600137 SLC7A5P1Q8MH63 180 aa9.31□□□□□ -0.92
VRK3-219ENST00000600137 Q8N3U1 123 aa9.31□□□□□ -0.92
VRK3-219ENST00000600137 IMMP2LQ96T52 175 aa9.31□□□□□ -0.92
VRK3-219ENST00000600137 A0A087WWC5 75 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 TRBV6-8A0A0A6YYG3 113 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 RPS10P46783 165 aaKnown RBP9.3□□□□□ -0.92
VRK3-219ENST00000600137 HBBP68871 147 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 MRPL51Q4U2R6 128 aaKnown RBP9.3□□□□□ -0.92
VRK3-219ENST00000600137 LINC01556Q5JQF7 62 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 OR10J3Q5JRS4 329 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 ATP5L2Q7Z4Y8 100 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 DAZ4Q86SG3 579 aaKnown RBP9.3□□□□□ -0.92
VRK3-219ENST00000600137 DAZ3Q9NR90 486 aaKnown RBP9.3□□□□□ -0.92
VRK3-219ENST00000600137 TMEM242Q9NWH2 141 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 TNFRSF18Q9Y5U5 241 aa9.3□□□□□ -0.92
VRK3-219ENST00000600137 TRAV8-6A0A0B4J262 113 aa9.29□□□□□ -0.92
VRK3-219ENST00000600137 SMKR1H3BMG3 65 aa9.29□□□□□ -0.92
VRK3-219ENST00000600137 NRACQ8N912 160 aa9.29□□□□□ -0.92
VRK3-219ENST00000600137 POLR2KP53803 58 aaKnown RBP9.28□□□□□ -0.92
VRK3-219ENST00000600137 NIT1Q86X76 327 aa9.28□□□□□ -0.92
VRK3-219ENST00000600137 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
VRK3-219ENST00000600137 NCR2O95944 276 aa9.27□□□□□ -0.93
VRK3-219ENST00000600137 APOC3P02656 99 aa9.27□□□□□ -0.93
VRK3-219ENST00000600137 RHEBQ15382 184 aa9.27□□□□□ -0.93
VRK3-219ENST00000600137 TTC32Q5I0X7 151 aa9.27□□□□□ -0.93
VRK3-219ENST00000600137 Q6ZRN7 208 aaPredicted RBP9.27□□□□□ -0.93
VRK3-219ENST00000600137 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
VRK3-219ENST00000600137 BTF3L4Q96K17 158 aa9.27□□□□□ -0.93
VRK3-219ENST00000600137 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
VRK3-219ENST00000600137 K7EP13 123 aa9.26□□□□□ -0.93
VRK3-219ENST00000600137 IQCJQ1A5X6 159 aa9.26□□□□□ -0.93
VRK3-219ENST00000600137 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
VRK3-219ENST00000600137 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
VRK3-219ENST00000600137 TRBV24-1A0A075B6N3 115 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 IGHV3-30P01768 117 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 IGHV3-33P01772 117 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 S100A8P05109 93 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 IGHV3-30-3P0DP02 117 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 IGHV3-30-5P0DP03 117 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 BTF3P20290 206 aaKnown RBP9.25□□□□□ -0.93
VRK3-219ENST00000600137 TMEM97Q5BJF2 176 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 ATRAIDQ6UW56 229 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 TMEM70Q9BUB7 260 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 RPS10P5Q9NQ39 176 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 HECTD4Q9Y4D8 3996 aa9.25□□□□□ -0.93
VRK3-219ENST00000600137 TRAV9-1A0A075B6T8 112 aa9.24□□□□□ -0.93
VRK3-219ENST00000600137 TMEM136Q6ZRR5 245 aa9.24□□□□□ -0.93
VRK3-219ENST00000600137 TRAV9-2A0A087WT02 112 aa9.23□□□□□ -0.93
VRK3-219ENST00000600137 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
VRK3-219ENST00000600137 SVBPQ8N300 66 aa9.23□□□□□ -0.93
VRK3-219ENST00000600137 ST20Q9HBF5 79 aa9.23□□□□□ -0.93
VRK3-219ENST00000600137 URGCP-MRPS24S4R325 110 aa9.23□□□□□ -0.93
VRK3-219ENST00000600137 DYNC1H1Q14204 4646 aaKnown RBP9.22□□□□□ -0.93
VRK3-219ENST00000600137 TRBV25-1A0A075B6N4 114 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 IGHV1-24A0A0C4DH33 117 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 D6R8Y8 96 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 SNAPINO95295 136 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 TSHBP01222 138 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 CKS2P33552 79 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms