RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 BORCS7-ASMTA0A0B4J1R7 106 aa11.77□□□□□ -0.53
CCDC43-204ENST00000588687 G3V3Q6 166 aa11.77□□□□□ -0.53
CCDC43-204ENST00000588687 RBX1P62877 108 aa11.77□□□□□ -0.53
CCDC43-204ENST00000588687 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.53
CCDC43-204ENST00000588687 CHCHD5Q9BSY4 110 aa11.77□□□□□ -0.53
CCDC43-204ENST00000588687 SSBP4Q9BWG4 385 aaPredicted RBP11.77□□□□□ -0.53
CCDC43-204ENST00000588687 MED28Q9H204 178 aa11.77□□□□□ -0.53
CCDC43-204ENST00000588687 AKR1C8PQ5T2L2 129 aa11.76□□□□□ -0.53
CCDC43-204ENST00000588687 INO80EQ8NBZ0 244 aaPredicted RBP11.76□□□□□ -0.53
CCDC43-204ENST00000588687 MLST8Q9BVC4 326 aa11.76□□□□□ -0.53
CCDC43-204ENST00000588687 KIF25-AS1Q9Y6Z4 181 aa11.76□□□□□ -0.53
CCDC43-204ENST00000588687 FXYD6-FXYD2A0A087WZ82 144 aa11.75□□□□□ -0.53
CCDC43-204ENST00000588687 AKR1C3P42330 323 aa11.75□□□□□ -0.53
CCDC43-204ENST00000588687 PKIAP61925 76 aa11.75□□□□□ -0.53
CCDC43-204ENST00000588687 LINC00269Q8N2A0 174 aa11.75□□□□□ -0.53
CCDC43-204ENST00000588687 CYTL1Q9NRR1 136 aa11.75□□□□□ -0.53
CCDC43-204ENST00000588687 OR5AL1P0C617 328 aa11.74□□□□□ -0.53
CCDC43-204ENST00000588687 CNBPP62633 177 aaKnown RBP11.74□□□□□ -0.53
CCDC43-204ENST00000588687 Q6ZRU5 148 aa11.73□□□□□ -0.53
CCDC43-204ENST00000588687 ZNF471Q9BX82 626 aaPredicted RBP11.73□□□□□ -0.53
CCDC43-204ENST00000588687 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
CCDC43-204ENST00000588687 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
CCDC43-204ENST00000588687 GAGE6Q13070 117 aa11.72□□□□□ -0.53
CCDC43-204ENST00000588687 IQCJQ1A5X6 159 aa11.72□□□□□ -0.53
CCDC43-204ENST00000588687 TMEM97Q5BJF2 176 aa11.72□□□□□ -0.53
CCDC43-204ENST00000588687 CST9LP1Q5W188 147 aa11.72□□□□□ -0.53
CCDC43-204ENST00000588687 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
CCDC43-204ENST00000588687 PAGE4O60829 102 aa11.71□□□□□ -0.53
CCDC43-204ENST00000588687 DERL1Q9BUN8 251 aa11.71□□□□□ -0.53
CCDC43-204ENST00000588687 TRBV25-1A0A075B6N4 114 aa11.7□□□□□ -0.54
CCDC43-204ENST00000588687 SLPIP03973 132 aa11.7□□□□□ -0.54
CCDC43-204ENST00000588687 C20orf203Q8NBC4 194 aa11.7□□□□□ -0.54
CCDC43-204ENST00000588687 CLRN3Q8NCR9 226 aa11.7□□□□□ -0.54
CCDC43-204ENST00000588687 STOML3Q8TAV4 291 aa11.7□□□□□ -0.54
CCDC43-204ENST00000588687 IGLV10-54A0A075B6I4 117 aa11.69□□□□□ -0.54
CCDC43-204ENST00000588687 REG3AQ06141 175 aa11.69□□□□□ -0.54
CCDC43-204ENST00000588687 SPANXN1Q5VSR9 72 aa11.69□□□□□ -0.54
CCDC43-204ENST00000588687 GFRA4Q9GZZ7 299 aa11.69□□□□□ -0.54
CCDC43-204ENST00000588687 A0A0D9SG52 128 aa11.68□□□□□ -0.54
CCDC43-204ENST00000588687 F5H697 171 aa11.68□□□□□ -0.54
CCDC43-204ENST00000588687 M0QY20 66 aa11.68□□□□□ -0.54
CCDC43-204ENST00000588687 CHTF8P0CG12 524 aa11.68□□□□□ -0.54
CCDC43-204ENST00000588687 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.68□□□□□ -0.54
CCDC43-204ENST00000588687 SPACA4Q8TDM5 124 aa11.68□□□□□ -0.54
CCDC43-204ENST00000588687 AP1S3Q96PC3 154 aa11.68□□□□□ -0.54
CCDC43-204ENST00000588687 S100A9P06702 114 aaKnown RBP11.67□□□□□ -0.54
CCDC43-204ENST00000588687 IGLV4-60A0A075B6I1 120 aa11.66□□□□□ -0.54
CCDC43-204ENST00000588687 A0A087WYN8 130 aa11.66□□□□□ -0.54
CCDC43-204ENST00000588687 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
CCDC43-204ENST00000588687 hDV102S1A0JD36 115 aa11.66□□□□□ -0.54
CCDC43-204ENST00000588687 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
CCDC43-204ENST00000588687 ARPC5O15511 151 aa11.65□□□□□ -0.54
CCDC43-204ENST00000588687 MBD3L1Q8WWY6 194 aa11.65□□□□□ -0.54
CCDC43-204ENST00000588687 RNF185Q96GF1 192 aa11.65□□□□□ -0.54
CCDC43-204ENST00000588687 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 A0A1B0GUV1 79 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 P01737 135 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 IGLC6P0CF74 106 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 SSTP61278 116 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 PLAC8Q9NZF1 115 aa11.64□□□□□ -0.55
CCDC43-204ENST00000588687 SMIM17P0DL12 118 aa11.62□□□□□ -0.55
CCDC43-204ENST00000588687 C15orf56Q8N910 161 aa11.62□□□□□ -0.55
CCDC43-204ENST00000588687 SFT2D1Q8WV19 159 aa11.62□□□□□ -0.55
CCDC43-204ENST00000588687 A0A1B0GV50 99 aa11.61□□□□□ -0.55
CCDC43-204ENST00000588687 PHOX2AO14813 284 aa11.61□□□□□ -0.55
CCDC43-204ENST00000588687 GZMBP10144 247 aa11.61□□□□□ -0.55
CCDC43-204ENST00000588687 RPL35P42766 123 aaKnown RBP11.61□□□□□ -0.55
CCDC43-204ENST00000588687 FAM213BQ8TBF2 198 aa11.61□□□□□ -0.55
CCDC43-204ENST00000588687 TMEM243Q9BU79 118 aa11.61□□□□□ -0.55
CCDC43-204ENST00000588687 PFDN1O60925 122 aa11.6□□□□□ -0.55
CCDC43-204ENST00000588687 MGPP08493 103 aa11.6□□□□□ -0.55
CCDC43-204ENST00000588687 NKX2-5P52952 324 aaPredicted RBP11.6□□□□□ -0.55
CCDC43-204ENST00000588687 TMUB2Q71RG4 321 aa11.6□□□□□ -0.55
CCDC43-204ENST00000588687 C11orf52Q96A22 123 aa11.6□□□□□ -0.55
CCDC43-204ENST00000588687 PGLYRP4Q96LB8 373 aa11.6□□□□□ -0.55
CCDC43-204ENST00000588687 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
CCDC43-204ENST00000588687 H7C1H1 209 aa11.59□□□□□ -0.55
CCDC43-204ENST00000588687 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
CCDC43-204ENST00000588687 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
CCDC43-204ENST00000588687 KRTAP3-2Q9BYR7 98 aa11.59□□□□□ -0.55
CCDC43-204ENST00000588687 C19orf71A6NCJ1 209 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 UMAD1C9J7I0 102 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 SMLR1H3BR10 107 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 RAB5CP51148 216 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 ZNF345Q14585 488 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 ODF1Q14990 250 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 KCNRGQ8N5I3 272 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 AP5S1Q9NUS5 200 aa11.58□□□□□ -0.56
CCDC43-204ENST00000588687 RASL11AQ6T310 242 aa11.57□□□□□ -0.56
CCDC43-204ENST00000588687 PRR3P79522 188 aaKnown RBP11.56□□□□□ -0.56
CCDC43-204ENST00000588687 CENPWQ5EE01 88 aa11.56□□□□□ -0.56
CCDC43-204ENST00000588687 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
CCDC43-204ENST00000588687 TPPP3Q9BW30 176 aa11.56□□□□□ -0.56
CCDC43-204ENST00000588687 CACNG7P62955 275 aa11.55□□□□□ -0.56
CCDC43-204ENST00000588687 COX6A2Q02221 97 aa11.55□□□□□ -0.56
CCDC43-204ENST00000588687 OR2D3Q8NGH3 330 aa11.54□□□□□ -0.56
CCDC43-204ENST00000588687 PRSS3P2Q8NHM4 247 aa11.54□□□□□ -0.56
CCDC43-204ENST00000588687 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms