RNA–Protein interactions for RNA: ENST00000597466.1

SHD-203, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 2

Gene SHD, Length 289 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-203ENST00000597466 LINC00269Q8N2A0 174 aa6.94□□□□□ -1.3
SHD-203ENST00000597466 PRR34Q9NV39 138 aa6.94□□□□□ -1.3
SHD-203ENST00000597466 IGLV10-54A0A075B6I4 117 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 MAP1LC3B2A6NCE7 125 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 HMSDA8MTL9 139 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 SSTP61278 116 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 RBX1P62877 108 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 GAGE6Q13070 117 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 ODF1Q14990 250 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 MIAQ16674 131 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 MAP1LC3BQ9GZQ8 125 aa6.93□□□□□ -1.3
SHD-203ENST00000597466 TRBV6-1A0A0K0K1D8 114 aa6.92□□□□□ -1.3
SHD-203ENST00000597466 CHTF8P0CG12 524 aa6.92□□□□□ -1.3
SHD-203ENST00000597466 FHITP49789 147 aa6.92□□□□□ -1.3
SHD-203ENST00000597466 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
SHD-203ENST00000597466 DGAT2L7PQ6IED9 249 aa6.92□□□□□ -1.3
SHD-203ENST00000597466 NKX6-2Q9C056 277 aaPredicted RBP6.92□□□□□ -1.3
SHD-203ENST00000597466 SLPIP03973 132 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 AKR1C3P42330 323 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
SHD-203ENST00000597466 AKR1C8PQ5T2L2 129 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 KCNRGQ8N5I3 272 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 GFRA4Q9GZZ7 299 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 VAX2Q9UIW0 290 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 KIF25-AS1Q9Y6Z4 181 aa6.91□□□□□ -1.3
SHD-203ENST00000597466 A0A0D9SG52 128 aa6.9□□□□□ -1.3
SHD-203ENST00000597466 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
SHD-203ENST00000597466 F5H697 171 aa6.9□□□□□ -1.3
SHD-203ENST00000597466 SNAI2O43623 268 aa6.9□□□□□ -1.3
SHD-203ENST00000597466 PAGE4O60829 102 aa6.9□□□□□ -1.3
SHD-203ENST00000597466 ZNF345Q14585 488 aa6.9□□□□□ -1.3
SHD-203ENST00000597466 C20orf203Q8NBC4 194 aa6.9□□□□□ -1.3
SHD-203ENST00000597466 ZNF471Q9BX82 626 aaPredicted RBP6.9□□□□□ -1.3
SHD-203ENST00000597466 A0A087WYN8 130 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 A0A1B0GV50 99 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 RAB5CP51148 216 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 CNBPP62633 177 aaKnown RBP6.89□□□□□ -1.31
SHD-203ENST00000597466 REG3AQ06141 175 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 SPANXN1Q5VSR9 72 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 Q6ZRU5 148 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 STOML3Q8TAV4 291 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 MLST8Q9BVC4 326 aa6.89□□□□□ -1.31
SHD-203ENST00000597466 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
SHD-203ENST00000597466 hCG_2014768A0A024R1R8 64 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 IGLV4-60A0A075B6I1 120 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 KANTRA0A1W2PQU2 76 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 OR5AL1P0C617 328 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 IQCJQ1A5X6 159 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 TCTE3Q8IZS6 198 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 SPACA4Q8TDM5 124 aa6.88□□□□□ -1.31
SHD-203ENST00000597466 PHOX2AO14813 284 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 BCL2L11O43521 198 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 PFDN1O60925 122 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 CXCL1P09341 107 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 GZMBP10144 247 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 PKIAP61925 76 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 EIF5AP63241 154 aaKnown RBP6.87□□□□□ -1.31
SHD-203ENST00000597466 TMUB2Q71RG4 321 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 TCEAL7Q9BRU2 100 aa6.87□□□□□ -1.31
SHD-203ENST00000597466 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 IGHV1-24A0A0C4DH33 117 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 M0QY20 66 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 MGPP08493 103 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 AKAP14Q86UN6 197 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 BAGE2Q86Y30 109 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.86□□□□□ -1.31
SHD-203ENST00000597466 CLRN3Q8NCR9 226 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 AP1S3Q96PC3 154 aa6.86□□□□□ -1.31
SHD-203ENST00000597466 NKX2-5P52952 324 aaPredicted RBP6.85□□□□□ -1.31
SHD-203ENST00000597466 TMEM97Q5BJF2 176 aa6.85□□□□□ -1.31
SHD-203ENST00000597466 C15orf56Q8N910 161 aa6.85□□□□□ -1.31
SHD-203ENST00000597466 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
SHD-203ENST00000597466 TPPP3Q9BW30 176 aa6.85□□□□□ -1.31
SHD-203ENST00000597466 UMAD1C9J7I0 102 aa6.84□□□□□ -1.31
SHD-203ENST00000597466 SMIM17P0DL12 118 aa6.84□□□□□ -1.31
SHD-203ENST00000597466 FAM213BQ8TBF2 198 aa6.84□□□□□ -1.31
SHD-203ENST00000597466 SFT2D1Q8WV19 159 aa6.84□□□□□ -1.31
SHD-203ENST00000597466 PLAC8Q9NZF1 115 aa6.84□□□□□ -1.31
SHD-203ENST00000597466 LPAP08519 4548 aa6.83□□□□□ -1.32
SHD-203ENST00000597466 IGLC6P0CF74 106 aa6.83□□□□□ -1.32
SHD-203ENST00000597466 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
SHD-203ENST00000597466 COX6A2Q02221 97 aa6.83□□□□□ -1.32
SHD-203ENST00000597466 HIGD2BQ4VC39 106 aa6.83□□□□□ -1.32
SHD-203ENST00000597466 MBD3L1Q8WWY6 194 aa6.83□□□□□ -1.32
SHD-203ENST00000597466 TMEM243Q9BU79 118 aa6.83□□□□□ -1.32
SHD-203ENST00000597466 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.82□□□□□ -1.32
SHD-203ENST00000597466 TRAV8-4A0A0B4J246 113 aa6.82□□□□□ -1.32
SHD-203ENST00000597466 IGKV2-24A0A0C4DH68 120 aa6.82□□□□□ -1.32
SHD-203ENST00000597466 IGKV3OR2-268A0A0C4DH90 116 aa6.82□□□□□ -1.32
SHD-203ENST00000597466 A0A1B0GUV1 79 aa6.82□□□□□ -1.32
SHD-203ENST00000597466 A0A1B0GVG6 124 aa6.82□□□□□ -1.32
SHD-203ENST00000597466 GAGE12HA6NDE8 117 aa6.82□□□□□ -1.32
SHD-203ENST00000597466 P01737 135 aa6.82□□□□□ -1.32
SHD-203ENST00000597466 S100A9P06702 114 aaKnown RBP6.82□□□□□ -1.32
SHD-203ENST00000597466 PRR3P79522 188 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms