RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 GAGE12BA1L429 117 aa11.11□□□□□ -0.63
VRK3-218ENST00000600031 GNRH2O43555 120 aa11.11□□□□□ -0.63
VRK3-218ENST00000600031 RBMY1A1P0DJD3 496 aaKnown RBP11.11□□□□□ -0.63
VRK3-218ENST00000600031 RBMY1CP0DJD4 496 aa11.11□□□□□ -0.63
VRK3-218ENST00000600031 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
VRK3-218ENST00000600031 RBMY1FQ15415 496 aaKnown RBP11.11□□□□□ -0.63
VRK3-218ENST00000600031 TCTAP57738 103 aa11.11□□□□□ -0.63
VRK3-218ENST00000600031 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
VRK3-218ENST00000600031 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
VRK3-218ENST00000600031 UFSP1Q6NVU6 142 aa11.09□□□□□ -0.63
VRK3-218ENST00000600031 H3BVH4 76 aa11.09□□□□□ -0.63
VRK3-218ENST00000600031 H3BUT2 72 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 WIPF1O43516 503 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 K7EP34 96 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 SPRY2O43597 315 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 ASIPP42127 132 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 GTSCR1Q86UQ5 136 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
VRK3-218ENST00000600031 IGHV1OR15-1A0A075B7D0 117 aa11.07□□□□□ -0.64
VRK3-218ENST00000600031 RNASE3P12724 160 aaKnown RBP11.07□□□□□ -0.64
VRK3-218ENST00000600031 RPL35AP18077 110 aaKnown RBP11.07□□□□□ -0.64
VRK3-218ENST00000600031 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
VRK3-218ENST00000600031 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
VRK3-218ENST00000600031 A0A087WX48 190 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 TRAV26-2A0A0B4J265 109 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 K7ERU9 68 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 MED14OSP0DP75 135 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 ANK2Q01484 3957 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 K7EMI3 77 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 OXLD1Q5BKU9 147 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 Q8N1Y9 231 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 CHAC1Q9BUX1 264 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 SMIM2Q9BVW6 85 aa11.06□□□□□ -0.64
VRK3-218ENST00000600031 PRM2P04554 102 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 GIG44P09565 113 aaPredicted RBP11.05□□□□□ -0.64
VRK3-218ENST00000600031 PLNP26678 52 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 OR5A1Q8NGJ0 315 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
VRK3-218ENST00000600031 TRAV12-1A0A0B4J245 112 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 IGHV3-16A0A0C4DH30 117 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 A0A1W2PPM0 123 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
VRK3-218ENST00000600031 INSP01308 110 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 RAB37Q96AX2 223 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 MDFICQ9P1T7 246 aa11.05□□□□□ -0.64
VRK3-218ENST00000600031 TRBV25-1A0A075B6N4 114 aa11.04□□□□□ -0.64
VRK3-218ENST00000600031 HTN1P15515 57 aa11.04□□□□□ -0.64
VRK3-218ENST00000600031 GCSHP23434 173 aa11.04□□□□□ -0.64
VRK3-218ENST00000600031 TAL2Q16559 108 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 C1orf158Q8N1D5 194 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 MDFIQ99750 246 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 MUC4Q99102 2169 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 PKD1L1Q8TDX9 2849 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 M0R381 172 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 SUMO2P61956 95 aaKnown RBP11.03□□□□□ -0.64
VRK3-218ENST00000600031 C21orf62-AS1Q17RA5 79 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 LINC01587Q99440 93 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 VPS25Q9BRG1 176 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 TM2D2Q9BX73 214 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 PHLDA3Q9Y5J5 127 aa11.03□□□□□ -0.64
VRK3-218ENST00000600031 H7C1H1 209 aa11.02□□□□□ -0.64
VRK3-218ENST00000600031 PPP1R17O96001 155 aa11.02□□□□□ -0.64
VRK3-218ENST00000600031 FABP2P12104 132 aa11.02□□□□□ -0.64
VRK3-218ENST00000600031 SPCS1Q9Y6A9 102 aa11.02□□□□□ -0.64
VRK3-218ENST00000600031 F8VRH5 84 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 FXYD2P54710 66 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 SAMD5Q5TGI4 173 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 CEND1Q8N111 149 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 SVIPQ8NHG7 77 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 C9orf85Q96MD7 179 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 TTTY13Q9BZ97 58 aa11.02□□□□□ -0.65
VRK3-218ENST00000600031 RASL10AQ92737 203 aa11.01□□□□□ -0.65
VRK3-218ENST00000600031 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
VRK3-218ENST00000600031 IGHV3OR16-12A0A075B7B8 117 aa11□□□□□ -0.65
VRK3-218ENST00000600031 MORN3Q6PF18 240 aaPredicted RBP11□□□□□ -0.65
VRK3-218ENST00000600031 SCGB3A1Q96QR1 104 aa11□□□□□ -0.65
VRK3-218ENST00000600031 NAA38Q9BRA0 125 aaKnown RBP11□□□□□ -0.65
VRK3-218ENST00000600031 KRTAP10-11P60412 298 aa11□□□□□ -0.65
VRK3-218ENST00000600031 LINC00467Q9BRT7 94 aa11□□□□□ -0.65
VRK3-218ENST00000600031 CSNK1G2-AS1Q8NCQ2 148 aa10.99□□□□□ -0.65
VRK3-218ENST00000600031 NXPH4O95158 308 aa10.99□□□□□ -0.65
VRK3-218ENST00000600031 C14orf178Q8N769 122 aaPredicted RBP10.99□□□□□ -0.65
VRK3-218ENST00000600031 MAPKAPK5-AS1Q8N8E1 139 aa10.99□□□□□ -0.65
VRK3-218ENST00000600031 CSTL1Q9H114 145 aa10.99□□□□□ -0.65
VRK3-218ENST00000600031 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
VRK3-218ENST00000600031 AZU1P20160 251 aa10.98□□□□□ -0.65
VRK3-218ENST00000600031 POM121L12Q8N7R1 296 aa10.98□□□□□ -0.65
VRK3-218ENST00000600031 NEXN-AS1Q8NBZ9 246 aa10.98□□□□□ -0.65
VRK3-218ENST00000600031 PHLDA1Q8WV24 401 aaPredicted RBP10.98□□□□□ -0.65
VRK3-218ENST00000600031 C1QTNF4Q9BXJ3 329 aa10.98□□□□□ -0.65
VRK3-218ENST00000600031 NEGR1Q7Z3B1 354 aa10.97□□□□□ -0.65
VRK3-218ENST00000600031 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
VRK3-218ENST00000600031 MGPP08493 103 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms