RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 PARLQ9H300 379 aa8.2□□□□□ -1.1
PRKCSH-210ENST00000589990 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
PRKCSH-210ENST00000589990 LPAP08519 4548 aa8.2□□□□□ -1.1
PRKCSH-210ENST00000589990 TRBV20OR9-2A0A075B6H5 130 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 IGKV3D-20A0A0C4DH25 116 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 GRIFINA4D1Z8 144 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 NDUFS6O75380 124 aaKnown RBP8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 GAS8-AS1O95177 125 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 S100A4P26447 101 aaKnown RBP8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 CLLU1Q5K131 121 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 SMIM7Q9BQ49 75 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 BIN3Q9NQY0 253 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 COX11Q9Y6N1 276 aa8.19□□□□□ -1.1
PRKCSH-210ENST00000589990 ZNF727A8MUV8 499 aa8.18□□□□□ -1.1
PRKCSH-210ENST00000589990 C9JQL5 133 aa8.18□□□□□ -1.1
PRKCSH-210ENST00000589990 UBE2WQ96B02 151 aa8.18□□□□□ -1.1
PRKCSH-210ENST00000589990 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
PRKCSH-210ENST00000589990 SAMD10Q9BYL1 202 aa8.18□□□□□ -1.1
PRKCSH-210ENST00000589990 SMDT1Q9H4I9 107 aa8.18□□□□□ -1.1
PRKCSH-210ENST00000589990 RPL19P84098 196 aaKnown RBP8.17□□□□□ -1.1
PRKCSH-210ENST00000589990 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
PRKCSH-210ENST00000589990 NIT1Q86X76 327 aa8.17□□□□□ -1.1
PRKCSH-210ENST00000589990 RMI2Q96E14 147 aa8.17□□□□□ -1.1
PRKCSH-210ENST00000589990 P01737 135 aa8.16□□□□□ -1.1
PRKCSH-210ENST00000589990 C14orf178Q8N769 122 aaPredicted RBP8.16□□□□□ -1.1
PRKCSH-210ENST00000589990 C9orf85Q96MD7 179 aa8.16□□□□□ -1.1
PRKCSH-210ENST00000589990 H3BVH4 76 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 K7EN84 100 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 PRSS1P07477 247 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 ARMS2P0C7Q2 107 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 RNASE3P12724 160 aaKnown RBP8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 TMEM241Q24JQ0 296 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 FAM74A3Q4VXF1 159 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 ATRAIDQ6UW56 229 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 NUDT10Q8NFP7 164 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 OR2D3Q8NGH3 330 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 NUDT11Q96G61 164 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 JPT2Q9H910 190 aa8.15□□□□□ -1.1
PRKCSH-210ENST00000589990 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
PRKCSH-210ENST00000589990 DNLZQ5SXM8 178 aa8.14□□□□□ -1.11
PRKCSH-210ENST00000589990 RNASE7Q9H1E1 156 aaKnown RBP8.14□□□□□ -1.11
PRKCSH-210ENST00000589990 IL36BQ9NZH7 164 aa8.14□□□□□ -1.11
PRKCSH-210ENST00000589990 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
PRKCSH-210ENST00000589990 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 GZMBP10144 247 aa8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 RPS20P60866 119 aaKnown RBP8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 ENHOQ6UWT2 76 aa8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 LINC01551Q86U37 167 aa8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 NAT8Q9UHE5 227 aa8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 URGCP-MRPS24S4R325 110 aa8.13□□□□□ -1.11
PRKCSH-210ENST00000589990 XKRY2A2RUG3 117 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 CIDEAO60543 219 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 SSTP61278 116 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 ADIRFQ15847 76 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 TPPP3Q9BW30 176 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
PRKCSH-210ENST00000589990 A0A087WWC5 75 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 MUC21A0A0G2JKD1 596 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 MUC21A0A140T8X8 626 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 M0R381 172 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 HLA-DQA1P01909 254 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 CXCL1P09341 107 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 RPL23P62829 140 aaKnown RBP8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 UFSP1Q6NVU6 142 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 PTH2Q96A98 100 aa8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 RPP21Q9H633 154 aaKnown RBP8.11□□□□□ -1.11
PRKCSH-210ENST00000589990 CHTF8P0CG12 524 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 C14orf177Q52M58 125 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 FAM231DQ6ZW35 169 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 COMMD7Q86VX2 200 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 C15orf54Q8N8G6 183 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 FER1L6-AS1Q8NA97 138 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 LINC01600Q96MT4 127 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 C1orf43Q9BWL3 253 aa8.1□□□□□ -1.11
PRKCSH-210ENST00000589990 A0A087WX48 190 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 A8MWV9 139 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 OR5AL1P0C617 328 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 UQCC3Q6UW78 93 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 ZFP2Q6ZN57 461 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 ZFP82Q8N141 532 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 OR10AG1Q8NH19 301 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 ISOC2Q96AB3 205 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 SSBP4Q9BWG4 385 aaPredicted RBP8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 OSTCQ9NRP0 149 aa8.09□□□□□ -1.11
PRKCSH-210ENST00000589990 LINC00862A6NCI5 91 aa8.08□□□□□ -1.12
PRKCSH-210ENST00000589990 A8MWL6 223 aa8.08□□□□□ -1.12
PRKCSH-210ENST00000589990 SNAI2O43623 268 aa8.08□□□□□ -1.12
PRKCSH-210ENST00000589990 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
PRKCSH-210ENST00000589990 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
PRKCSH-210ENST00000589990 LYZL1Q6UWQ5 148 aa8.08□□□□□ -1.12
PRKCSH-210ENST00000589990 MUC2Q02817 5179 aa8.07□□□□□ -1.12
PRKCSH-210ENST00000589990 A0A087WYN8 130 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms