RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
IRF3-216ENST00000597180 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
IRF3-216ENST00000597180 PRSS29PA6NIE9 313 aa12.29□□□□□ -0.44
IRF3-216ENST00000597180 LINC01556Q5JQF7 62 aa12.29□□□□□ -0.44
IRF3-216ENST00000597180 BORCS7Q96B45 105 aa12.29□□□□□ -0.44
IRF3-216ENST00000597180 DNAH17Q9UFH2 4485 aa12.28□□□□□ -0.44
IRF3-216ENST00000597180 A0A1B0GUT8 65 aa12.28□□□□□ -0.44
IRF3-216ENST00000597180 DNAJC30Q96LL9 226 aa12.28□□□□□ -0.44
IRF3-216ENST00000597180 UQCC3Q6UW78 93 aa12.27□□□□□ -0.45
IRF3-216ENST00000597180 SMIM15Q7Z3B0 74 aa12.27□□□□□ -0.45
IRF3-216ENST00000597180 C10orf126Q8N4M7 172 aa12.27□□□□□ -0.45
IRF3-216ENST00000597180 NUP35Q8NFH5 326 aa12.27□□□□□ -0.45
IRF3-216ENST00000597180 FAT2Q9NYQ8 4349 aa12.26□□□□□ -0.45
IRF3-216ENST00000597180 SMIM27A0A1W2PRY6 76 aa12.26□□□□□ -0.45
IRF3-216ENST00000597180 RASL11AQ6T310 242 aa12.26□□□□□ -0.45
IRF3-216ENST00000597180 NAT8BQ9UHF3 227 aa12.26□□□□□ -0.45
IRF3-216ENST00000597180 A0A1B0GVY2 172 aa12.25□□□□□ -0.45
IRF3-216ENST00000597180 PNRC1Q12796 327 aaPredicted RBP12.25□□□□□ -0.45
IRF3-216ENST00000597180 DAZ4Q86SG3 579 aaKnown RBP12.25□□□□□ -0.45
IRF3-216ENST00000597180 DAZ3Q9NR90 486 aaKnown RBP12.25□□□□□ -0.45
IRF3-216ENST00000597180 Q6ZRN7 208 aaPredicted RBP12.24□□□□□ -0.45
IRF3-216ENST00000597180 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
IRF3-216ENST00000597180 TMEM191AQ9H0A3 160 aa12.24□□□□□ -0.45
IRF3-216ENST00000597180 NIT2Q9NQR4 276 aa12.24□□□□□ -0.45
IRF3-216ENST00000597180 TNFRSF18Q9Y5U5 241 aa12.24□□□□□ -0.45
IRF3-216ENST00000597180 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
IRF3-216ENST00000597180 RIGQ13278 110 aa12.23□□□□□ -0.45
IRF3-216ENST00000597180 TMEM97Q5BJF2 176 aa12.23□□□□□ -0.45
IRF3-216ENST00000597180 GATD1Q8NB37 220 aa12.23□□□□□ -0.45
IRF3-216ENST00000597180 FRZBQ92765 325 aa12.23□□□□□ -0.45
IRF3-216ENST00000597180 EPPK1P58107 5090 aaKnown RBP12.22□□□□□ -0.45
IRF3-216ENST00000597180 IBA57-AS1B1ANH7 110 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 TNP2Q05952 138 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 NFE4Q86UQ8 179 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 NIT1Q86X76 327 aa12.22□□□□□ -0.45
IRF3-216ENST00000597180 TRAV26-2A0A0B4J265 109 aa12.21□□□□□ -0.45
IRF3-216ENST00000597180 PPP1R2P9O14990 202 aa12.21□□□□□ -0.45
IRF3-216ENST00000597180 Q8N3U1 123 aa12.21□□□□□ -0.45
IRF3-216ENST00000597180 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
IRF3-216ENST00000597180 ADCYAP1P18509 176 aa12.2□□□□□ -0.46
IRF3-216ENST00000597180 NTM-AS1Q6ZSK4 140 aa12.2□□□□□ -0.46
IRF3-216ENST00000597180 COMMD7Q86VX2 200 aa12.2□□□□□ -0.46
IRF3-216ENST00000597180 HECTD4Q9Y4D8 3996 aa12.2□□□□□ -0.46
IRF3-216ENST00000597180 LINC00862A6NCI5 91 aa12.19□□□□□ -0.46
IRF3-216ENST00000597180 LAGE3Q14657 143 aa12.19□□□□□ -0.46
IRF3-216ENST00000597180 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
IRF3-216ENST00000597180 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
IRF3-216ENST00000597180 A0A1B0GW15 77 aa12.18□□□□□ -0.46
IRF3-216ENST00000597180 RAB4AP20338 218 aa12.18□□□□□ -0.46
IRF3-216ENST00000597180 ANAPC16Q96DE5 110 aa12.18□□□□□ -0.46
IRF3-216ENST00000597180 RPL39LQ96EH5 51 aaKnown RBP12.18□□□□□ -0.46
IRF3-216ENST00000597180 MT-ND4LP03901 98 aa12.17□□□□□ -0.46
IRF3-216ENST00000597180 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
IRF3-216ENST00000597180 KCNIP4Q6PIL6 250 aa12.17□□□□□ -0.46
IRF3-216ENST00000597180 AMN1Q8IY45 258 aa12.17□□□□□ -0.46
IRF3-216ENST00000597180 URGCP-MRPS24S4R325 110 aa12.17□□□□□ -0.46
IRF3-216ENST00000597180 TRBV25-1A0A075B6N4 114 aa12.16□□□□□ -0.46
IRF3-216ENST00000597180 F8W036 122 aa12.16□□□□□ -0.46
IRF3-216ENST00000597180 PKIAP61925 76 aa12.16□□□□□ -0.46
IRF3-216ENST00000597180 MRAP2Q96G30 205 aa12.16□□□□□ -0.46
IRF3-216ENST00000597180 SEC11CQ9BY50 192 aa12.16□□□□□ -0.46
IRF3-216ENST00000597180 PKD1P98161 4303 aa12.15□□□□□ -0.46
IRF3-216ENST00000597180 A0A087WX48 190 aa12.15□□□□□ -0.46
IRF3-216ENST00000597180 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
IRF3-216ENST00000597180 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
IRF3-216ENST00000597180 A0A1B0GXF2 115 aa12.15□□□□□ -0.46
IRF3-216ENST00000597180 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
IRF3-216ENST00000597180 GAS8-AS1O95177 125 aa12.14□□□□□ -0.47
IRF3-216ENST00000597180 S100A8P05109 93 aa12.14□□□□□ -0.47
IRF3-216ENST00000597180 CAMPP49913 170 aa12.14□□□□□ -0.47
IRF3-216ENST00000597180 FAM104BQ5XKR9 115 aa12.14□□□□□ -0.47
IRF3-216ENST00000597180 MRPL54Q6P161 138 aaKnown RBP12.14□□□□□ -0.47
IRF3-216ENST00000597180 TRAV8-3A0A0A6YYJ7 113 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 TMEM262E9PQX1 116 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 HBBP68871 147 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 COTL1Q14019 142 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 ELOBQ15370 118 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 ATP5L2Q7Z4Y8 100 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 Q9HAA7 133 aa12.13□□□□□ -0.47
IRF3-216ENST00000597180 SDHAF1A6NFY7 115 aa12.12□□□□□ -0.47
IRF3-216ENST00000597180 RPS10P46783 165 aaKnown RBP12.12□□□□□ -0.47
IRF3-216ENST00000597180 KLK12Q9UKR0 248 aa12.12□□□□□ -0.47
IRF3-216ENST00000597180 NCR2O95944 276 aa12.11□□□□□ -0.47
IRF3-216ENST00000597180 MRPL51Q4U2R6 128 aaKnown RBP12.11□□□□□ -0.47
IRF3-216ENST00000597180 C10orf91Q5T1B1 145 aa12.11□□□□□ -0.47
IRF3-216ENST00000597180 ATRAIDQ6UW56 229 aa12.11□□□□□ -0.47
IRF3-216ENST00000597180 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
IRF3-216ENST00000597180 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
IRF3-216ENST00000597180 GAGE6Q13070 117 aa12.1□□□□□ -0.47
IRF3-216ENST00000597180 NRACQ8N912 160 aa12.1□□□□□ -0.47
IRF3-216ENST00000597180 SMKR1H3BMG3 65 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 I3L3M4 83 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 PPP1R17O96001 155 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 AMTP48728 403 aa12.09□□□□□ -0.47
IRF3-216ENST00000597180 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms