RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 VSIG2Q96IQ7 327 aa8.85□□□□□ -0.99
SH2D3A-208ENST00000599563 BTF3L4Q96K17 158 aa8.85□□□□□ -0.99
SH2D3A-208ENST00000599563 DPH3P1Q9H4G8 78 aa8.85□□□□□ -0.99
SH2D3A-208ENST00000599563 Q9H8V8 135 aa8.85□□□□□ -0.99
SH2D3A-208ENST00000599563 DNAH2Q9P225 4427 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 A0A096LPF7 62 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 RHODO00212 210 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 GAS8-AS1O95177 125 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 S100PP25815 95 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 CRYBA4P53673 196 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 HBBP68871 147 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 MRPL23Q16540 153 aaKnown RBP8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 ESRGQ1W209 222 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 SUMO4Q6EEV6 95 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 ZFP2Q6ZN57 461 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 ATP5L2Q7Z4Y8 100 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 TMEM191AQ9H0A3 160 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 HHLA3Q9XRX5 114 aa8.84□□□□□ -0.99
SH2D3A-208ENST00000599563 TRAV9-1A0A075B6T8 112 aa8.83□□□□□ -1
SH2D3A-208ENST00000599563 TRAV26-2A0A0B4J265 109 aa8.83□□□□□ -1
SH2D3A-208ENST00000599563 SMIM17P0DL12 118 aa8.83□□□□□ -1
SH2D3A-208ENST00000599563 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
SH2D3A-208ENST00000599563 F5H697 171 aa8.82□□□□□ -1
SH2D3A-208ENST00000599563 SMKR1H3BMG3 65 aa8.82□□□□□ -1
SH2D3A-208ENST00000599563 K7EQD1 137 aa8.82□□□□□ -1
SH2D3A-208ENST00000599563 RAB4AP20338 218 aa8.82□□□□□ -1
SH2D3A-208ENST00000599563 S100A1P23297 94 aa8.82□□□□□ -1
SH2D3A-208ENST00000599563 TMEM136Q6ZRR5 245 aa8.82□□□□□ -1
SH2D3A-208ENST00000599563 A0A1B0GW15 77 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 CIDEAO60543 219 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 NCR2O95944 276 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 RAB4BP61018 213 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 MRPL51Q4U2R6 128 aaKnown RBP8.81□□□□□ -1
SH2D3A-208ENST00000599563 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 SMIM15Q7Z3B0 74 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 SMCO4Q9NRQ5 59 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 FAT2Q9NYQ8 4349 aa8.81□□□□□ -1
SH2D3A-208ENST00000599563 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
SH2D3A-208ENST00000599563 SIVA1O15304 175 aa8.8□□□□□ -1
SH2D3A-208ENST00000599563 GYPEP15421 78 aa8.8□□□□□ -1
SH2D3A-208ENST00000599563 RHOHQ15669 191 aa8.8□□□□□ -1
SH2D3A-208ENST00000599563 SH2D6Q7Z4S9 175 aa8.8□□□□□ -1
SH2D3A-208ENST00000599563 NEXN-AS1Q8NBZ9 246 aa8.8□□□□□ -1
SH2D3A-208ENST00000599563 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
SH2D3A-208ENST00000599563 TRBV24-1A0A075B6N3 115 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 GAGE12JA6NER3 117 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 K7EP13 123 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 M0QY20 66 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 S100A8P05109 93 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 LINC00694P0DN24 101 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 SRIP30626 198 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 RPS10P46783 165 aaKnown RBP8.79□□□□□ -1
SH2D3A-208ENST00000599563 GAGE1Q13065 139 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 GAGE4Q13068 117 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 GAGE5Q13069 117 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 GAGE13Q4V321 117 aa8.79□□□□□ -1
SH2D3A-208ENST00000599563 PKD1P98161 4303 aa8.78□□□□□ -1
SH2D3A-208ENST00000599563 RASL11AQ6T310 242 aa8.78□□□□□ -1
SH2D3A-208ENST00000599563 TRAV9-2A0A087WT02 112 aa8.77□□□□□ -1.01
SH2D3A-208ENST00000599563 KIAA1644Q3SXP7 199 aa8.77□□□□□ -1.01
SH2D3A-208ENST00000599563 LYPD5Q6UWN5 251 aa8.77□□□□□ -1.01
SH2D3A-208ENST00000599563 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
SH2D3A-208ENST00000599563 COLCA2A8K830 154 aa8.76□□□□□ -1.01
SH2D3A-208ENST00000599563 D6R8Y8 96 aa8.76□□□□□ -1.01
SH2D3A-208ENST00000599563 TNP2Q05952 138 aa8.76□□□□□ -1.01
SH2D3A-208ENST00000599563 NRACQ8N912 160 aa8.76□□□□□ -1.01
SH2D3A-208ENST00000599563 GNB1LQ9BYB4 327 aa8.76□□□□□ -1.01
SH2D3A-208ENST00000599563 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 TRBV10-1A0A0K0K1A3 114 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 NPYP01303 97 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 HLA-DQA1P01909 254 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 UBE2D3P61077 147 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 UBE2D2P62837 147 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 OR10J3Q5JRS4 329 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 NFE4Q86UQ8 179 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 DEFB104AQ8WTQ1 72 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 MRAP2Q96G30 205 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 KRTAP1-5Q9BYS1 174 aa8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
SH2D3A-208ENST00000599563 PKHD1P08F94 4074 aa8.74□□□□□ -1.01
SH2D3A-208ENST00000599563 H7C1H1 209 aa8.74□□□□□ -1.01
SH2D3A-208ENST00000599563 TIRAPP58753 221 aa8.74□□□□□ -1.01
SH2D3A-208ENST00000599563 RPL36AP83881 106 aaKnown RBP8.74□□□□□ -1.01
SH2D3A-208ENST00000599563 FRZBQ92765 325 aa8.74□□□□□ -1.01
SH2D3A-208ENST00000599563 RPL36ALQ969Q0 106 aaKnown RBP8.74□□□□□ -1.01
SH2D3A-208ENST00000599563 NIT2Q9NQR4 276 aa8.74□□□□□ -1.01
SH2D3A-208ENST00000599563 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
SH2D3A-208ENST00000599563 APCSP02743 223 aa8.73□□□□□ -1.01
SH2D3A-208ENST00000599563 CKS2P33552 79 aa8.73□□□□□ -1.01
SH2D3A-208ENST00000599563 COX19Q49B96 90 aa8.73□□□□□ -1.01
SH2D3A-208ENST00000599563 TRAPPC1Q9Y5R8 145 aa8.73□□□□□ -1.01
SH2D3A-208ENST00000599563 C16orf90A8MZG2 172 aa8.72□□□□□ -1.01
SH2D3A-208ENST00000599563 EREGO14944 169 aa8.72□□□□□ -1.01
SH2D3A-208ENST00000599563 TNFRSF6BO95407 300 aa8.72□□□□□ -1.01
SH2D3A-208ENST00000599563 MT-ND6P03923 174 aa8.72□□□□□ -1.01
SH2D3A-208ENST00000599563 FABP9Q0Z7S8 132 aa8.72□□□□□ -1.01
SH2D3A-208ENST00000599563 C10orf126Q8N4M7 172 aa8.72□□□□□ -1.01
SH2D3A-208ENST00000599563 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
SH2D3A-208ENST00000599563 PRELID3AQ96N28 172 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms