RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 TNFSF18Q9UNG2 199 aa11.26□□□□□ -0.61
CXXC1-211ENST00000589548 TRBV6-1A0A0K0K1D8 114 aa11.25□□□□□ -0.61
CXXC1-211ENST00000589548 GAS8-AS1O95177 125 aa11.25□□□□□ -0.61
CXXC1-211ENST00000589548 PRR3P79522 188 aaKnown RBP11.25□□□□□ -0.61
CXXC1-211ENST00000589548 REG3AQ06141 175 aa11.25□□□□□ -0.61
CXXC1-211ENST00000589548 A0A0J9YXV3 536 aa11.24□□□□□ -0.61
CXXC1-211ENST00000589548 KRTAP10-8P60410 259 aa11.24□□□□□ -0.61
CXXC1-211ENST00000589548 C20orf203Q8NBC4 194 aa11.24□□□□□ -0.61
CXXC1-211ENST00000589548 C7orf33Q8WU49 177 aa11.24□□□□□ -0.61
CXXC1-211ENST00000589548 DERL1Q9BUN8 251 aa11.24□□□□□ -0.61
CXXC1-211ENST00000589548 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
CXXC1-211ENST00000589548 LPAP08519 4548 aa11.23□□□□□ -0.61
CXXC1-211ENST00000589548 TRBV25-1A0A075B6N4 114 aa11.23□□□□□ -0.61
CXXC1-211ENST00000589548 LTAP01374 205 aa11.23□□□□□ -0.61
CXXC1-211ENST00000589548 TMEM97Q5BJF2 176 aa11.23□□□□□ -0.61
CXXC1-211ENST00000589548 WDR73Q6P4I2 378 aa11.23□□□□□ -0.61
CXXC1-211ENST00000589548 FMC1Q96HJ9 113 aa11.23□□□□□ -0.61
CXXC1-211ENST00000589548 AP5S1Q9NUS5 200 aa11.23□□□□□ -0.61
CXXC1-211ENST00000589548 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
CXXC1-211ENST00000589548 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
CXXC1-211ENST00000589548 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
CXXC1-211ENST00000589548 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
CXXC1-211ENST00000589548 DEFA3P59666 94 aa11.22□□□□□ -0.61
CXXC1-211ENST00000589548 IQCJQ1A5X6 159 aa11.22□□□□□ -0.61
CXXC1-211ENST00000589548 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
CXXC1-211ENST00000589548 S100ZQ8WXG8 99 aa11.22□□□□□ -0.61
CXXC1-211ENST00000589548 AQP10Q96PS8 301 aa11.22□□□□□ -0.61
CXXC1-211ENST00000589548 RAB5CP51148 216 aa11.21□□□□□ -0.61
CXXC1-211ENST00000589548 UBE2G1P62253 170 aa11.21□□□□□ -0.61
CXXC1-211ENST00000589548 LINC00299Q6ZSB3 139 aa11.21□□□□□ -0.61
CXXC1-211ENST00000589548 ZNF471Q9BX82 626 aaPredicted RBP11.21□□□□□ -0.61
CXXC1-211ENST00000589548 IGLV4-60A0A075B6I1 120 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 F5H697 171 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 SNAI2O43623 268 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 P01737 135 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 COX6A2Q02221 97 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 C15orf56Q8N910 161 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 GTSF1Q8WW33 167 aa11.2□□□□□ -0.62
CXXC1-211ENST00000589548 NKX6-2Q9C056 277 aaPredicted RBP11.2□□□□□ -0.62
CXXC1-211ENST00000589548 IGHV1-24A0A0C4DH33 117 aa11.19□□□□□ -0.62
CXXC1-211ENST00000589548 SSBP4Q9BWG4 385 aaPredicted RBP11.19□□□□□ -0.62
CXXC1-211ENST00000589548 CXCL1P09341 107 aa11.18□□□□□ -0.62
CXXC1-211ENST00000589548 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
CXXC1-211ENST00000589548 RPL7L1Q6DKI1 246 aaKnown RBP11.18□□□□□ -0.62
CXXC1-211ENST00000589548 PRSS3P2Q8NHM4 247 aa11.18□□□□□ -0.62
CXXC1-211ENST00000589548 NDUFA13Q9P0J0 144 aa11.18□□□□□ -0.62
CXXC1-211ENST00000589548 IGKV2-24A0A0C4DH68 120 aa11.17□□□□□ -0.62
CXXC1-211ENST00000589548 INO80EQ8NBZ0 244 aaPredicted RBP11.17□□□□□ -0.62
CXXC1-211ENST00000589548 A0A1B0GUV1 79 aa11.16□□□□□ -0.62
CXXC1-211ENST00000589548 OR5AL1P0C617 328 aa11.16□□□□□ -0.62
CXXC1-211ENST00000589548 AKR1C3P42330 323 aa11.16□□□□□ -0.62
CXXC1-211ENST00000589548 SSTP61278 116 aa11.16□□□□□ -0.62
CXXC1-211ENST00000589548 SPANXN1Q5VSR9 72 aa11.16□□□□□ -0.62
CXXC1-211ENST00000589548 LYPD6BQ8NI32 183 aa11.16□□□□□ -0.62
CXXC1-211ENST00000589548 A6NHS1 94 aa11.15□□□□□ -0.62
CXXC1-211ENST00000589548 NDUFS6O75380 124 aaKnown RBP11.15□□□□□ -0.62
CXXC1-211ENST00000589548 GZMBP10144 247 aa11.15□□□□□ -0.62
CXXC1-211ENST00000589548 Q5BKY6 102 aa11.15□□□□□ -0.62
CXXC1-211ENST00000589548 STPG4Q8N801 248 aa11.15□□□□□ -0.62
CXXC1-211ENST00000589548 KRTAP9-2Q9BYQ4 174 aa11.15□□□□□ -0.62
CXXC1-211ENST00000589548 M0QY20 66 aa11.14□□□□□ -0.63
CXXC1-211ENST00000589548 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
CXXC1-211ENST00000589548 HIGD2BQ4VC39 106 aa11.14□□□□□ -0.63
CXXC1-211ENST00000589548 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
CXXC1-211ENST00000589548 TMEM243Q9BU79 118 aa11.14□□□□□ -0.63
CXXC1-211ENST00000589548 A0A096LNI7 61 aa11.13□□□□□ -0.63
CXXC1-211ENST00000589548 MAP1LC3B2A6NCE7 125 aa11.13□□□□□ -0.63
CXXC1-211ENST00000589548 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
CXXC1-211ENST00000589548 AP1S3Q96PC3 154 aa11.13□□□□□ -0.63
CXXC1-211ENST00000589548 MAP1LC3BQ9GZQ8 125 aa11.13□□□□□ -0.63
CXXC1-211ENST00000589548 GAGE12HA6NDE8 117 aa11.12□□□□□ -0.63
CXXC1-211ENST00000589548 FHITP49789 147 aa11.12□□□□□ -0.63
CXXC1-211ENST00000589548 SRSF9Q13242 221 aaKnown RBP eCLIP11.12□□□□□ -0.63
CXXC1-211ENST00000589548 CST9LP1Q5W188 147 aa11.12□□□□□ -0.63
CXXC1-211ENST00000589548 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
CXXC1-211ENST00000589548 TCEAL7Q9BRU2 100 aa11.12□□□□□ -0.63
CXXC1-211ENST00000589548 MLST8Q9BVC4 326 aa11.12□□□□□ -0.63
CXXC1-211ENST00000589548 ALG5Q9Y673 324 aa11.12□□□□□ -0.63
CXXC1-211ENST00000589548 MGPP08493 103 aa11.11□□□□□ -0.63
CXXC1-211ENST00000589548 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
CXXC1-211ENST00000589548 NKX2-5P52952 324 aaPredicted RBP11.1□□□□□ -0.63
CXXC1-211ENST00000589548 AKR1C8PQ5T2L2 129 aa11.1□□□□□ -0.63
CXXC1-211ENST00000589548 STOML3Q8TAV4 291 aa11.1□□□□□ -0.63
CXXC1-211ENST00000589548 BORCS7-ASMTA0A0B4J1R7 106 aa11.09□□□□□ -0.63
CXXC1-211ENST00000589548 SULT1A2P50226 295 aa11.09□□□□□ -0.63
CXXC1-211ENST00000589548 SCO2A0A1W2PP80 73 aa11.08□□□□□ -0.64
CXXC1-211ENST00000589548 PAGE4O60829 102 aa11.08□□□□□ -0.64
CXXC1-211ENST00000589548 CFAP161Q6P656 301 aa11.08□□□□□ -0.64
CXXC1-211ENST00000589548 GVQW2A0A096LPI5 108 aaPredicted RBP11.07□□□□□ -0.64
CXXC1-211ENST00000589548 IGKV3OR2-268A0A0C4DH90 116 aa11.07□□□□□ -0.64
CXXC1-211ENST00000589548 DEFA1P59665 94 aa11.07□□□□□ -0.64
CXXC1-211ENST00000589548 BAGE2Q86Y30 109 aa11.07□□□□□ -0.64
CXXC1-211ENST00000589548 PGLYRP4Q96LB8 373 aa11.07□□□□□ -0.64
CXXC1-211ENST00000589548 H7C1H1 209 aa11.06□□□□□ -0.64
CXXC1-211ENST00000589548 UBE2L6O14933 153 aa11.05□□□□□ -0.64
CXXC1-211ENST00000589548 S100A9P06702 114 aaKnown RBP11.05□□□□□ -0.64
CXXC1-211ENST00000589548 RASL11AQ6T310 242 aa11.05□□□□□ -0.64
CXXC1-211ENST00000589548 CHCHD10Q8WYQ3 142 aaPredicted RBP11.05□□□□□ -0.64
CXXC1-211ENST00000589548 FXYD6-FXYD2A0A087WZ82 144 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms