RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 TSHBP01222 138 aa14.41□□□□□ -0.1
MBD3-209ENST00000592012 TRPT1Q86TN4 253 aaKnown RBP14.41□□□□□ -0.1
MBD3-209ENST00000592012 LINC01549A6NIU2 74 aa14.41□□□□□ -0.1
MBD3-209ENST00000592012 SEC11AP67812 179 aa14.4□□□□□ -0.1
MBD3-209ENST00000592012 HSD52Q0P140 79 aa14.4□□□□□ -0.1
MBD3-209ENST00000592012 RIPPLY3P57055 190 aa14.4□□□□□ -0.1
MBD3-209ENST00000592012 RPL39P62891 51 aaKnown RBP14.4□□□□□ -0.1
MBD3-209ENST00000592012 CLUHP3Q96NS8 147 aa14.4□□□□□ -0.1
MBD3-209ENST00000592012 SCGB2A2Q13296 93 aa14.39□□□□□ -0.11
MBD3-209ENST00000592012 JMJD8Q96S16 334 aa14.39□□□□□ -0.11
MBD3-209ENST00000592012 M0R2P5 195 aa14.39□□□□□ -0.11
MBD3-209ENST00000592012 LINC01587Q99440 93 aa14.39□□□□□ -0.11
MBD3-209ENST00000592012 LINC00467Q9BRT7 94 aa14.39□□□□□ -0.11
MBD3-209ENST00000592012 HIGD1BQ9P298 99 aa14.39□□□□□ -0.11
MBD3-209ENST00000592012 HIVEP2P31629 2446 aa14.38□□□□□ -0.11
MBD3-209ENST00000592012 HILS1P60008 231 aa14.38□□□□□ -0.11
MBD3-209ENST00000592012 NACAE9PAV3 2078 aa14.38□□□□□ -0.11
MBD3-209ENST00000592012 TRBV25-1A0A075B6N4 114 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 ZNF415Q09FC8 603 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 PIK3CD-AS1Q5SR53 167 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 ZNF418Q8TF45 676 aaPredicted RBP14.37□□□□□ -0.11
MBD3-209ENST00000592012 EDA2RQ9HAV5 297 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 INSP01308 110 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 UFSP1Q6NVU6 142 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 MAPKAPK5-AS1Q8N8E1 139 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 C11orf72Q8NBR9 251 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 TIMM17AQ99595 171 aa14.37□□□□□ -0.11
MBD3-209ENST00000592012 PTH2Q96A98 100 aa14.36□□□□□ -0.11
MBD3-209ENST00000592012 TMEM141Q96I45 108 aa14.36□□□□□ -0.11
MBD3-209ENST00000592012 IGHV3-73A0A0B4J1V6 119 aa14.36□□□□□ -0.11
MBD3-209ENST00000592012 TRAV8-6A0A0B4J262 113 aa14.36□□□□□ -0.11
MBD3-209ENST00000592012 SMR3AQ99954 134 aa14.36□□□□□ -0.11
MBD3-209ENST00000592012 A8MWV9 139 aa14.35□□□□□ -0.11
MBD3-209ENST00000592012 PROK1P58294 105 aa14.35□□□□□ -0.11
MBD3-209ENST00000592012 UBE2V1Q13404 147 aa14.35□□□□□ -0.11
MBD3-209ENST00000592012 NSUN5P1Q3KNT7 163 aa14.35□□□□□ -0.11
MBD3-209ENST00000592012 STHQ8IWL8 128 aa14.35□□□□□ -0.11
MBD3-209ENST00000592012 SETXQ7Z333 2677 aaKnown RBP14.35□□□□□ -0.11
MBD3-209ENST00000592012 NOTCH2Q04721 2471 aa14.35□□□□□ -0.11
MBD3-209ENST00000592012 OR11H12B2RN74 326 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 I3L3M4 83 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 CCL25O15444 150 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 P0DMU3 169 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 FAM231AP0DMU4 169 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 FAM231CP0DMU5 169 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 RHOHQ15669 191 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 XCL2Q9UBD3 114 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 JMJD1CQ15652 2540 aa14.34□□□□□ -0.11
MBD3-209ENST00000592012 PMVKQ15126 192 aa14.33□□□□□ -0.11
MBD3-209ENST00000592012 CHAC1Q9BUX1 264 aa14.33□□□□□ -0.11
MBD3-209ENST00000592012 CST9LQ9H4G1 147 aa14.33□□□□□ -0.11
MBD3-209ENST00000592012 A6NDN8 102 aa14.33□□□□□ -0.12
MBD3-209ENST00000592012 PTTG1IPP53801 180 aa14.33□□□□□ -0.12
MBD3-209ENST00000592012 IGLV4-69A0A075B6H9 119 aa14.32□□□□□ -0.12
MBD3-209ENST00000592012 CFAP126Q5VTH2 177 aa14.32□□□□□ -0.12
MBD3-209ENST00000592012 NOTCH3Q9UM47 2321 aa14.32□□□□□ -0.12
MBD3-209ENST00000592012 VAMP3Q15836 100 aa14.32□□□□□ -0.12
MBD3-209ENST00000592012 SPXQ9BT56 116 aa14.32□□□□□ -0.12
MBD3-209ENST00000592012 ADARB2-AS1A8MUL3 147 aa14.31□□□□□ -0.12
MBD3-209ENST00000592012 NDUFA7O95182 113 aa14.31□□□□□ -0.12
MBD3-209ENST00000592012 BEAN1Q3B7T3 259 aa14.31□□□□□ -0.12
MBD3-209ENST00000592012 Q6ZSN1 163 aa14.31□□□□□ -0.12
MBD3-209ENST00000592012 C1orf158Q8N1D5 194 aa14.31□□□□□ -0.12
MBD3-209ENST00000592012 C20orf203Q8NBC4 194 aa14.31□□□□□ -0.12
MBD3-209ENST00000592012 E9PLD3 99 aa14.3□□□□□ -0.12
MBD3-209ENST00000592012 SAP30O75446 220 aa14.3□□□□□ -0.12
MBD3-209ENST00000592012 AZU1P20160 251 aa14.3□□□□□ -0.12
MBD3-209ENST00000592012 OR11H2Q8NH07 326 aa14.3□□□□□ -0.12
MBD3-209ENST00000592012 C11orf86A6NJI1 115 aa14.3□□□□□ -0.12
MBD3-209ENST00000592012 Q9UF83 564 aa14.3□□□□□ -0.12
MBD3-209ENST00000592012 H3BRM9 83 aa14.29□□□□□ -0.12
MBD3-209ENST00000592012 EMP1P54849 157 aa14.29□□□□□ -0.12
MBD3-209ENST00000592012 PAPPA-AS1Q5QFB9 102 aa14.29□□□□□ -0.12
MBD3-209ENST00000592012 MRPL16Q9NX20 251 aaKnown RBP14.29□□□□□ -0.12
MBD3-209ENST00000592012 GCSHP23434 173 aa14.28□□□□□ -0.12
MBD3-209ENST00000592012 MYMXA0A1B0GTQ4 84 aa14.27□□□□□ -0.12
MBD3-209ENST00000592012 K7EP13 123 aa14.27□□□□□ -0.12
MBD3-209ENST00000592012 IGLV1-51P01701 117 aa14.27□□□□□ -0.12
MBD3-209ENST00000592012 FXYD2P54710 66 aa14.27□□□□□ -0.12
MBD3-209ENST00000592012 AMMECR1LQ6DCA0 310 aa14.27□□□□□ -0.12
MBD3-209ENST00000592012 OPRPNQ99935 248 aaPredicted RBP14.27□□□□□ -0.12
MBD3-209ENST00000592012 PRADC1Q9BSG0 188 aa14.27□□□□□ -0.12
MBD3-209ENST00000592012 TNFRSF18Q9Y5U5 241 aa14.27□□□□□ -0.12
MBD3-209ENST00000592012 TM2D2Q9BX73 214 aa14.27□□□□□ -0.13
MBD3-209ENST00000592012 IGHV3OR16-12A0A075B7B8 117 aa14.26□□□□□ -0.13
MBD3-209ENST00000592012 OTOGQ6ZRI0 2925 aa14.26□□□□□ -0.13
MBD3-209ENST00000592012 RHODO00212 210 aa14.26□□□□□ -0.13
MBD3-209ENST00000592012 ZNRF2Q8NHG8 242 aa14.26□□□□□ -0.13
MBD3-209ENST00000592012 C9orf118A6NHY6 69 aa14.25□□□□□ -0.13
MBD3-209ENST00000592012 RS1O15537 224 aa14.25□□□□□ -0.13
MBD3-209ENST00000592012 LY6G6DO95868 133 aa14.25□□□□□ -0.13
MBD3-209ENST00000592012 CMC4P56277 68 aaPredicted RBP14.25□□□□□ -0.13
MBD3-209ENST00000592012 CEND1Q8N111 149 aa14.25□□□□□ -0.13
MBD3-209ENST00000592012 IGHV3-53P01767 116 aa14.25□□□□□ -0.13
MBD3-209ENST00000592012 IL17DQ8TAD2 202 aa14.24□□□□□ -0.13
MBD3-209ENST00000592012 RNASE8Q8TDE3 154 aaKnown RBP14.24□□□□□ -0.13
MBD3-209ENST00000592012 C19orf73Q9NVV2 129 aa14.24□□□□□ -0.13
MBD3-209ENST00000592012 GIG44P09565 113 aaPredicted RBP14.23□□□□□ -0.13
MBD3-209ENST00000592012 TAL2Q16559 108 aa14.23□□□□□ -0.13
MBD3-209ENST00000592012 FAM110AQ9BQ89 295 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms