RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 SNAI2O43623 268 aa10.37□□□□□ -0.75
LIM2-202ENST00000596399 GAGE6Q13070 117 aa10.37□□□□□ -0.75
LIM2-202ENST00000596399 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
LIM2-202ENST00000596399 BAGE2Q86Y30 109 aa10.37□□□□□ -0.75
LIM2-202ENST00000596399 SFT2D1Q8WV19 159 aa10.37□□□□□ -0.75
LIM2-202ENST00000596399 DAZAP1Q96EP5 407 aaKnown RBP10.37□□□□□ -0.75
LIM2-202ENST00000596399 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
LIM2-202ENST00000596399 ZNF471Q9BX82 626 aaPredicted RBP10.37□□□□□ -0.75
LIM2-202ENST00000596399 KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
LIM2-202ENST00000596399 OXTP01178 125 aa10.36□□□□□ -0.75
LIM2-202ENST00000596399 RBX1P62877 108 aa10.36□□□□□ -0.75
LIM2-202ENST00000596399 SERTAD4-AS1Q5TG53 156 aa10.36□□□□□ -0.75
LIM2-202ENST00000596399 SPANXN1Q5VSR9 72 aa10.36□□□□□ -0.75
LIM2-202ENST00000596399 KRTAP26-1Q6PEX3 210 aa10.36□□□□□ -0.75
LIM2-202ENST00000596399 LINC00269Q8N2A0 174 aa10.36□□□□□ -0.75
LIM2-202ENST00000596399 FAM213BQ8TBF2 198 aa10.36□□□□□ -0.75
LIM2-202ENST00000596399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.36□□□□□ -0.75
LIM2-202ENST00000596399 RPL37AP61513 92 aaKnown RBP10.35□□□□□ -0.75
LIM2-202ENST00000596399 MBD3L1Q8WWY6 194 aa10.35□□□□□ -0.75
LIM2-202ENST00000596399 DERL1Q9BUN8 251 aa10.35□□□□□ -0.75
LIM2-202ENST00000596399 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
LIM2-202ENST00000596399 GZMBP10144 247 aa10.34□□□□□ -0.75
LIM2-202ENST00000596399 MIAQ16674 131 aa10.34□□□□□ -0.75
LIM2-202ENST00000596399 PRR34Q9NV39 138 aa10.34□□□□□ -0.75
LIM2-202ENST00000596399 VAX2Q9UIW0 290 aa10.34□□□□□ -0.75
LIM2-202ENST00000596399 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
LIM2-202ENST00000596399 S100A9P06702 114 aaKnown RBP10.33□□□□□ -0.76
LIM2-202ENST00000596399 CXCL1P09341 107 aa10.33□□□□□ -0.76
LIM2-202ENST00000596399 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
LIM2-202ENST00000596399 C9orf163Q8N9P6 203 aa10.33□□□□□ -0.76
LIM2-202ENST00000596399 KCNRGQ8N5I3 272 aa10.32□□□□□ -0.76
LIM2-202ENST00000596399 PFDN1O60925 122 aa10.31□□□□□ -0.76
LIM2-202ENST00000596399 RPL35P42766 123 aaKnown RBP10.31□□□□□ -0.76
LIM2-202ENST00000596399 CCL20P78556 96 aa10.31□□□□□ -0.76
LIM2-202ENST00000596399 DGAT2L7PQ6IED9 249 aa10.31□□□□□ -0.76
LIM2-202ENST00000596399 SDIM1Q6ZPB5 146 aa10.31□□□□□ -0.76
LIM2-202ENST00000596399 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.31□□□□□ -0.76
LIM2-202ENST00000596399 TPPP3Q9BW30 176 aa10.31□□□□□ -0.76
LIM2-202ENST00000596399 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
LIM2-202ENST00000596399 MGPP08493 103 aa10.3□□□□□ -0.76
LIM2-202ENST00000596399 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
LIM2-202ENST00000596399 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
LIM2-202ENST00000596399 M0QY20 66 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 H2AFB1P0C5Y9 115 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 RAB5CP51148 216 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 PKIAP61925 76 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 REG3AQ06141 175 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 IQCJQ1A5X6 159 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 C20orf203Q8NBC4 194 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 GFRA4Q9GZZ7 299 aa10.29□□□□□ -0.76
LIM2-202ENST00000596399 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
LIM2-202ENST00000596399 UMAD1C9J7I0 102 aa10.28□□□□□ -0.76
LIM2-202ENST00000596399 TMEM97Q5BJF2 176 aa10.28□□□□□ -0.76
LIM2-202ENST00000596399 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
LIM2-202ENST00000596399 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
LIM2-202ENST00000596399 SLPIP03973 132 aa10.27□□□□□ -0.77
LIM2-202ENST00000596399 IGLC6P0CF74 106 aa10.27□□□□□ -0.77
LIM2-202ENST00000596399 NKX2-5P52952 324 aaPredicted RBP10.27□□□□□ -0.77
LIM2-202ENST00000596399 ZNF345Q14585 488 aa10.27□□□□□ -0.77
LIM2-202ENST00000596399 RGS21Q2M5E4 152 aa10.27□□□□□ -0.77
LIM2-202ENST00000596399 hDV102S1A0JD36 115 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 BCL2L11O43521 198 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 CHTF8P0CG12 524 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 MT1HL1P0DM35 61 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 CENPWQ5EE01 88 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 FER1L6-AS1Q8NA97 138 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 OR2D3Q8NGH3 330 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 GNG13Q9P2W3 67 aa10.26□□□□□ -0.77
LIM2-202ENST00000596399 RAB19A4D1S5 217 aa10.25□□□□□ -0.77
LIM2-202ENST00000596399 C19orf71A6NCJ1 209 aa10.24□□□□□ -0.77
LIM2-202ENST00000596399 CNBPP62633 177 aaKnown RBP10.24□□□□□ -0.77
LIM2-202ENST00000596399 CLRN3Q8NCR9 226 aa10.24□□□□□ -0.77
LIM2-202ENST00000596399 C11orf52Q96A22 123 aa10.24□□□□□ -0.77
LIM2-202ENST00000596399 KANTRA0A1W2PQU2 76 aa10.23□□□□□ -0.77
LIM2-202ENST00000596399 HMSDA8MTL9 139 aa10.23□□□□□ -0.77
LIM2-202ENST00000596399 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
LIM2-202ENST00000596399 TMEM243Q9BU79 118 aa10.23□□□□□ -0.77
LIM2-202ENST00000596399 RNF213Q63HN8 5207 aa10.22□□□□□ -0.77
LIM2-202ENST00000596399 A0A0D9SG52 128 aa10.22□□□□□ -0.77
LIM2-202ENST00000596399 H7C1H1 209 aa10.22□□□□□ -0.77
LIM2-202ENST00000596399 RASL11AQ6T310 242 aa10.22□□□□□ -0.77
LIM2-202ENST00000596399 LYZL1Q6UWQ5 148 aa10.22□□□□□ -0.77
LIM2-202ENST00000596399 DPH3Q96FX2 82 aa10.22□□□□□ -0.77
LIM2-202ENST00000596399 TRBV20OR9-2A0A075B6H5 130 aa10.21□□□□□ -0.77
LIM2-202ENST00000596399 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
LIM2-202ENST00000596399 CACNG7P62955 275 aa10.21□□□□□ -0.77
LIM2-202ENST00000596399 MANBALQ9NQG1 85 aa10.21□□□□□ -0.77
LIM2-202ENST00000596399 IGHV3-64A0A075B6Q5 118 aa10.2□□□□□ -0.78
LIM2-202ENST00000596399 A0A087WYN8 130 aa10.2□□□□□ -0.78
LIM2-202ENST00000596399 TRAV8-4A0A0B4J246 113 aa10.2□□□□□ -0.78
LIM2-202ENST00000596399 P01737 135 aa10.2□□□□□ -0.78
LIM2-202ENST00000596399 NTF3P20783 257 aa10.2□□□□□ -0.78
LIM2-202ENST00000596399 GNG4P50150 75 aa10.2□□□□□ -0.78
LIM2-202ENST00000596399 RPS20P60866 119 aaKnown RBP10.2□□□□□ -0.78
LIM2-202ENST00000596399 NIT2Q9NQR4 276 aa10.2□□□□□ -0.78
LIM2-202ENST00000596399 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
LIM2-202ENST00000596399 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
LIM2-202ENST00000596399 TRAV1-1A0A0B4J248 108 aa10.18□□□□□ -0.78
LIM2-202ENST00000596399 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms