RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 BDP1A6H8Y1 2624 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 TRAV7A0A075B6U4 112 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 IGHV3OR16-13A0A075B7E8 117 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 IGHV6-1A0A0B4J1U7 121 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 IGKV1-9A0A0C4DH69 117 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 TRBV10-3A0A0K0K1G6 114 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 A0A1W2PQD3 144 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 SMIM27A0A1W2PRY6 76 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 SH2D1AO60880 128 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 FSTL3O95633 263 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 LTAP01374 205 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 IFI6P09912 130 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 XCL1P47992 114 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 FXYD7P58549 80 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 LINC00313P59037 77 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 PRR3P79522 188 aaKnown RBP2.36□□□□□ -2.03
VMP1-212ENST00000591782 C14orf178Q8N769 122 aaPredicted RBP2.36□□□□□ -2.03
VMP1-212ENST00000591782 C16orf74Q96GX8 76 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 LINC00467Q9BRT7 94 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 CYP4F30PQ9H0H9 118 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 TP73-AS1Q9UF72 201 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 PRO1854Q9UHT4 67 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 NACAE9PAV3 2078 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 KMT2BQ9UMN6 2715 aaPredicted RBP2.36□□□□□ -2.03
VMP1-212ENST00000591782 SNRNP200O75643 2136 aaKnown RBP2.36□□□□□ -2.03
VMP1-212ENST00000591782 LRP4O75096 1905 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 MYO9BQ13459 2157 aa2.36□□□□□ -2.03
VMP1-212ENST00000591782 MUC6Q6W4X9 2439 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 IGKV1D-43A0A0B4J1Z2 117 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 C19orf71A6NCJ1 209 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 ZNF815PA8K554 130 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 IQCF6A8MYZ5 107 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 E7EQL1 145 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 J3QRE1 110 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 PPP1R17O96001 155 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 CCL4P13236 92 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 RPL27AP46776 148 aaKnown RBP2.35□□□□□ -2.03
VMP1-212ENST00000591782 UBE2D1P51668 147 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 IL17AQ16552 155 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 CXCL17Q6UXB2 119 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 ZNF818PQ6ZRF7 136 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 VMO1Q7Z5L0 202 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 GPHB5Q86YW7 130 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 C20orf197Q8N268 126 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 Q8N2B8 174 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 C6orf223Q8N319 242 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 WFDC5Q8TCV5 224 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 LINC00597Q9H2U6 94 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 TMEM167BQ9NRX6 74 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 PHLDA3Q9Y5J5 127 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 V9GYV3 84 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 PCDH15Q96QU1 1955 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 TTC28Q96AY4 2481 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 LTBP2Q14767 1821 aa2.35□□□□□ -2.03
VMP1-212ENST00000591782 ANKRD11Q6UB99 2663 aaPredicted RBP2.35□□□□□ -2.03
VMP1-212ENST00000591782 ASH1LQ9NR48 2969 aaKnown RBP2.34□□□□□ -2.03
VMP1-212ENST00000591782 MAST4O15021 2626 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 TRBV7-3A0A075B6L6 115 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 IGHV1-45A0A0A0MS14 117 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 TRBV7-1A0A0A6YYK4 115 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 TRBV30A0A0K0K1B3 111 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 TEX49A0A1B0GTD5 131 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 H7BZZ5 65 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 ERC2-IT1O76042 136 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 RNASE4P34096 147 aaKnown RBP2.34□□□□□ -2.03
VMP1-212ENST00000591782 ZNF138P52744 262 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 FGF12P61328 243 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 CEMP1Q6PRD7 247 aaPredicted RBP2.34□□□□□ -2.03
VMP1-212ENST00000591782 SOSTDC1Q6X4U4 206 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 TMEM141Q96I45 108 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 PLA2G12AQ9BZM1 189 aa2.34□□□□□ -2.03
VMP1-212ENST00000591782 WDFY4Q6ZS81 3184 aa2.34□□□□□ -2.04
VMP1-212ENST00000591782 DCHS1Q96JQ0 3298 aa2.34□□□□□ -2.04
VMP1-212ENST00000591782 GPR179Q6PRD1 2367 aa2.34□□□□□ -2.04
VMP1-212ENST00000591782 DNAH12Q6ZR08 3092 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 CHD6Q8TD26 2715 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 A0A0G2JRQ6 117 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 F8WEM9 126 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 C3orf84H3BNL1 204 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 EDDM3BP56851 147 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 SUPT4H1P63272 117 aaKnown RBP2.33□□□□□ -2.04
VMP1-212ENST00000591782 EIF4EBP1Q13541 118 aaPredicted RBP2.33□□□□□ -2.04
VMP1-212ENST00000591782 CASC2Q6XLA1 102 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 PRNTQ86SH4 94 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 ORMDL3Q8N138 153 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 LINC00269Q8N2A0 174 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 LINC00337Q8N6G1 96 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 LINC01555Q8NAE3 123 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 CHCHD10Q8WYQ3 142 aaPredicted RBP2.33□□□□□ -2.04
VMP1-212ENST00000591782 IMMP1LQ96LU5 166 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 LINC00167Q96N53 147 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 NABP2Q9BQ15 211 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 ZNF292O60281 2723 aa2.33□□□□□ -2.04
VMP1-212ENST00000591782 IGHV1OR15-9A0A0B4J2B8 117 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 TMEM223A0PJW6 202 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 TMEM30CPA0ZSE6 113 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 LEPROTO15243 131 aa2.32□□□□□ -2.04
VMP1-212ENST00000591782 ZNF32P17041 273 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms