RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.56
MBD1-227ENST00000592060 LINC01006Q8NI28 216 aa11.52□□□□□ -0.56
MBD1-227ENST00000592060 CLUHP3Q96NS8 147 aa11.52□□□□□ -0.56
MBD1-227ENST00000592060 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.56
MBD1-227ENST00000592060 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.56
MBD1-227ENST00000592060 PRSS29PA6NIE9 313 aa11.52□□□□□ -0.57
MBD1-227ENST00000592060 PRM2P04554 102 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 RPL39P62891 51 aaKnown RBP11.5□□□□□ -0.57
MBD1-227ENST00000592060 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 UFSP1Q6NVU6 142 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 DEFB104AQ8WTQ1 72 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 PTH2Q96A98 100 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
MBD1-227ENST00000592060 TRBV25-1A0A075B6N4 114 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 M0R2P5 195 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 HTN1P15515 57 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 RHOHQ15669 191 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 PIK3CD-AS1Q5SR53 167 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 MAPKAPK5-AS1Q8N8E1 139 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 CCDC168Q8NDH2 2452 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 NACAE9PAV3 2078 aa11.5□□□□□ -0.57
MBD1-227ENST00000592060 CCL25O15444 150 aa11.49□□□□□ -0.57
MBD1-227ENST00000592060 INSP01308 110 aa11.49□□□□□ -0.57
MBD1-227ENST00000592060 UBE2V1Q13404 147 aa11.49□□□□□ -0.57
MBD1-227ENST00000592060 C11orf72Q8NBR9 251 aa11.49□□□□□ -0.57
MBD1-227ENST00000592060 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
MBD1-227ENST00000592060 CHAC1Q9BUX1 264 aa11.49□□□□□ -0.57
MBD1-227ENST00000592060 IGLV4-69A0A075B6H9 119 aa11.48□□□□□ -0.57
MBD1-227ENST00000592060 A6NDN8 102 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 SCGB2A2Q13296 93 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 TRAV8-6A0A0B4J262 113 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 A8MWV9 139 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 P0DMU3 169 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 FAM231AP0DMU4 169 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 FAM231CP0DMU5 169 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 PTTG1IPP53801 180 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 HILS1P60008 231 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 PMVKQ15126 192 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 LINC01587Q99440 93 aa11.47□□□□□ -0.57
MBD1-227ENST00000592060 E9PLD3 99 aa11.46□□□□□ -0.58
MBD1-227ENST00000592060 H3BRM9 83 aa11.46□□□□□ -0.58
MBD1-227ENST00000592060 I3L3M4 83 aa11.46□□□□□ -0.58
MBD1-227ENST00000592060 CST9LQ9H4G1 147 aa11.46□□□□□ -0.58
MBD1-227ENST00000592060 PROK1P58294 105 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 VAMP3Q15836 100 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 ZNF418Q8TF45 676 aaPredicted RBP11.45□□□□□ -0.58
MBD1-227ENST00000592060 IGHV3-73A0A0B4J1V6 119 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 ADARB2-AS1A8MUL3 147 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 OR11H12B2RN74 326 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 CFAP126Q5VTH2 177 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 OR11H2Q8NH07 326 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 SPXQ9BT56 116 aa11.45□□□□□ -0.58
MBD1-227ENST00000592060 CUBNO60494 3623 aa11.44□□□□□ -0.58
MBD1-227ENST00000592060 NDUFA7O95182 113 aa11.44□□□□□ -0.58
MBD1-227ENST00000592060 BEAN1Q3B7T3 259 aa11.44□□□□□ -0.58
MBD1-227ENST00000592060 STHQ8IWL8 128 aa11.44□□□□□ -0.58
MBD1-227ENST00000592060 C20orf203Q8NBC4 194 aa11.44□□□□□ -0.58
MBD1-227ENST00000592060 FXYD2P54710 66 aa11.43□□□□□ -0.58
MBD1-227ENST00000592060 PRADC1Q9BSG0 188 aa11.43□□□□□ -0.58
MBD1-227ENST00000592060 XCL2Q9UBD3 114 aa11.43□□□□□ -0.58
MBD1-227ENST00000592060 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
MBD1-227ENST00000592060 Q6ZSN1 163 aa11.43□□□□□ -0.58
MBD1-227ENST00000592060 C1orf158Q8N1D5 194 aa11.43□□□□□ -0.58
MBD1-227ENST00000592060 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
MBD1-227ENST00000592060 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
MBD1-227ENST00000592060 C9orf118A6NHY6 69 aa11.42□□□□□ -0.58
MBD1-227ENST00000592060 GCSHP23434 173 aa11.42□□□□□ -0.58
MBD1-227ENST00000592060 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
MBD1-227ENST00000592060 TM2D2Q9BX73 214 aa11.42□□□□□ -0.58
MBD1-227ENST00000592060 MRPL16Q9NX20 251 aaKnown RBP11.42□□□□□ -0.58
MBD1-227ENST00000592060 ACANP16112 2415 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 K7EP13 123 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 RHODO00212 210 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 RS1O15537 224 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 AZU1P20160 251 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 TAL2Q16559 108 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 CEND1Q8N111 149 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 SMR3AQ99954 134 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 EMP1P54849 157 aa11.41□□□□□ -0.58
MBD1-227ENST00000592060 SAP30O75446 220 aa11.4□□□□□ -0.58
MBD1-227ENST00000592060 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
MBD1-227ENST00000592060 OPRPNQ99935 248 aaPredicted RBP11.4□□□□□ -0.58
MBD1-227ENST00000592060 Q9UF83 564 aa11.4□□□□□ -0.58
MBD1-227ENST00000592060 C2CD3Q4AC94 2353 aa11.4□□□□□ -0.58
MBD1-227ENST00000592060 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
MBD1-227ENST00000592060 IGHV3-53P01767 116 aa11.39□□□□□ -0.59
MBD1-227ENST00000592060 ZNRF2Q8NHG8 242 aa11.39□□□□□ -0.59
MBD1-227ENST00000592060 WNK1Q9H4A3 2382 aa11.39□□□□□ -0.59
MBD1-227ENST00000592060 IGLV4-3A0A075B6K6 122 aa11.39□□□□□ -0.59
MBD1-227ENST00000592060 NFE4Q86UQ8 179 aa11.39□□□□□ -0.59
MBD1-227ENST00000592060 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
MBD1-227ENST00000592060 CMC4P56277 68 aaPredicted RBP11.38□□□□□ -0.59
MBD1-227ENST00000592060 HERVK_113P61574 105 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 OR4C5Q8NGB2 326 aa11.37□□□□□ -0.59
MBD1-227ENST00000592060 RNASE8Q8TDE3 154 aaKnown RBP11.37□□□□□ -0.59
MBD1-227ENST00000592060 PHLDA1Q8WV24 401 aaPredicted RBP11.37□□□□□ -0.59
MBD1-227ENST00000592060 FAM110AQ9BQ89 295 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms