RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 BAALCQ8WXS3 180 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 A6NDX4 124 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 UBE2BP63146 152 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 C16orf74Q96GX8 76 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 CEP295Q9C0D2 2601 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 IGHG4P01861 327 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 U3KQE9 123 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
DNMT1-228ENST00000592705 TTTY13Q9BZ97 58 aa9.73□□□□□ -0.85
DNMT1-228ENST00000592705 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-228ENST00000592705 IGKV2-29A2NJV5 120 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-228ENST00000592705 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
DNMT1-228ENST00000592705 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
DNMT1-228ENST00000592705 TP53TG3Q9ULZ0 132 aa9.73□□□□□ -0.85
DNMT1-228ENST00000592705 ARHGAP21Q5T5U3 1957 aa9.73□□□□□ -0.85
DNMT1-228ENST00000592705 HERV-K104P63124 156 aa9.72□□□□□ -0.85
DNMT1-228ENST00000592705 ODF3BA8MYP8 253 aa9.72□□□□□ -0.85
DNMT1-228ENST00000592705 Q9H8V8 135 aa9.72□□□□□ -0.85
DNMT1-228ENST00000592705 DSCAMO60469 2012 aa9.72□□□□□ -0.85
DNMT1-228ENST00000592705 A0A0J9YXV3 536 aa9.71□□□□□ -0.85
DNMT1-228ENST00000592705 CRYGBP07316 175 aa9.71□□□□□ -0.85
DNMT1-228ENST00000592705 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.71□□□□□ -0.85
DNMT1-228ENST00000592705 CRLF1O75462 422 aa9.71□□□□□ -0.86
DNMT1-228ENST00000592705 MUSTN1Q8IVN3 82 aa9.71□□□□□ -0.86
DNMT1-228ENST00000592705 A4D1N5 150 aa9.71□□□□□ -0.86
DNMT1-228ENST00000592705 FSTL3O95633 263 aa9.71□□□□□ -0.86
DNMT1-228ENST00000592705 IGLC6P0CF74 106 aa9.71□□□□□ -0.86
DNMT1-228ENST00000592705 ANKRD29Q8N6D5 301 aa9.71□□□□□ -0.86
DNMT1-228ENST00000592705 C11orf86A6NJI1 115 aa9.7□□□□□ -0.86
DNMT1-228ENST00000592705 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-228ENST00000592705 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
DNMT1-228ENST00000592705 GPHB5Q86YW7 130 aa9.7□□□□□ -0.86
DNMT1-228ENST00000592705 CHD3Q12873 2000 aaKnown RBP9.7□□□□□ -0.86
DNMT1-228ENST00000592705 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
DNMT1-228ENST00000592705 Q8N1Y9 231 aa9.7□□□□□ -0.86
DNMT1-228ENST00000592705 DYSFO75923 2080 aa9.7□□□□□ -0.86
DNMT1-228ENST00000592705 WFDC2Q14508 124 aa9.69□□□□□ -0.86
DNMT1-228ENST00000592705 TEN1Q86WV5 123 aa9.69□□□□□ -0.86
DNMT1-228ENST00000592705 Q6ZSV7 163 aa9.69□□□□□ -0.86
DNMT1-228ENST00000592705 MED12LQ86YW9 2145 aa9.69□□□□□ -0.86
DNMT1-228ENST00000592705 NXPH4O95158 308 aa9.68□□□□□ -0.86
DNMT1-228ENST00000592705 ACYP1P07311 99 aa9.68□□□□□ -0.86
DNMT1-228ENST00000592705 UBL5Q9BZL1 73 aa9.68□□□□□ -0.86
DNMT1-228ENST00000592705 ANKRD11Q6UB99 2663 aaPredicted RBP9.68□□□□□ -0.86
DNMT1-228ENST00000592705 G3V4G9 280 aa9.68□□□□□ -0.86
DNMT1-228ENST00000592705 CCDC140Q96MF4 163 aa9.68□□□□□ -0.86
DNMT1-228ENST00000592705 GYPEP15421 78 aa9.67□□□□□ -0.86
DNMT1-228ENST00000592705 BAALC-AS2P0C853 105 aa9.67□□□□□ -0.86
DNMT1-228ENST00000592705 RPL32P62910 135 aaKnown RBP9.67□□□□□ -0.86
DNMT1-228ENST00000592705 ABCA12Q86UK0 2595 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 K7EQD1 137 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 DAZ2Q13117 558 aaKnown RBP9.66□□□□□ -0.86
DNMT1-228ENST00000592705 UNQ9165/PRO28630Q6UXU0 137 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 C22orf34Q6ZV56 151 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 DAZ4Q86SG3 579 aaKnown RBP9.66□□□□□ -0.86
DNMT1-228ENST00000592705 DAZ3Q9NR90 486 aaKnown RBP9.66□□□□□ -0.86
DNMT1-228ENST00000592705 LINC01620Q4KN68 170 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 TMEM126AQ9H061 195 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 FOXI1Q12951 378 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 ATP6V0E2Q8NHE4 81 aa9.66□□□□□ -0.86
DNMT1-228ENST00000592705 LY6LH3BQJ8 138 aa9.65□□□□□ -0.86
DNMT1-228ENST00000592705 TMEM61Q8N0U2 210 aa9.65□□□□□ -0.86
DNMT1-228ENST00000592705 U3KQK5 164 aa9.65□□□□□ -0.86
DNMT1-228ENST00000592705 DEFB4AO15263 64 aa9.65□□□□□ -0.87
DNMT1-228ENST00000592705 ESM1Q9NQ30 184 aa9.65□□□□□ -0.87
DNMT1-228ENST00000592705 DEFB1P60022 68 aa9.64□□□□□ -0.87
DNMT1-228ENST00000592705 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
DNMT1-228ENST00000592705 C20orf203Q8NBC4 194 aa9.64□□□□□ -0.87
DNMT1-228ENST00000592705 A0A0J9YX75 114 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 Q6ZQT7 251 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 EPG5Q9HCE0 2579 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 CRIP1P50238 77 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 C11orf71Q6IPW1 123 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 SMR3AQ99954 134 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 IGHV3-30-3P0DP02 117 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 KRTAP10-9P60411 292 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 EBI3Q14213 229 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 LINC01006Q8NI28 216 aa9.63□□□□□ -0.87
DNMT1-228ENST00000592705 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
DNMT1-228ENST00000592705 BBC3Q96PG8 261 aaPredicted RBP9.62□□□□□ -0.87
DNMT1-228ENST00000592705 LRP4O75096 1905 aa9.62□□□□□ -0.87
DNMT1-228ENST00000592705 TLN2Q9Y4G6 2542 aa9.62□□□□□ -0.87
DNMT1-228ENST00000592705 CLPSL2Q6UWE3 100 aa9.62□□□□□ -0.87
DNMT1-228ENST00000592705 XCL1P47992 114 aa9.62□□□□□ -0.87
DNMT1-228ENST00000592705 ORMDL1Q9P0S3 153 aa9.62□□□□□ -0.87
DNMT1-228ENST00000592705 H0YGX0 51 aa9.62□□□□□ -0.87
DNMT1-228ENST00000592705 ATG2AQ2TAZ0 1938 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 DSCR8Q96T75 97 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 TRBV7-3A0A075B6L6 115 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 CRYBA4P53673 196 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 IGHV1-58A0A0C4DH39 117 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 ODF3Q96PU9 254 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
DNMT1-228ENST00000592705 NEXN-AS1Q8NBZ9 246 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms