RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
IRF3-225ENST00000600022 TP53TG3Q9ULZ0 132 aa9.59□□□□□ -0.87
IRF3-225ENST00000600022 LAMTOR2Q9Y2Q5 125 aa9.59□□□□□ -0.87
IRF3-225ENST00000600022 D6R8Y8 96 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 PPP1R17O96001 155 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 AZU1P20160 251 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 RAB4AP20338 218 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 EVI2AP22794 236 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 AKR1D1P51857 326 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 DAD1P61803 113 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
IRF3-225ENST00000600022 C18orf32Q8TCD1 76 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 TMEM18Q96B42 140 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 MRAP2Q96G30 205 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 MDFICQ9P1T7 246 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
IRF3-225ENST00000600022 M0R2P5 195 aa9.57□□□□□ -0.88
IRF3-225ENST00000600022 MGPP08493 103 aa9.57□□□□□ -0.88
IRF3-225ENST00000600022 ZNF876PQ49A33 203 aa9.57□□□□□ -0.88
IRF3-225ENST00000600022 PIK3CD-AS1Q5SR53 167 aa9.57□□□□□ -0.88
IRF3-225ENST00000600022 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
IRF3-225ENST00000600022 SAMD10Q9BYL1 202 aa9.57□□□□□ -0.88
IRF3-225ENST00000600022 PLAC8L1A1L4L8 177 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 C16orf90A8MZG2 172 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 HSBP1O75506 76 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 SERF1AO75920 110 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 DEFB130BP0DP73 79 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 DEFB130AP0DP74 79 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 PDZD11Q5EBL8 140 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 RNASEKQ6P5S7 137 aaKnown RBP9.56□□□□□ -0.88
IRF3-225ENST00000600022 C14orf178Q8N769 122 aaPredicted RBP9.56□□□□□ -0.88
IRF3-225ENST00000600022 ZNRF2Q8NHG8 242 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 PRSS3P2Q8NHM4 247 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
IRF3-225ENST00000600022 PTH2Q96A98 100 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 C16orf74Q96GX8 76 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 MAP1LC3AQ9H492 121 aa9.56□□□□□ -0.88
IRF3-225ENST00000600022 HERC1Q15751 4861 aa9.55□□□□□ -0.88
IRF3-225ENST00000600022 A8MWV9 139 aa9.55□□□□□ -0.88
IRF3-225ENST00000600022 FA2HQ7L5A8 372 aa9.55□□□□□ -0.88
IRF3-225ENST00000600022 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
IRF3-225ENST00000600022 C11orf72Q8NBR9 251 aa9.55□□□□□ -0.88
IRF3-225ENST00000600022 RNASE8Q8TDE3 154 aaKnown RBP9.55□□□□□ -0.88
IRF3-225ENST00000600022 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
IRF3-225ENST00000600022 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
IRF3-225ENST00000600022 GSN-AS1Q9NRJ2 163 aa9.55□□□□□ -0.88
IRF3-225ENST00000600022 NBDYA0A0U1RRE5 68 aa9.54□□□□□ -0.88
IRF3-225ENST00000600022 F5H697 171 aa9.54□□□□□ -0.88
IRF3-225ENST00000600022 ESDP10768 282 aa9.54□□□□□ -0.88
IRF3-225ENST00000600022 FABP4P15090 132 aa9.54□□□□□ -0.88
IRF3-225ENST00000600022 IQCJQ1A5X6 159 aa9.54□□□□□ -0.88
IRF3-225ENST00000600022 TEX48A0A1B0GUV7 120 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 F5H768 121 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 NCR2O95944 276 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 NUDT3O95989 172 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 LINC00614P0C842 121 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 PMCHP20382 165 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 NIT1Q86X76 327 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 LINC00588Q9Y4M8 146 aa9.53□□□□□ -0.88
IRF3-225ENST00000600022 SMKR1H3BMG3 65 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 H7C1H1 209 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 RHODO00212 210 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 CDK2AP2O75956 126 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 TNFRSF6BO95407 300 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 AMTP48728 403 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 ZNF56Q15929 161 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 C6orf223Q8N319 242 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 PACRGQ96M98 296 aaPredicted RBP9.52□□□□□ -0.89
IRF3-225ENST00000600022 KRTAP1-5Q9BYS1 174 aa9.52□□□□□ -0.89
IRF3-225ENST00000600022 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
IRF3-225ENST00000600022 A0A087WWL8 130 aa9.51□□□□□ -0.89
IRF3-225ENST00000600022 LOC389332A0A1B0GUA5 103 aa9.51□□□□□ -0.89
IRF3-225ENST00000600022 C15orf53Q8NAA6 179 aa9.51□□□□□ -0.89
IRF3-225ENST00000600022 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
IRF3-225ENST00000600022 AP5S1Q9NUS5 200 aa9.51□□□□□ -0.89
IRF3-225ENST00000600022 TRGV1A0A0A0MS02 117 aa9.5□□□□□ -0.89
IRF3-225ENST00000600022 LYRM9A8MSI8 78 aa9.5□□□□□ -0.89
IRF3-225ENST00000600022 NPYP01303 97 aa9.5□□□□□ -0.89
IRF3-225ENST00000600022 OR10D4PQ8NGN7 298 aa9.5□□□□□ -0.89
IRF3-225ENST00000600022 C20orf78Q9BR46 151 aa9.5□□□□□ -0.89
IRF3-225ENST00000600022 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
IRF3-225ENST00000600022 KRTAP10-2P60368 255 aa9.49□□□□□ -0.89
IRF3-225ENST00000600022 DAZ2Q13117 558 aaKnown RBP9.49□□□□□ -0.89
IRF3-225ENST00000600022 SPATA12Q7Z6I5 190 aa9.49□□□□□ -0.89
IRF3-225ENST00000600022 RASL10AQ92737 203 aa9.49□□□□□ -0.89
IRF3-225ENST00000600022 MRPL16Q9NX20 251 aaKnown RBP9.49□□□□□ -0.89
IRF3-225ENST00000600022 KIF25-AS1Q9Y6Z4 181 aa9.49□□□□□ -0.89
IRF3-225ENST00000600022 IFI27P40305 119 aaPredicted RBP9.48□□□□□ -0.89
IRF3-225ENST00000600022 SUMO4Q6EEV6 95 aa9.48□□□□□ -0.89
IRF3-225ENST00000600022 JPT2Q9H910 190 aa9.48□□□□□ -0.89
IRF3-225ENST00000600022 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
IRF3-225ENST00000600022 NUPR1O60356 82 aa9.47□□□□□ -0.89
IRF3-225ENST00000600022 CIDEAO60543 219 aa9.47□□□□□ -0.89
IRF3-225ENST00000600022 ATP5G1P05496 136 aa9.47□□□□□ -0.89
IRF3-225ENST00000600022 CRYGDP07320 174 aa9.47□□□□□ -0.89
IRF3-225ENST00000600022 LINC00310P59036 64 aa9.47□□□□□ -0.89
IRF3-225ENST00000600022 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
IRF3-225ENST00000600022 ZFP2Q6ZN57 461 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms