RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 HSPG2P98160 4391 aa11.89□□□□□ -0.51
SHKBP1-204ENST00000594862 GZMBP10144 247 aa11.88□□□□□ -0.51
SHKBP1-204ENST00000594862 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
SHKBP1-204ENST00000594862 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-204ENST00000594862 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-204ENST00000594862 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-204ENST00000594862 KIF25-AS1Q9Y6Z4 181 aa11.88□□□□□ -0.51
SHKBP1-204ENST00000594862 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
SHKBP1-204ENST00000594862 CTRLP40313 264 aa11.87□□□□□ -0.51
SHKBP1-204ENST00000594862 SSTP61278 116 aa11.87□□□□□ -0.51
SHKBP1-204ENST00000594862 DNAJC30Q96LL9 226 aa11.87□□□□□ -0.51
SHKBP1-204ENST00000594862 MGPP08493 103 aa11.86□□□□□ -0.51
SHKBP1-204ENST00000594862 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
SHKBP1-204ENST00000594862 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
SHKBP1-204ENST00000594862 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
SHKBP1-204ENST00000594862 LYZL1Q6UWQ5 148 aa11.85□□□□□ -0.51
SHKBP1-204ENST00000594862 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
SHKBP1-204ENST00000594862 CNFNQ9BYD5 112 aa11.85□□□□□ -0.51
SHKBP1-204ENST00000594862 DPH3P1Q9H4G8 78 aa11.85□□□□□ -0.51
SHKBP1-204ENST00000594862 Q0VG73 95 aa11.84□□□□□ -0.51
SHKBP1-204ENST00000594862 Q8N3U1 123 aa11.84□□□□□ -0.51
SHKBP1-204ENST00000594862 MAPKAPK5-AS1Q8N8E1 139 aa11.84□□□□□ -0.51
SHKBP1-204ENST00000594862 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-204ENST00000594862 K7EN84 100 aa11.83□□□□□ -0.52
SHKBP1-204ENST00000594862 NKX2-5P52952 324 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-204ENST00000594862 FAM231DQ6ZW35 169 aa11.83□□□□□ -0.52
SHKBP1-204ENST00000594862 Q8N814 137 aa11.83□□□□□ -0.52
SHKBP1-204ENST00000594862 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 M0QY20 66 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 NTF3P20783 257 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 GCSHP23434 173 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 SMIM15Q7Z3B0 74 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 FRZBQ92765 325 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 FAM210AQ96ND0 272 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 RNASE7Q9H1E1 156 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 KLK12Q9UKR0 248 aa11.82□□□□□ -0.52
SHKBP1-204ENST00000594862 TRBV25-1A0A075B6N4 114 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 A0A1B0GVG6 124 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 A8MWL6 223 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 CRPP02741 224 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 CT83Q5H943 113 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 RASL11AQ6T310 242 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 SMIM7Q9BQ49 75 aa11.81□□□□□ -0.52
SHKBP1-204ENST00000594862 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-204ENST00000594862 CEBPGP53567 150 aa11.8□□□□□ -0.52
SHKBP1-204ENST00000594862 TWIST1Q15672 202 aa11.8□□□□□ -0.52
SHKBP1-204ENST00000594862 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
SHKBP1-204ENST00000594862 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
SHKBP1-204ENST00000594862 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
SHKBP1-204ENST00000594862 ATRAIDQ6UW56 229 aa11.79□□□□□ -0.52
SHKBP1-204ENST00000594862 Q8N1X5 172 aa11.79□□□□□ -0.52
SHKBP1-204ENST00000594862 BORCS7Q96B45 105 aa11.79□□□□□ -0.52
SHKBP1-204ENST00000594862 NIT2Q9NQR4 276 aa11.79□□□□□ -0.52
SHKBP1-204ENST00000594862 LRP1BQ9NZR2 4599 aa11.79□□□□□ -0.52
SHKBP1-204ENST00000594862 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
SHKBP1-204ENST00000594862 PGLYRP4Q96LB8 373 aa11.78□□□□□ -0.52
SHKBP1-204ENST00000594862 ZNF727A8MUV8 499 aa11.77□□□□□ -0.53
SHKBP1-204ENST00000594862 MPV17L2Q567V2 206 aa11.77□□□□□ -0.53
SHKBP1-204ENST00000594862 TEX261Q6UWH6 196 aa11.77□□□□□ -0.53
SHKBP1-204ENST00000594862 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.53
SHKBP1-204ENST00000594862 C1orf43Q9BWL3 253 aa11.77□□□□□ -0.53
SHKBP1-204ENST00000594862 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 FUSP35637 526 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 KRTAP10-1P60331 282 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 MIAQ16674 131 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 FAM74A3Q4VXF1 159 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 NTM-AS1Q6ZSK4 140 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 LINC01551Q86U37 167 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 C15orf54Q8N8G6 183 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 Q8N976 141 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
SHKBP1-204ENST00000594862 FAM231BA6NCW3 169 aa11.75□□□□□ -0.53
SHKBP1-204ENST00000594862 SRP19P09132 144 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-204ENST00000594862 GFRA4Q9GZZ7 299 aa11.75□□□□□ -0.53
SHKBP1-204ENST00000594862 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-204ENST00000594862 C14orf177Q52M58 125 aa11.74□□□□□ -0.53
SHKBP1-204ENST00000594862 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
SHKBP1-204ENST00000594862 SMDT1Q9H4I9 107 aa11.74□□□□□ -0.53
SHKBP1-204ENST00000594862 OSTCQ9NRP0 149 aa11.74□□□□□ -0.53
SHKBP1-204ENST00000594862 RBX1P62877 108 aa11.73□□□□□ -0.53
SHKBP1-204ENST00000594862 COTL1Q14019 142 aa11.73□□□□□ -0.53
SHKBP1-204ENST00000594862 TSKUQ8WUA8 353 aa11.73□□□□□ -0.53
SHKBP1-204ENST00000594862 GAGE6Q13070 117 aa11.72□□□□□ -0.53
SHKBP1-204ENST00000594862 ENHOQ6UWT2 76 aa11.72□□□□□ -0.53
SHKBP1-204ENST00000594862 BAALCQ8WXS3 180 aa11.72□□□□□ -0.53
SHKBP1-204ENST00000594862 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
SHKBP1-204ENST00000594862 DNAH5Q8TE73 4624 aa11.71□□□□□ -0.53
SHKBP1-204ENST00000594862 LECT2O14960 151 aa11.71□□□□□ -0.53
SHKBP1-204ENST00000594862 WFDC2Q14508 124 aa11.71□□□□□ -0.53
SHKBP1-204ENST00000594862 PEA15Q15121 130 aa11.71□□□□□ -0.53
SHKBP1-204ENST00000594862 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
SHKBP1-204ENST00000594862 A0A1B0GUV1 79 aa11.7□□□□□ -0.54
SHKBP1-204ENST00000594862 UBE2L6O14933 153 aa11.7□□□□□ -0.54
SHKBP1-204ENST00000594862 NCR2O95944 276 aa11.7□□□□□ -0.54
SHKBP1-204ENST00000594862 XGP55808 180 aa11.7□□□□□ -0.54
SHKBP1-204ENST00000594862 TMEM241Q24JQ0 296 aa11.7□□□□□ -0.54
SHKBP1-204ENST00000594862 GATD1Q8NB37 220 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms