RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MT-ATP8P03928 68 aa9.77□□□□□ -0.84
VRK3-209ENST00000594948 MSMBP08118 114 aa9.77□□□□□ -0.84
VRK3-209ENST00000594948 MUSTN1Q8IVN3 82 aa9.77□□□□□ -0.84
VRK3-209ENST00000594948 GEMIN7Q9H840 131 aaKnown RBP9.77□□□□□ -0.84
VRK3-209ENST00000594948 SPTBN1Q01082 2364 aaKnown RBP9.77□□□□□ -0.85
VRK3-209ENST00000594948 MRPS36P82909 103 aaKnown RBP9.77□□□□□ -0.85
VRK3-209ENST00000594948 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 A0A0J9YXV3 536 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 ATXN8Q156A1 80 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 WFDC12Q8WWY7 111 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
VRK3-209ENST00000594948 HIVEP3Q5T1R4 2406 aa9.76□□□□□ -0.85
VRK3-209ENST00000594948 TRAV12-2A0A075B6T6 113 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 C9JAW5 83 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 DEFB104AQ8WTQ1 72 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 CCL19Q99731 98 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 SPANXDQ9BXN6 97 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 SPTA1P02549 2419 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 GATA3P23771 443 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 RNF183Q96D59 192 aa9.75□□□□□ -0.85
VRK3-209ENST00000594948 CSMD1Q96PZ7 3565 aa9.74□□□□□ -0.85
VRK3-209ENST00000594948 A8MTW9 85 aa9.74□□□□□ -0.85
VRK3-209ENST00000594948 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
VRK3-209ENST00000594948 SPINK13Q1W4C9 94 aa9.74□□□□□ -0.85
VRK3-209ENST00000594948 RAX2Q96IS3 184 aa9.74□□□□□ -0.85
VRK3-209ENST00000594948 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
VRK3-209ENST00000594948 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
VRK3-209ENST00000594948 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
VRK3-209ENST00000594948 LITAFQ99732 161 aa9.73□□□□□ -0.85
VRK3-209ENST00000594948 CEP295Q9C0D2 2601 aa9.73□□□□□ -0.85
VRK3-209ENST00000594948 IGHV1-58A0A0C4DH39 117 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 CD28P10747 220 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 TRBV10-2A0A0K0K1G8 114 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 TINCRA0A1B0GVN0 87 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 B4DSR2 109 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 CITED1Q99966 193 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
VRK3-209ENST00000594948 IGHV4-30-2A0A087WSY4 118 aa9.71□□□□□ -0.85
VRK3-209ENST00000594948 TIMM17BO60830 172 aa9.71□□□□□ -0.85
VRK3-209ENST00000594948 TGFAP01135 160 aa9.71□□□□□ -0.85
VRK3-209ENST00000594948 Q5PR19 223 aa9.71□□□□□ -0.85
VRK3-209ENST00000594948 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.85
VRK3-209ENST00000594948 COL6A6A6NMZ7 2263 aa9.71□□□□□ -0.85
VRK3-209ENST00000594948 Q1RN00 199 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 TMEM95Q3KNT9 176 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 YAE1D1Q9NRH1 226 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 PRRC2AP48634 2157 aaKnown RBP9.7□□□□□ -0.86
VRK3-209ENST00000594948 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 TRAV26-1A0A087WT03 109 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 ELANEP08246 267 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 GNLYP22749 145 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 ATP5J2P56134 94 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 MIAQ16674 131 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
VRK3-209ENST00000594948 NACAE9PAV3 2078 aa9.69□□□□□ -0.86
VRK3-209ENST00000594948 AVPP01185 164 aa9.69□□□□□ -0.86
VRK3-209ENST00000594948 DSCR9P59020 149 aa9.69□□□□□ -0.86
VRK3-209ENST00000594948 LY6DQ14210 128 aa9.69□□□□□ -0.86
VRK3-209ENST00000594948 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
VRK3-209ENST00000594948 DNAJC30Q96LL9 226 aa9.69□□□□□ -0.86
VRK3-209ENST00000594948 SPXQ9BT56 116 aa9.69□□□□□ -0.86
VRK3-209ENST00000594948 H3BT86 120 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 TRIAP1O43715 76 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 IFITM1P13164 125 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 Q6Q795 121 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 TEX29Q8N6K0 151 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 NTN5Q8WTR8 489 aaPredicted RBP9.68□□□□□ -0.86
VRK3-209ENST00000594948 LINC00467Q9BRT7 94 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 PRORYQ9H606 182 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 NDUFA12Q9UI09 145 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 NBASA2RRP1 2371 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 H7C2G1 150 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 COX6CP09669 75 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 RBMY1A1P0DJD3 496 aaKnown RBP9.68□□□□□ -0.86
VRK3-209ENST00000594948 RBMY1CP0DJD4 496 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 SYNJ2BPP57105 145 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 RBMY1FQ15415 496 aaKnown RBP9.68□□□□□ -0.86
VRK3-209ENST00000594948 UBE2E2Q96LR5 201 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 CHCHD7Q9BUK0 85 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 UBE2D4Q9Y2X8 147 aa9.68□□□□□ -0.86
VRK3-209ENST00000594948 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
VRK3-209ENST00000594948 ZNF415Q09FC8 603 aa9.67□□□□□ -0.86
VRK3-209ENST00000594948 DEFB112Q30KQ8 113 aa9.67□□□□□ -0.86
VRK3-209ENST00000594948 H3BMM0 161 aa9.66□□□□□ -0.86
VRK3-209ENST00000594948 J3QLI3 93 aa9.66□□□□□ -0.86
VRK3-209ENST00000594948 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
VRK3-209ENST00000594948 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
VRK3-209ENST00000594948 TRAV8-3A0A0A6YYJ7 113 aa9.66□□□□□ -0.86
VRK3-209ENST00000594948 TIRAPP58753 221 aa9.66□□□□□ -0.86
VRK3-209ENST00000594948 C10orf99Q6UWK7 81 aa9.66□□□□□ -0.86
VRK3-209ENST00000594948 DOPEY2Q9Y3R5 2298 aa9.65□□□□□ -0.86
VRK3-209ENST00000594948 IGLV5-45A0A087WSX0 123 aa9.65□□□□□ -0.86
VRK3-209ENST00000594948 TRAV8-4A0A0B4J246 113 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms