RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 UBE2G1P62253 170 aa6.72□□□□□ -1.33
RETREG3-209ENST00000590035 MBD3L1Q8WWY6 194 aa6.72□□□□□ -1.33
RETREG3-209ENST00000590035 BATF3Q9NR55 127 aa6.72□□□□□ -1.33
RETREG3-209ENST00000590035 AKR1C3P42330 323 aa6.71□□□□□ -1.34
RETREG3-209ENST00000590035 RPL19P84098 196 aaKnown RBP6.71□□□□□ -1.34
RETREG3-209ENST00000590035 USP17L23D6RBM5 183 aa6.7□□□□□ -1.34
RETREG3-209ENST00000590035 PAGE4O60829 102 aa6.7□□□□□ -1.34
RETREG3-209ENST00000590035 S100A9P06702 114 aaKnown RBP6.7□□□□□ -1.34
RETREG3-209ENST00000590035 PRSS1P07477 247 aa6.7□□□□□ -1.34
RETREG3-209ENST00000590035 HNRNPA3P51991 378 aaKnown RBP6.7□□□□□ -1.34
RETREG3-209ENST00000590035 C14orf177Q52M58 125 aa6.7□□□□□ -1.34
RETREG3-209ENST00000590035 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
RETREG3-209ENST00000590035 C9orf163Q8N9P6 203 aa6.7□□□□□ -1.34
RETREG3-209ENST00000590035 C1orf43Q9BWL3 253 aa6.7□□□□□ -1.34
RETREG3-209ENST00000590035 PANO1I0J062 215 aa6.69□□□□□ -1.34
RETREG3-209ENST00000590035 ARPC5O15511 151 aa6.69□□□□□ -1.34
RETREG3-209ENST00000590035 CIRBPQ14011 172 aaKnown RBP6.69□□□□□ -1.34
RETREG3-209ENST00000590035 ZNF345Q14585 488 aa6.69□□□□□ -1.34
RETREG3-209ENST00000590035 MIAQ16674 131 aa6.69□□□□□ -1.34
RETREG3-209ENST00000590035 CST9LP1Q5W188 147 aa6.69□□□□□ -1.34
RETREG3-209ENST00000590035 KCNRGQ8N5I3 272 aa6.69□□□□□ -1.34
RETREG3-209ENST00000590035 C15orf54Q8N8G6 183 aa6.69□□□□□ -1.34
RETREG3-209ENST00000590035 DAZAP1Q96EP5 407 aaKnown RBP6.69□□□□□ -1.34
RETREG3-209ENST00000590035 TNXBP22105 4242 aa6.68□□□□□ -1.34
RETREG3-209ENST00000590035 PKIAP61925 76 aa6.68□□□□□ -1.34
RETREG3-209ENST00000590035 RBX1P62877 108 aa6.68□□□□□ -1.34
RETREG3-209ENST00000590035 IQCJQ1A5X6 159 aa6.68□□□□□ -1.34
RETREG3-209ENST00000590035 DGAT2L7PQ6IED9 249 aa6.68□□□□□ -1.34
RETREG3-209ENST00000590035 STOML3Q8TAV4 291 aa6.68□□□□□ -1.34
RETREG3-209ENST00000590035 ZNF471Q9BX82 626 aaPredicted RBP6.68□□□□□ -1.34
RETREG3-209ENST00000590035 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
RETREG3-209ENST00000590035 UMAD1C9J7I0 102 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 ANGP03950 147 aaKnown RBP6.67□□□□□ -1.34
RETREG3-209ENST00000590035 IGLC6P0CF74 106 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 ZNF56Q15929 161 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 TMEM97Q5BJF2 176 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 SDIM1Q6ZPB5 146 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 BAGE2Q86Y30 109 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 C11orf52Q96A22 123 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 LRP2P98164 4655 aa6.67□□□□□ -1.34
RETREG3-209ENST00000590035 MUC21A0A0G2JKD1 596 aa6.66□□□□□ -1.34
RETREG3-209ENST00000590035 MUC21A0A140T8X8 626 aa6.66□□□□□ -1.34
RETREG3-209ENST00000590035 TMEM262E9PQX1 116 aa6.66□□□□□ -1.34
RETREG3-209ENST00000590035 M0QY20 66 aa6.66□□□□□ -1.34
RETREG3-209ENST00000590035 CRPP02741 224 aa6.66□□□□□ -1.34
RETREG3-209ENST00000590035 CNBPP62633 177 aaKnown RBP6.66□□□□□ -1.34
RETREG3-209ENST00000590035 SFT2D1Q8WV19 159 aa6.66□□□□□ -1.34
RETREG3-209ENST00000590035 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
RETREG3-209ENST00000590035 C19orf71A6NCJ1 209 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 HMSDA8MTL9 139 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 SMLR1H3BR10 107 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 RPL37AP61513 92 aaKnown RBP6.65□□□□□ -1.34
RETREG3-209ENST00000590035 SPANXN1Q5VSR9 72 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 TMUB2Q71RG4 321 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 C20orf203Q8NBC4 194 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 FAM213BQ8TBF2 198 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 AP1S3Q96PC3 154 aa6.65□□□□□ -1.34
RETREG3-209ENST00000590035 TRAV1-1A0A0B4J248 108 aa6.64□□□□□ -1.35
RETREG3-209ENST00000590035 A0A1B0GUV1 79 aa6.64□□□□□ -1.35
RETREG3-209ENST00000590035 HLA-DQA1P01909 254 aa6.64□□□□□ -1.35
RETREG3-209ENST00000590035 SLPIP03973 132 aa6.64□□□□□ -1.35
RETREG3-209ENST00000590035 RPL35P42766 123 aaKnown RBP6.64□□□□□ -1.35
RETREG3-209ENST00000590035 DERL1Q9BUN8 251 aa6.64□□□□□ -1.35
RETREG3-209ENST00000590035 GFRA4Q9GZZ7 299 aa6.64□□□□□ -1.35
RETREG3-209ENST00000590035 TRBV25-1A0A075B6N4 114 aa6.63□□□□□ -1.35
RETREG3-209ENST00000590035 BCL2L11O43521 198 aa6.63□□□□□ -1.35
RETREG3-209ENST00000590035 CCL20P78556 96 aa6.63□□□□□ -1.35
RETREG3-209ENST00000590035 GAGE6Q13070 117 aa6.63□□□□□ -1.35
RETREG3-209ENST00000590035 SUMO4Q6EEV6 95 aa6.63□□□□□ -1.35
RETREG3-209ENST00000590035 CLRN3Q8NCR9 226 aa6.63□□□□□ -1.35
RETREG3-209ENST00000590035 TRBV20OR9-2A0A075B6H5 130 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 IGLV4-60A0A075B6I1 120 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 IGHV1-24A0A0C4DH33 117 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 PFDN1O60925 122 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 REG3AQ06141 175 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 RGS21Q2M5E4 152 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 CLPSL2Q6UWE3 100 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.62□□□□□ -1.35
RETREG3-209ENST00000590035 SMIM12Q96EX1 92 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 PGLYRP4Q96LB8 373 aa6.62□□□□□ -1.35
RETREG3-209ENST00000590035 TRAV8-4A0A0B4J246 113 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 A0A0D9SG52 128 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 A0A1B0GV50 99 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 F5H697 171 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 P01737 135 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 GZMBP10144 247 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 FER1L6-AS1Q8NA97 138 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 CNFNQ9BYD5 112 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 MANBALQ9NQG1 85 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
RETREG3-209ENST00000590035 SMIM17P0DL12 118 aa6.6□□□□□ -1.35
RETREG3-209ENST00000590035 RPS20P60866 119 aaKnown RBP6.6□□□□□ -1.35
RETREG3-209ENST00000590035 CACNG7P62955 275 aa6.6□□□□□ -1.35
RETREG3-209ENST00000590035 CENPWQ5EE01 88 aa6.6□□□□□ -1.35
RETREG3-209ENST00000590035 Q6ZRU5 148 aa6.6□□□□□ -1.35
RETREG3-209ENST00000590035 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
RETREG3-209ENST00000590035 IGLV10-54A0A075B6I4 117 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms