RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 ATRAIDQ6UW56 229 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 NTM-AS1Q6ZSK4 140 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 BAALCQ8WXS3 180 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 TPPP3Q9BW30 176 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 DNAH8Q96JB1 4490 aa8.6□□□□□ -1.03
LIG1-212ENST00000596549 hCG_2014768A0A024R1R8 64 aa8.59□□□□□ -1.03
LIG1-212ENST00000596549 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
LIG1-212ENST00000596549 IGKV2D-24A0A075B6R9 120 aa8.59□□□□□ -1.03
LIG1-212ENST00000596549 A0A087WX48 190 aa8.59□□□□□ -1.03
LIG1-212ENST00000596549 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
LIG1-212ENST00000596549 AKAP14Q86UN6 197 aa8.59□□□□□ -1.03
LIG1-212ENST00000596549 MED9Q9NWA0 146 aa8.59□□□□□ -1.03
LIG1-212ENST00000596549 F5H697 171 aa8.58□□□□□ -1.04
LIG1-212ENST00000596549 MGPP08493 103 aa8.58□□□□□ -1.04
LIG1-212ENST00000596549 RPS20P60866 119 aaKnown RBP8.58□□□□□ -1.04
LIG1-212ENST00000596549 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
LIG1-212ENST00000596549 Q6ZSA8 131 aa8.58□□□□□ -1.04
LIG1-212ENST00000596549 K7EN84 100 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 M0QY20 66 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 P01737 135 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 SMIM17P0DL12 118 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 CTRLP40313 264 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 ENHOQ6UWT2 76 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 ALKAL2Q6UX46 152 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 Q8N976 141 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 FRZBQ92765 325 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 RMI2Q96E14 147 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 DAZAP1Q96EP5 407 aaKnown RBP8.57□□□□□ -1.04
LIG1-212ENST00000596549 COX11Q9Y6N1 276 aa8.57□□□□□ -1.04
LIG1-212ENST00000596549 CACNG7P62955 275 aa8.56□□□□□ -1.04
LIG1-212ENST00000596549 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
LIG1-212ENST00000596549 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
LIG1-212ENST00000596549 C15orf54Q8N8G6 183 aa8.56□□□□□ -1.04
LIG1-212ENST00000596549 NUDT10Q8NFP7 164 aa8.56□□□□□ -1.04
LIG1-212ENST00000596549 NUDT11Q96G61 164 aa8.56□□□□□ -1.04
LIG1-212ENST00000596549 TMEM262E9PQX1 116 aa8.55□□□□□ -1.04
LIG1-212ENST00000596549 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
LIG1-212ENST00000596549 ELOBQ15370 118 aa8.55□□□□□ -1.04
LIG1-212ENST00000596549 KCNIP4Q6PIL6 250 aa8.55□□□□□ -1.04
LIG1-212ENST00000596549 CHCHD5Q9BSY4 110 aa8.55□□□□□ -1.04
LIG1-212ENST00000596549 RNASE7Q9H1E1 156 aaKnown RBP8.55□□□□□ -1.04
LIG1-212ENST00000596549 XKRY2A2RUG3 117 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 F2Z2F3 143 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 CRPP02741 224 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 ANGP03950 147 aaKnown RBP8.54□□□□□ -1.04
LIG1-212ENST00000596549 Q0VG73 95 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 CLPSL2Q6UWE3 100 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 LYPD6BQ8NI32 183 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 RPP21Q9H633 154 aaKnown RBP8.54□□□□□ -1.04
LIG1-212ENST00000596549 BIN3Q9NQY0 253 aa8.54□□□□□ -1.04
LIG1-212ENST00000596549 TRBV25-1A0A075B6N4 114 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 TRGC1P0CF51 173 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 INAFM2P0DMQ5 153 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 NTF3P20783 257 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 NKX2-5P52952 324 aaPredicted RBP8.53□□□□□ -1.04
LIG1-212ENST00000596549 RBX1P62877 108 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 GAGE6Q13070 117 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 TMEM97Q5BJF2 176 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 OCC1Q8TAD7 63 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 C1orf43Q9BWL3 253 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 DPH3P1Q9H4G8 78 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 PRR34Q9NV39 138 aa8.53□□□□□ -1.04
LIG1-212ENST00000596549 H7C1H1 209 aa8.52□□□□□ -1.05
LIG1-212ENST00000596549 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
LIG1-212ENST00000596549 RASL11AQ6T310 242 aa8.52□□□□□ -1.05
LIG1-212ENST00000596549 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.52□□□□□ -1.05
LIG1-212ENST00000596549 GTSF1Q8WW33 167 aa8.52□□□□□ -1.05
LIG1-212ENST00000596549 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
LIG1-212ENST00000596549 IGHV1-24A0A0C4DH33 117 aa8.51□□□□□ -1.05
LIG1-212ENST00000596549 TMEM250H0YL14 139 aa8.51□□□□□ -1.05
LIG1-212ENST00000596549 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
LIG1-212ENST00000596549 PKIAP61925 76 aa8.51□□□□□ -1.05
LIG1-212ENST00000596549 DEFB104AQ8WTQ1 72 aa8.51□□□□□ -1.05
LIG1-212ENST00000596549 A0A1B0GVG6 124 aa8.5□□□□□ -1.05
LIG1-212ENST00000596549 BLOC1S1P78537 153 aa8.5□□□□□ -1.05
LIG1-212ENST00000596549 MIAQ16674 131 aa8.5□□□□□ -1.05
LIG1-212ENST00000596549 WDR73Q6P4I2 378 aa8.5□□□□□ -1.05
LIG1-212ENST00000596549 SCXQ7RTU7 201 aa8.5□□□□□ -1.05
LIG1-212ENST00000596549 C20orf203Q8NBC4 194 aa8.5□□□□□ -1.05
LIG1-212ENST00000596549 PGLYRP4Q96LB8 373 aa8.5□□□□□ -1.05
LIG1-212ENST00000596549 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 USP17L23D6RBM5 183 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 TWIST1Q15672 202 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 NIT2Q9NQR4 276 aa8.49□□□□□ -1.05
LIG1-212ENST00000596549 IGLV4-60A0A075B6I1 120 aa8.48□□□□□ -1.05
LIG1-212ENST00000596549 FAM231DQ6ZW35 169 aa8.48□□□□□ -1.05
LIG1-212ENST00000596549 CEBPGP53567 150 aa8.47□□□□□ -1.05
LIG1-212ENST00000596549 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
LIG1-212ENST00000596549 REG3AQ06141 175 aa8.47□□□□□ -1.05
LIG1-212ENST00000596549 LINC00528Q8N1L1 170 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms