RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 OR5AL1P0C617 328 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 SMIM17P0DL12 118 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 SSTP61278 116 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 ENHOQ6UWT2 76 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 TMUB2Q71RG4 321 aa11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 SSBP4Q9BWG4 385 aaPredicted RBP11.72□□□□□ -0.53
PRKCSH-211ENST00000590098 A0A0D9SG52 128 aa11.71□□□□□ -0.53
PRKCSH-211ENST00000590098 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.53
PRKCSH-211ENST00000590098 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.53
PRKCSH-211ENST00000590098 HMSDA8MTL9 139 aa11.7□□□□□ -0.54
PRKCSH-211ENST00000590098 KRTAP29-1A8MX34 341 aaPredicted RBP11.7□□□□□ -0.54
PRKCSH-211ENST00000590098 BCL2L11O43521 198 aa11.69□□□□□ -0.54
PRKCSH-211ENST00000590098 EIF5AP63241 154 aaKnown RBP11.69□□□□□ -0.54
PRKCSH-211ENST00000590098 CIRBP-AS1Q8TBR5 109 aa11.69□□□□□ -0.54
PRKCSH-211ENST00000590098 AP1S3Q96PC3 154 aa11.69□□□□□ -0.54
PRKCSH-211ENST00000590098 HLA-DQA1P01909 254 aa11.68□□□□□ -0.54
PRKCSH-211ENST00000590098 RPL35P42766 123 aaKnown RBP11.68□□□□□ -0.54
PRKCSH-211ENST00000590098 MIAQ16674 131 aa11.68□□□□□ -0.54
PRKCSH-211ENST00000590098 DERL1Q9BUN8 251 aa11.68□□□□□ -0.54
PRKCSH-211ENST00000590098 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
PRKCSH-211ENST00000590098 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
PRKCSH-211ENST00000590098 TPPP3Q9BW30 176 aa11.67□□□□□ -0.54
PRKCSH-211ENST00000590098 VAX2Q9UIW0 290 aa11.67□□□□□ -0.54
PRKCSH-211ENST00000590098 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
PRKCSH-211ENST00000590098 MANBALQ9NQG1 85 aa11.66□□□□□ -0.54
PRKCSH-211ENST00000590098 GNG13Q9P2W3 67 aa11.66□□□□□ -0.54
PRKCSH-211ENST00000590098 KIF25-AS1Q9Y6Z4 181 aa11.66□□□□□ -0.54
PRKCSH-211ENST00000590098 IGLV2-8P01709 118 aa11.65□□□□□ -0.54
PRKCSH-211ENST00000590098 GAGE6Q13070 117 aa11.65□□□□□ -0.54
PRKCSH-211ENST00000590098 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
PRKCSH-211ENST00000590098 MGPP08493 103 aa11.64□□□□□ -0.55
PRKCSH-211ENST00000590098 RPS20P60866 119 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-211ENST00000590098 RBX1P62877 108 aa11.64□□□□□ -0.55
PRKCSH-211ENST00000590098 CLPSL2Q6UWE3 100 aa11.64□□□□□ -0.55
PRKCSH-211ENST00000590098 LINC00269Q8N2A0 174 aa11.64□□□□□ -0.55
PRKCSH-211ENST00000590098 PRR34Q9NV39 138 aa11.64□□□□□ -0.55
PRKCSH-211ENST00000590098 LRP1Q07954 4544 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-211ENST00000590098 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 H7C1H1 209 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 GZMBP10144 247 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 KRTAP10-4P60372 401 aaPredicted RBP11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 CCL20P78556 96 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 CENPWQ5EE01 88 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 C11orf52Q96A22 123 aa11.63□□□□□ -0.55
PRKCSH-211ENST00000590098 TEX46H3BTG2 121 aa11.62□□□□□ -0.55
PRKCSH-211ENST00000590098 PRSS1P07477 247 aa11.62□□□□□ -0.55
PRKCSH-211ENST00000590098 CACNG7P62955 275 aa11.62□□□□□ -0.55
PRKCSH-211ENST00000590098 IQCJQ1A5X6 159 aa11.62□□□□□ -0.55
PRKCSH-211ENST00000590098 OR2D3Q8NGH3 330 aa11.62□□□□□ -0.55
PRKCSH-211ENST00000590098 FAT3Q8TDW7 4589 aa11.62□□□□□ -0.55
PRKCSH-211ENST00000590098 XKRY2A2RUG3 117 aa11.61□□□□□ -0.55
PRKCSH-211ENST00000590098 M0QY20 66 aa11.61□□□□□ -0.55
PRKCSH-211ENST00000590098 PKHD1L1Q86WI1 4243 aa11.61□□□□□ -0.55
PRKCSH-211ENST00000590098 TRAV1-1A0A0B4J248 108 aa11.6□□□□□ -0.55
PRKCSH-211ENST00000590098 IGLC6P0CF74 106 aa11.6□□□□□ -0.55
PRKCSH-211ENST00000590098 GNG4P50150 75 aa11.6□□□□□ -0.55
PRKCSH-211ENST00000590098 RAB5CP51148 216 aa11.6□□□□□ -0.55
PRKCSH-211ENST00000590098 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
PRKCSH-211ENST00000590098 EIF5AL1Q6IS14 154 aaKnown RBP11.6□□□□□ -0.55
PRKCSH-211ENST00000590098 F2Z2F3 143 aa11.59□□□□□ -0.55
PRKCSH-211ENST00000590098 OXTP01178 125 aa11.59□□□□□ -0.55
PRKCSH-211ENST00000590098 REG3AQ06141 175 aa11.59□□□□□ -0.55
PRKCSH-211ENST00000590098 C9orf163Q8N9P6 203 aa11.59□□□□□ -0.55
PRKCSH-211ENST00000590098 SMIM12Q96EX1 92 aa11.59□□□□□ -0.55
PRKCSH-211ENST00000590098 RAB19A4D1S5 217 aa11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 C19orf71A6NCJ1 209 aa11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 P01737 135 aa11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 NKX2-5P52952 324 aaPredicted RBP11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 RPL37AP61513 92 aaKnown RBP11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 KRTAP26-1Q6PEX3 210 aa11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 RASL11AQ6T310 242 aa11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 CLRN3Q8NCR9 226 aa11.58□□□□□ -0.56
PRKCSH-211ENST00000590098 IGLV10-54A0A075B6I4 117 aa11.57□□□□□ -0.56
PRKCSH-211ENST00000590098 PDE6DO43924 150 aa11.57□□□□□ -0.56
PRKCSH-211ENST00000590098 IFNA1P01562 189 aa11.57□□□□□ -0.56
PRKCSH-211ENST00000590098 TRGC1P0CF51 173 aa11.57□□□□□ -0.56
PRKCSH-211ENST00000590098 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
PRKCSH-211ENST00000590098 TMEM243Q9BU79 118 aa11.57□□□□□ -0.56
PRKCSH-211ENST00000590098 BIN3Q9NQY0 253 aa11.57□□□□□ -0.56
PRKCSH-211ENST00000590098 TRAV8-4A0A0B4J246 113 aa11.56□□□□□ -0.56
PRKCSH-211ENST00000590098 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
PRKCSH-211ENST00000590098 LYZL1Q6UWQ5 148 aa11.56□□□□□ -0.56
PRKCSH-211ENST00000590098 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
PRKCSH-211ENST00000590098 C20orf203Q8NBC4 194 aa11.55□□□□□ -0.56
PRKCSH-211ENST00000590098 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
PRKCSH-211ENST00000590098 NIT2Q9NQR4 276 aa11.55□□□□□ -0.56
PRKCSH-211ENST00000590098 A0A1B0GUV1 79 aa11.54□□□□□ -0.56
PRKCSH-211ENST00000590098 hDV102S1A0JD36 115 aa11.54□□□□□ -0.56
PRKCSH-211ENST00000590098 UBE2L6O14933 153 aa11.54□□□□□ -0.56
PRKCSH-211ENST00000590098 NTF3P20783 257 aa11.54□□□□□ -0.56
PRKCSH-211ENST00000590098 SULT1A2P50226 295 aa11.54□□□□□ -0.56
PRKCSH-211ENST00000590098 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
PRKCSH-211ENST00000590098 HMCN2Q8NDA2 5059 aa11.53□□□□□ -0.56
PRKCSH-211ENST00000590098 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
PRKCSH-211ENST00000590098 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
PRKCSH-211ENST00000590098 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
PRKCSH-211ENST00000590098 IGLV4-60A0A075B6I1 120 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms