RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 Q6ZSN1 163 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 ZFP82Q8N141 532 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 OCC1Q8TAD7 63 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 FAM210AQ96ND0 272 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 PLA2G2DQ9UNK4 145 aa6.94□□□□□ -1.3
VPS4B-207ENST00000591519 HERC1Q15751 4861 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 IGLV5-52A0A0A0MRZ9 124 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 C19orf71A6NCJ1 209 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 A8MWV9 139 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 K7EN84 100 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 LAGE3Q14657 143 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 OR10J3Q5JRS4 329 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 Q8N814 137 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 ATP6V0E2Q8NHE4 81 aa6.93□□□□□ -1.3
VPS4B-207ENST00000591519 RNASE7Q9H1E1 156 aaKnown RBP6.93□□□□□ -1.3
VPS4B-207ENST00000591519 DMBT1Q9UGM3 2413 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-207ENST00000591519 TMEM250H0YL14 139 aa6.92□□□□□ -1.3
VPS4B-207ENST00000591519 SMR3BP02814 79 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-207ENST00000591519 SRP19P09132 144 aaKnown RBP6.92□□□□□ -1.3
VPS4B-207ENST00000591519 ZFP2Q6ZN57 461 aa6.92□□□□□ -1.3
VPS4B-207ENST00000591519 C14orf178Q8N769 122 aaPredicted RBP6.92□□□□□ -1.3
VPS4B-207ENST00000591519 NUDT10Q8NFP7 164 aa6.92□□□□□ -1.3
VPS4B-207ENST00000591519 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
VPS4B-207ENST00000591519 SMIM7Q9BQ49 75 aa6.92□□□□□ -1.3
VPS4B-207ENST00000591519 BIN3Q9NQY0 253 aa6.92□□□□□ -1.3
VPS4B-207ENST00000591519 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
VPS4B-207ENST00000591519 GAGE12JA6NER3 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 CXCL1P09341 107 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 LINC00694P0DN24 101 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 RPS20P60866 119 aaKnown RBP6.91□□□□□ -1.3
VPS4B-207ENST00000591519 GAGE1Q13065 139 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 GAGE4Q13068 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 GAGE5Q13069 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 GAGE13Q4V321 117 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 UFSP1Q6NVU6 142 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 FER1L6-AS1Q8NA97 138 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 SMIM12Q96EX1 92 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 SFRP2Q96HF1 295 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 TM2D2Q9BX73 214 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 Q9UF83 564 aa6.91□□□□□ -1.3
VPS4B-207ENST00000591519 ZNF727A8MUV8 499 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 C9JQL5 133 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 RHODO00212 210 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 SNAI2O43623 268 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 OR5AL1P0C617 328 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 ZNF56Q15929 161 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 RPP21Q9H633 154 aaKnown RBP6.9□□□□□ -1.3
VPS4B-207ENST00000591519 Q9HAA7 133 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
VPS4B-207ENST00000591519 FLG2Q5D862 2391 aaPredicted RBP6.9□□□□□ -1.31
VPS4B-207ENST00000591519 A0A087WWC5 75 aa6.89□□□□□ -1.31
VPS4B-207ENST00000591519 TRAV8-3A0A0A6YYJ7 113 aa6.89□□□□□ -1.31
VPS4B-207ENST00000591519 XKRY2A2RUG3 117 aa6.89□□□□□ -1.31
VPS4B-207ENST00000591519 F5H697 171 aa6.89□□□□□ -1.31
VPS4B-207ENST00000591519 GATCO43716 136 aaKnown RBP6.89□□□□□ -1.31
VPS4B-207ENST00000591519 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
VPS4B-207ENST00000591519 LYZL1Q6UWQ5 148 aa6.89□□□□□ -1.31
VPS4B-207ENST00000591519 Q6ZSA8 131 aa6.89□□□□□ -1.31
VPS4B-207ENST00000591519 VPS13BQ7Z7G8 4022 aa6.89□□□□□ -1.31
VPS4B-207ENST00000591519 MGPP08493 103 aa6.88□□□□□ -1.31
VPS4B-207ENST00000591519 IGLC6P0CF74 106 aa6.88□□□□□ -1.31
VPS4B-207ENST00000591519 SMIM17P0DL12 118 aa6.88□□□□□ -1.31
VPS4B-207ENST00000591519 PEA15Q15121 130 aa6.88□□□□□ -1.31
VPS4B-207ENST00000591519 RAB14P61106 215 aa6.87□□□□□ -1.31
VPS4B-207ENST00000591519 CACNG7P62955 275 aa6.87□□□□□ -1.31
VPS4B-207ENST00000591519 HAMPP81172 84 aa6.87□□□□□ -1.31
VPS4B-207ENST00000591519 WFDC2Q14508 124 aa6.87□□□□□ -1.31
VPS4B-207ENST00000591519 LINC01551Q86U37 167 aa6.87□□□□□ -1.31
VPS4B-207ENST00000591519 AP1S3Q96PC3 154 aa6.87□□□□□ -1.31
VPS4B-207ENST00000591519 COX11Q9Y6N1 276 aa6.87□□□□□ -1.31
VPS4B-207ENST00000591519 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
VPS4B-207ENST00000591519 NTF3P20783 257 aa6.86□□□□□ -1.31
VPS4B-207ENST00000591519 ADIRFQ15847 76 aa6.86□□□□□ -1.31
VPS4B-207ENST00000591519 TMEM241Q24JQ0 296 aa6.86□□□□□ -1.31
VPS4B-207ENST00000591519 DAZ4Q86SG3 579 aaKnown RBP6.86□□□□□ -1.31
VPS4B-207ENST00000591519 PGLYRP4Q96LB8 373 aa6.86□□□□□ -1.31
VPS4B-207ENST00000591519 DAZ3Q9NR90 486 aaKnown RBP6.86□□□□□ -1.31
VPS4B-207ENST00000591519 A8MWL6 223 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 F2Z2F3 143 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 RAB4BP61018 213 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
VPS4B-207ENST00000591519 IFITM2Q01629 132 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 TWIST1Q15672 202 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 FAM231DQ6ZW35 169 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 NIT1Q86X76 327 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 NEXN-AS1Q8NBZ9 246 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 GTSF1Q8WW33 167 aa6.85□□□□□ -1.31
VPS4B-207ENST00000591519 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
VPS4B-207ENST00000591519 CTRLP40313 264 aa6.84□□□□□ -1.31
VPS4B-207ENST00000591519 RPL36AP83881 106 aaKnown RBP6.84□□□□□ -1.31
VPS4B-207ENST00000591519 Q8N976 141 aa6.84□□□□□ -1.31
VPS4B-207ENST00000591519 RPL36ALQ969Q0 106 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms