RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
VMP1-209ENST00000588915 AKR1C3P42330 323 aa8.99□□□□□ -0.97
VMP1-209ENST00000588915 CST9LP1Q5W188 147 aa8.99□□□□□ -0.97
VMP1-209ENST00000588915 KRTAP26-1Q6PEX3 210 aa8.99□□□□□ -0.97
VMP1-209ENST00000588915 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
VMP1-209ENST00000588915 Q6ZRU5 148 aa8.99□□□□□ -0.97
VMP1-209ENST00000588915 A0A0D9SG52 128 aa8.98□□□□□ -0.97
VMP1-209ENST00000588915 HNRNPA3P51991 378 aaKnown RBP8.98□□□□□ -0.97
VMP1-209ENST00000588915 NTM-AS1Q6ZSK4 140 aa8.98□□□□□ -0.97
VMP1-209ENST00000588915 OR10AG1Q8NH19 301 aa8.98□□□□□ -0.97
VMP1-209ENST00000588915 TRBV25-1A0A075B6N4 114 aa8.97□□□□□ -0.97
VMP1-209ENST00000588915 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
VMP1-209ENST00000588915 RBX1P62877 108 aa8.97□□□□□ -0.97
VMP1-209ENST00000588915 SPANXN1Q5VSR9 72 aa8.97□□□□□ -0.97
VMP1-209ENST00000588915 LINC00269Q8N2A0 174 aa8.97□□□□□ -0.97
VMP1-209ENST00000588915 MLST8Q9BVC4 326 aa8.97□□□□□ -0.97
VMP1-209ENST00000588915 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.97□□□□□ -0.97
VMP1-209ENST00000588915 FXYD6-FXYD2A0A087WZ82 144 aa8.96□□□□□ -0.98
VMP1-209ENST00000588915 TRAV8-4A0A0B4J246 113 aa8.96□□□□□ -0.98
VMP1-209ENST00000588915 F5H697 171 aa8.96□□□□□ -0.98
VMP1-209ENST00000588915 P01737 135 aa8.96□□□□□ -0.98
VMP1-209ENST00000588915 CIRBPQ14011 172 aaKnown RBP8.96□□□□□ -0.98
VMP1-209ENST00000588915 IQCJQ1A5X6 159 aa8.96□□□□□ -0.98
VMP1-209ENST00000588915 RNF185Q96GF1 192 aa8.96□□□□□ -0.98
VMP1-209ENST00000588915 DERL1Q9BUN8 251 aa8.96□□□□□ -0.98
VMP1-209ENST00000588915 SMIM17P0DL12 118 aa8.95□□□□□ -0.98
VMP1-209ENST00000588915 MT1HL1P0DM35 61 aa8.95□□□□□ -0.98
VMP1-209ENST00000588915 GZMBP10144 247 aa8.95□□□□□ -0.98
VMP1-209ENST00000588915 KIF25-AS1Q9Y6Z4 181 aa8.95□□□□□ -0.98
VMP1-209ENST00000588915 IGHV1-24A0A0C4DH33 117 aa8.94□□□□□ -0.98
VMP1-209ENST00000588915 PAGE4O60829 102 aa8.94□□□□□ -0.98
VMP1-209ENST00000588915 REG3AQ06141 175 aa8.94□□□□□ -0.98
VMP1-209ENST00000588915 GAGE6Q13070 117 aa8.94□□□□□ -0.98
VMP1-209ENST00000588915 BAGE2Q86Y30 109 aa8.94□□□□□ -0.98
VMP1-209ENST00000588915 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
VMP1-209ENST00000588915 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.93□□□□□ -0.98
VMP1-209ENST00000588915 A0A1B0GUV1 79 aa8.93□□□□□ -0.98
VMP1-209ENST00000588915 PANO1I0J062 215 aa8.93□□□□□ -0.98
VMP1-209ENST00000588915 MBD3L1Q8WWY6 194 aa8.93□□□□□ -0.98
VMP1-209ENST00000588915 AP1S3Q96PC3 154 aa8.93□□□□□ -0.98
VMP1-209ENST00000588915 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
VMP1-209ENST00000588915 H7C1H1 209 aa8.92□□□□□ -0.98
VMP1-209ENST00000588915 CLPSL2Q6UWE3 100 aa8.92□□□□□ -0.98
VMP1-209ENST00000588915 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
VMP1-209ENST00000588915 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
VMP1-209ENST00000588915 UMAD1C9J7I0 102 aa8.91□□□□□ -0.98
VMP1-209ENST00000588915 M0QY20 66 aa8.91□□□□□ -0.98
VMP1-209ENST00000588915 PFDN1O60925 122 aa8.91□□□□□ -0.98
VMP1-209ENST00000588915 TMUB2Q71RG4 321 aa8.91□□□□□ -0.98
VMP1-209ENST00000588915 SFT2D1Q8WV19 159 aa8.91□□□□□ -0.98
VMP1-209ENST00000588915 SCO2A0A1W2PP80 73 aa8.9□□□□□ -0.98
VMP1-209ENST00000588915 C20orf203Q8NBC4 194 aa8.9□□□□□ -0.98
VMP1-209ENST00000588915 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
VMP1-209ENST00000588915 IGLV10-54A0A075B6I4 117 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 A0A087WYN8 130 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 MUC21A0A0G2JKD1 596 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 MUC21A0A140T8X8 626 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 G3V3Q6 166 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 ARPC5O15511 151 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 PGLYRP4Q96LB8 373 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
VMP1-209ENST00000588915 SLPIP03973 132 aa8.88□□□□□ -0.99
VMP1-209ENST00000588915 RPS20P60866 119 aaKnown RBP8.88□□□□□ -0.99
VMP1-209ENST00000588915 CACNG7P62955 275 aa8.88□□□□□ -0.99
VMP1-209ENST00000588915 SPACA4Q8TDM5 124 aa8.88□□□□□ -0.99
VMP1-209ENST00000588915 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
VMP1-209ENST00000588915 IGLC6P0CF74 106 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 SSTP61278 116 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 ZNF345Q14585 488 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 CFAP161Q6P656 301 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 RASL11AQ6T310 242 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 KCNRGQ8N5I3 272 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 FAM213BQ8TBF2 198 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 BATF3Q9NR55 127 aa8.87□□□□□ -0.99
VMP1-209ENST00000588915 IGLV4-60A0A075B6I1 120 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 F2Z2F3 143 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 RPL35P42766 123 aaKnown RBP8.86□□□□□ -0.99
VMP1-209ENST00000588915 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 WDR73Q6P4I2 378 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 FER1L6-AS1Q8NA97 138 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 NIT2Q9NQR4 276 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 TNXBP22105 4242 aa8.86□□□□□ -0.99
VMP1-209ENST00000588915 MGPP08493 103 aa8.85□□□□□ -0.99
VMP1-209ENST00000588915 H2AFB1P0C5Y9 115 aa8.85□□□□□ -0.99
VMP1-209ENST00000588915 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
VMP1-209ENST00000588915 NKX2-5P52952 324 aaPredicted RBP8.85□□□□□ -0.99
VMP1-209ENST00000588915 SMIM12Q96EX1 92 aa8.85□□□□□ -0.99
VMP1-209ENST00000588915 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
VMP1-209ENST00000588915 UBE2L6O14933 153 aa8.84□□□□□ -0.99
VMP1-209ENST00000588915 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
VMP1-209ENST00000588915 GFRA4Q9GZZ7 299 aa8.84□□□□□ -0.99
VMP1-209ENST00000588915 DPH3P1Q9H4G8 78 aa8.84□□□□□ -0.99
VMP1-209ENST00000588915 LRP2P98164 4655 aa8.83□□□□□ -1
VMP1-209ENST00000588915 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
VMP1-209ENST00000588915 NDUFS6O75380 124 aaKnown RBP8.83□□□□□ -1
VMP1-209ENST00000588915 CHTF8P0CG12 524 aa8.83□□□□□ -1
VMP1-209ENST00000588915 RPS10P46783 165 aaKnown RBP8.83□□□□□ -1
VMP1-209ENST00000588915 EIF5AP63241 154 aaKnown RBP8.83□□□□□ -1
VMP1-209ENST00000588915 COTL1Q14019 142 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms