RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 GAGE12JA6NER3 117 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 HLA-DQA1P01909 254 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 SRIP30626 198 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 TCTAP57738 103 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 RPL36AP83881 106 aaKnown RBP15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 GAGE1Q13065 139 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 GAGE4Q13068 117 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 GAGE5Q13069 117 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 GAGE13Q4V321 117 aa15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 RPL36ALQ969Q0 106 aaKnown RBP15.24■□□□□ 0.03
CROCCP3-206ENST00000591348 A0A096LPF7 62 aa15.23■□□□□ 0.03
CROCCP3-206ENST00000591348 NEXN-AS1Q8NBZ9 246 aa15.23■□□□□ 0.03
CROCCP3-206ENST00000591348 CKS2P33552 79 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 ZNRF2Q8NHG8 242 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 NIT2Q9NQR4 276 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 APLNQ9ULZ1 77 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 PLECQ15149 4684 aaKnown RBP15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 TRBV7-3A0A075B6L6 115 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 NCR2O95944 276 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 MT-ND6P03923 174 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 TNFRSF18Q9Y5U5 241 aa15.22■□□□□ 0.03
CROCCP3-206ENST00000591348 TENM2Q9NT68 2774 aa15.21■□□□□ 0.03
CROCCP3-206ENST00000591348 SMKR1H3BMG3 65 aa15.21■□□□□ 0.03
CROCCP3-206ENST00000591348 RPL39LQ96EH5 51 aaKnown RBP15.21■□□□□ 0.03
CROCCP3-206ENST00000591348 DNAJC30Q96LL9 226 aa15.21■□□□□ 0.03
CROCCP3-206ENST00000591348 D6R8Y8 96 aa15.2■□□□□ 0.02
CROCCP3-206ENST00000591348 GAS8-AS1O95177 125 aa15.2■□□□□ 0.02
CROCCP3-206ENST00000591348 OR10J3Q5JRS4 329 aa15.2■□□□□ 0.02
CROCCP3-206ENST00000591348 NEGR1Q7Z3B1 354 aa15.2■□□□□ 0.02
CROCCP3-206ENST00000591348 SH2D6Q7Z4S9 175 aa15.2■□□□□ 0.02
CROCCP3-206ENST00000591348 APCSP02743 223 aa15.19■□□□□ 0.02
CROCCP3-206ENST00000591348 PPBPP02775 128 aa15.19■□□□□ 0.02
CROCCP3-206ENST00000591348 LINC00694P0DN24 101 aa15.19■□□□□ 0.02
CROCCP3-206ENST00000591348 ORMDL3Q8N138 153 aa15.19■□□□□ 0.02
CROCCP3-206ENST00000591348 PPP1R17O96001 155 aa15.18■□□□□ 0.02
CROCCP3-206ENST00000591348 RPS10P46783 165 aaKnown RBP15.18■□□□□ 0.02
CROCCP3-206ENST00000591348 ATP6V0E2Q8NHE4 81 aa15.18■□□□□ 0.02
CROCCP3-206ENST00000591348 MRPL18Q9H0U6 180 aaKnown RBP15.18■□□□□ 0.02
CROCCP3-206ENST00000591348 UBE2D3P61077 147 aa15.17■□□□□ 0.02
CROCCP3-206ENST00000591348 UBE2D2P62837 147 aa15.17■□□□□ 0.02
CROCCP3-206ENST00000591348 TRAPPC1Q9Y5R8 145 aa15.17■□□□□ 0.02
CROCCP3-206ENST00000591348 FABP9Q0Z7S8 132 aa15.16■□□□□ 0.02
CROCCP3-206ENST00000591348 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.16■□□□□ 0.02
CROCCP3-206ENST00000591348 KIAA1644Q3SXP7 199 aa15.16■□□□□ 0.02
CROCCP3-206ENST00000591348 NRACQ8N912 160 aa15.16■□□□□ 0.02
CROCCP3-206ENST00000591348 ST20Q9HBF5 79 aa15.16■□□□□ 0.02
CROCCP3-206ENST00000591348 COLCA2A8K830 154 aa15.15■□□□□ 0.02
CROCCP3-206ENST00000591348 PRELID3AQ96N28 172 aa15.15■□□□□ 0.02
CROCCP3-206ENST00000591348 TRBV6-5A0A0K0K1A5 114 aa15.14■□□□□ 0.01
CROCCP3-206ENST00000591348 DAZ4Q86SG3 579 aaKnown RBP15.14■□□□□ 0.01
CROCCP3-206ENST00000591348 DAZ3Q9NR90 486 aaKnown RBP15.14■□□□□ 0.01
CROCCP3-206ENST00000591348 IGHV3-38A0A0C4DH36 116 aa15.13■□□□□ 0.01
CROCCP3-206ENST00000591348 SDHAF1A6NFY7 115 aa15.13■□□□□ 0.01
CROCCP3-206ENST00000591348 TNFRSF6BO95407 300 aa15.13■□□□□ 0.01
CROCCP3-206ENST00000591348 GTSF1LQ9H1H1 148 aa15.13■□□□□ 0.01
CROCCP3-206ENST00000591348 NPYP01303 97 aa15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 CCL18P55774 89 aa15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 LAMTOR2Q9Y2Q5 125 aa15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 PHOX2AO14813 284 aa15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 RAB5AP20339 215 aa15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 SUMO2P61956 95 aaKnown RBP15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 ESRGQ1W209 222 aa15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 LYPD5Q6UWN5 251 aa15.12■□□□□ 0.01
CROCCP3-206ENST00000591348 LYSTQ99698 3801 aa15.11■□□□□ 0.01
CROCCP3-206ENST00000591348 C20orf78Q9BR46 151 aa15.11■□□□□ 0.01
CROCCP3-206ENST00000591348 TMEM70Q9BUB7 260 aa15.11■□□□□ 0.01
CROCCP3-206ENST00000591348 UBE2DNLQ8IWF7 75 aa15.09■□□□□ 0.01
CROCCP3-206ENST00000591348 POLR2KP53803 58 aaKnown RBP15.09■□□□□ 0.01
CROCCP3-206ENST00000591348 TIRAPP58753 221 aa15.09■□□□□ 0.01
CROCCP3-206ENST00000591348 PMCHP20382 165 aa15.08■□□□□ 0
CROCCP3-206ENST00000591348 TMEM97Q5BJF2 176 aa15.07■□□□□ 0
CROCCP3-206ENST00000591348 ALKBH7Q9BT30 221 aaPredicted RBP15.07■□□□□ 0
CROCCP3-206ENST00000591348 MAP1LC3AQ9H492 121 aa15.07■□□□□ 0
CROCCP3-206ENST00000591348 LINC00588Q9Y4M8 146 aa15.07■□□□□ 0
CROCCP3-206ENST00000591348 TRBV27A0A0K0K1C4 114 aa15.06■□□□□ 0
CROCCP3-206ENST00000591348 I3L3M4 83 aa15.06■□□□□ 0
CROCCP3-206ENST00000591348 VCYO14598 125 aa15.06■□□□□ 0
CROCCP3-206ENST00000591348 COTL1Q14019 142 aa15.06■□□□□ 0
CROCCP3-206ENST00000591348 DEFB104AQ8WTQ1 72 aa15.06■□□□□ 0
CROCCP3-206ENST00000591348 TRGC2P03986 189 aa15.06■□□□□ 0
CROCCP3-206ENST00000591348 LELP1Q5T871 98 aa15.06■□□□□ 0
CROCCP3-206ENST00000591348 LOC389332A0A1B0GUA5 103 aa15.05■□□□□ -0
CROCCP3-206ENST00000591348 RPL32P62910 135 aaKnown RBP15.05■□□□□ -0
CROCCP3-206ENST00000591348 SMIM2Q9BVW6 85 aa15.05■□□□□ -0
CROCCP3-206ENST00000591348 MRPS16Q9Y3D3 137 aaKnown RBP15.05■□□□□ -0
CROCCP3-206ENST00000591348 TRBV6-8A0A0A6YYG3 113 aa15.04■□□□□ -0
CROCCP3-206ENST00000591348 LGALS9CQ6DKI2 356 aa15.04■□□□□ -0
CROCCP3-206ENST00000591348 KIR2DL4Q99706 377 aa15.04■□□□□ -0
CROCCP3-206ENST00000591348 PRSS47A8MTI9 375 aa15.03■□□□□ -0
CROCCP3-206ENST00000591348 NTM-AS1Q6ZSK4 140 aa15.03■□□□□ -0
CROCCP3-206ENST00000591348 TRBV25-1A0A075B6N4 114 aa15.02□□□□□ -0.01
CROCCP3-206ENST00000591348 TRAV8-6A0A0B4J262 113 aa15.02□□□□□ -0.01
CROCCP3-206ENST00000591348 FCER1GP30273 86 aa15.02□□□□□ -0.01
CROCCP3-206ENST00000591348 IGHV1-24A0A0C4DH33 117 aa15.01□□□□□ -0.01
CROCCP3-206ENST00000591348 LINC00476Q8WZB0 136 aa15.01□□□□□ -0.01
CROCCP3-206ENST00000591348 UPK3BQ9BT76 320 aa15.01□□□□□ -0.01
CROCCP3-206ENST00000591348 LY6G6CO95867 125 aa15□□□□□ -0.01
CROCCP3-206ENST00000591348 TSHBP01222 138 aa15□□□□□ -0.01
CROCCP3-206ENST00000591348 AMTP48728 403 aa15□□□□□ -0.01
CROCCP3-206ENST00000591348 NXT2Q9NPJ8 142 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 334.6 ms