RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 BCL2P10415 239 aa9.97□□□□□ -0.81
LIG1-215ENST00000597901 KCNIP4Q6PIL6 250 aa9.97□□□□□ -0.81
LIG1-215ENST00000597901 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
LIG1-215ENST00000597901 BAALCQ8WXS3 180 aa9.97□□□□□ -0.81
LIG1-215ENST00000597901 UBE2WQ96B02 151 aa9.97□□□□□ -0.81
LIG1-215ENST00000597901 RMI2Q96E14 147 aa9.97□□□□□ -0.81
LIG1-215ENST00000597901 TPPP3Q9BW30 176 aa9.97□□□□□ -0.81
LIG1-215ENST00000597901 TRBV20OR9-2A0A075B6H5 130 aa9.96□□□□□ -0.82
LIG1-215ENST00000597901 LECT2O14960 151 aa9.96□□□□□ -0.82
LIG1-215ENST00000597901 P01737 135 aa9.96□□□□□ -0.82
LIG1-215ENST00000597901 C9orf62Q8N4C0 152 aa9.96□□□□□ -0.82
LIG1-215ENST00000597901 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.96□□□□□ -0.82
LIG1-215ENST00000597901 BIN3Q9NQY0 253 aa9.96□□□□□ -0.82
LIG1-215ENST00000597901 IGKV2D-24A0A075B6R9 120 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 XKRY2A2RUG3 117 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 F2Z2F3 143 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
LIG1-215ENST00000597901 TAGLN2P37802 199 aaKnown RBP9.95□□□□□ -0.82
LIG1-215ENST00000597901 CACNG7P62955 275 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 AKAP14Q86UN6 197 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 NUDT10Q8NFP7 164 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 NUDT11Q96G61 164 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
LIG1-215ENST00000597901 hCG_2014768A0A024R1R8 64 aa9.94□□□□□ -0.82
LIG1-215ENST00000597901 M0QY20 66 aa9.94□□□□□ -0.82
LIG1-215ENST00000597901 INAFM2P0DMQ5 153 aa9.94□□□□□ -0.82
LIG1-215ENST00000597901 LYZL1Q6UWQ5 148 aa9.94□□□□□ -0.82
LIG1-215ENST00000597901 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
LIG1-215ENST00000597901 TMEM70Q9BUB7 260 aa9.94□□□□□ -0.82
LIG1-215ENST00000597901 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
LIG1-215ENST00000597901 HAMPP81172 84 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 Q0VG73 95 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 TMEM97Q5BJF2 176 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 Q5VSD8 79 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 ATRAIDQ6UW56 229 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 ENHOQ6UWT2 76 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 Q8N976 141 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 OCC1Q8TAD7 63 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
LIG1-215ENST00000597901 FAT1Q14517 4588 aa9.92□□□□□ -0.82
LIG1-215ENST00000597901 MGPP08493 103 aa9.92□□□□□ -0.82
LIG1-215ENST00000597901 NTF3P20783 257 aa9.92□□□□□ -0.82
LIG1-215ENST00000597901 BLOC1S1P78537 153 aa9.92□□□□□ -0.82
LIG1-215ENST00000597901 WDR73Q6P4I2 378 aa9.92□□□□□ -0.82
LIG1-215ENST00000597901 C15orf54Q8N8G6 183 aa9.92□□□□□ -0.82
LIG1-215ENST00000597901 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.91□□□□□ -0.82
LIG1-215ENST00000597901 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
LIG1-215ENST00000597901 H7C1H1 209 aa9.91□□□□□ -0.82
LIG1-215ENST00000597901 MPV17L2Q567V2 206 aa9.91□□□□□ -0.82
LIG1-215ENST00000597901 SUMO4Q6EEV6 95 aa9.91□□□□□ -0.82
LIG1-215ENST00000597901 ALKAL2Q6UX46 152 aa9.91□□□□□ -0.82
LIG1-215ENST00000597901 K7EN84 100 aa9.9□□□□□ -0.82
LIG1-215ENST00000597901 PKIAP61925 76 aa9.9□□□□□ -0.82
LIG1-215ENST00000597901 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
LIG1-215ENST00000597901 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
LIG1-215ENST00000597901 TRGC1P0CF51 173 aa9.89□□□□□ -0.83
LIG1-215ENST00000597901 GAGE6Q13070 117 aa9.89□□□□□ -0.83
LIG1-215ENST00000597901 LYPD6BQ8NI32 183 aa9.89□□□□□ -0.83
LIG1-215ENST00000597901 C1orf43Q9BWL3 253 aa9.89□□□□□ -0.83
LIG1-215ENST00000597901 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
LIG1-215ENST00000597901 TRBV25-1A0A075B6N4 114 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 CRPP02741 224 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 NKX2-5P52952 324 aaPredicted RBP9.88□□□□□ -0.83
LIG1-215ENST00000597901 RBX1P62877 108 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 TWIST1Q15672 202 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 IQCJQ1A5X6 159 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 RASL11AQ6T310 242 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 DPH3P1Q9H4G8 78 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 RPP21Q9H633 154 aaKnown RBP9.88□□□□□ -0.83
LIG1-215ENST00000597901 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
LIG1-215ENST00000597901 IGHV1-24A0A0C4DH33 117 aa9.87□□□□□ -0.83
LIG1-215ENST00000597901 TMEM250H0YL14 139 aa9.87□□□□□ -0.83
LIG1-215ENST00000597901 CTRLP40313 264 aa9.87□□□□□ -0.83
LIG1-215ENST00000597901 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
LIG1-215ENST00000597901 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
LIG1-215ENST00000597901 MIAQ16674 131 aa9.86□□□□□ -0.83
LIG1-215ENST00000597901 Q6ZSA8 131 aa9.86□□□□□ -0.83
LIG1-215ENST00000597901 LINC00269Q8N2A0 174 aa9.86□□□□□ -0.83
LIG1-215ENST00000597901 GTSF1Q8WW33 167 aa9.86□□□□□ -0.83
LIG1-215ENST00000597901 PRR34Q9NV39 138 aa9.86□□□□□ -0.83
LIG1-215ENST00000597901 GATCO43716 136 aaKnown RBP9.85□□□□□ -0.83
LIG1-215ENST00000597901 C14orf177Q52M58 125 aa9.84□□□□□ -0.83
LIG1-215ENST00000597901 GATD1Q8NB37 220 aa9.84□□□□□ -0.83
LIG1-215ENST00000597901 DEFB104AQ8WTQ1 72 aa9.84□□□□□ -0.83
LIG1-215ENST00000597901 CEBPGP53567 150 aa9.83□□□□□ -0.84
LIG1-215ENST00000597901 FOXA3P55318 350 aaPredicted RBP9.83□□□□□ -0.84
LIG1-215ENST00000597901 KRTAP26-1Q6PEX3 210 aa9.83□□□□□ -0.84
LIG1-215ENST00000597901 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
LIG1-215ENST00000597901 TMEM243Q9BU79 118 aa9.83□□□□□ -0.84
LIG1-215ENST00000597901 EIF5A2Q9GZV4 153 aaKnown RBP9.83□□□□□ -0.84
LIG1-215ENST00000597901 A0A1B0GUV1 79 aa9.82□□□□□ -0.84
LIG1-215ENST00000597901 A0A1B0GVG6 124 aa9.82□□□□□ -0.84
LIG1-215ENST00000597901 A8MWL6 223 aa9.82□□□□□ -0.84
LIG1-215ENST00000597901 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
LIG1-215ENST00000597901 C20orf203Q8NBC4 194 aa9.82□□□□□ -0.84
LIG1-215ENST00000597901 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
LIG1-215ENST00000597901 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
LIG1-215ENST00000597901 USP17L23D6RBM5 183 aa9.81□□□□□ -0.84
LIG1-215ENST00000597901 HLA-DQA1P01909 254 aa9.81□□□□□ -0.84
LIG1-215ENST00000597901 REG3AQ06141 175 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms